mRNA_L-elsbetiae_contig5300.13461.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5300.13461.1
Unique NamemRNA_L-elsbetiae_contig5300.13461.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: D7FLD6_ECTSI (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLD6_ECTSI)

HSP 1 Score: 724 bits (1868), Expect = 9.650e-259
Identity = 350/405 (86.42%), Postives = 384/405 (94.81%), Query Frame = 2
Query:    2 RSMLKKGKLDIPNDMGVGTMAWGDEKAGFVSDPKYKPKDGEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGRPLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAPKYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDAYKANTGGKTIKRGKERDPMKRQALTL-KKTRGWASQDWYKEDE 1213
            RSMLKKGKL+IPN MGVGTMAWGD+K GFVSDPKYKPK+GEFNPADLQGAY+TL+DAGITFFDTSDVYGYKSS  G+SAEQLLGRFAEENGRPL+GAKYMP+ WT+FLIGGPWRAGRRA+AKALT+TLE+GGWAYVDLYQVHFPFPY GGMDALAEGLS+ACDRGLCRSVGVSNFNA+QMREFSEKL K+GITLASNQFEYSLVNRDAE DGTLAECKRLGVVPL HTPLAKGLATGVYTASNPTGGKMG PKY+FKDLFP+TPI+TAL AVAKRVEGRL+ EAKEEQ+RAFEAL D EEQAPPP+LKKISTTQVA+NYVRAKGVVPLPGVKT+AHADEIVGCLGW L+ EDV IL+AAHDAYK +TGGKTI+RGK+RDPMKRQA++  +K+ GWASQDWYKE++
Sbjct:   57 RSMLKKGKLEIPNYMGVGTMAWGDKKVGFVSDPKYKPKEGEFNPADLQGAYNTLMDAGITFFDTSDVYGYKSSPEGFSAEQLLGRFAEENGRPLIGAKYMPIFWTKFLIGGPWRAGRRAIAKALTATLEKGGWAYVDLYQVHFPFPYFGGMDALAEGLSRACDRGLCRSVGVSNFNAQQMREFSEKLGKHGITLASNQFEYSLVNRDAETDGTLAECKRLGVVPLGHTPLAKGLATGVYTASNPTGGKMGDPKYLFKDLFPVTPIHTALAAVAKRVEGRLAEEAKEEQRRAFEALEDGEEQAPPPQLKKISTTQVAINYVRAKGVVPLPGVKTKAHADEIVGCLGWSLLPEDVAILEAAHDAYKVSTGGKTIQRGKDRDPMKRQAISFGQKSGGWASQDWYKEED 461          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A835Z353_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z353_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 8.910e-131
Identity = 206/385 (53.51%), Postives = 273/385 (70.91%), Query Frame = 2
Query:    2 RSMLKK-GKLDIPNDMGVGTMAWGDEKAGFVSDPKYKPK--DGEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEEN---GRPLVGAKYMPVLWTRFLIGGPW-RAGRRAVAKALTSTLERGGWAYVDLYQVHFPFP-YLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQ--MREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAPKYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKKISTTQ-VALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDAYKANTGGKTIKR 1123
            +S+L +  K ++P+++G GT+AWGD + GF+ DPK +PK   GEFNPADLQGA++T++++G+ FFDT++ YG KS K G SAEQLLGRF +E+    RP+VGAKY PVLW    +GG   RAGRRAV KAL  +L+R G AYVDLY +HFP   Y+GG+ ALAEGL++A +RGLCR VGV N N  Q  +R+F EKL K+ + L +NQ EYSL ++ A  DGT+AECKR G++  AHTPL +GLATGV TAS+PTGG+ GAP+YVF+DL PL P++ AL AVA     RLS                 +E AP   ++K++TTQ +++NY+RAKG+VPLPG+  R  A E+ GCLGW L  E+V++LD A+  YKA  GG  +KR
Sbjct:   31 KSLLSRVAKFEVPHEIGTGTLAWGDSERGFIGDPKQRPKAAQGEFNPADLQGAFETMLESGLAFFDTAETYGSKSIKDGMSAEQLLGRFIQESQADARPMVGAKYTPVLWPGAAVGGLLPRAGRRAVVKALQRSLDRLGLAYVDLYSLHFPTGRYIGGLGALAEGLAQARERGLCRHVGVCNMNGAQASVRDFKEKLAKFDVPLIANQIEYSLADQTAAEDGTIAECKRQGILVFAHTPLGRGLATGVNTASDPTGGRPGAPRYVFRDLEPLLPVHQALAAVATMASSRLS----------------QDESAP---IRKVTTTQQISINYIRAKGLVPLPGITNRKQALEVAGCLGWRLNGEEVEMLDDAYQQYKAKAGGAVVKR 396          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7S2SPM1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPM1_9STRA)

HSP 1 Score: 312 bits (799), Expect = 7.330e-97
Identity = 173/371 (46.63%), Postives = 224/371 (60.38%), Query Frame = 2
Query:   20 GKLDIPNDMGVGTMAWGDEKAGFVSDPKYKPKDGEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGR--PLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAPKYVFKDLFP----LTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDAYKANTGGKT 1114
            G L IPN +GVGT+AWG+ K GF+S         ++NP DLQ  YDTL++ G++FFDT+DVYG+K  + G+S EQLLG F   NG    +V  KY P L+T   +GG  RAGRRAV  AL  +LER   ++VD+YQ+HFPFPY+GG  AL EGL+   + GLC +VGV NFNA+Q+    E+ E  G+ L SNQ ++SL++     DGT+  C+RL +  LAH+PLA GLA+G YTA NPTGG     K  +K   P    L P++  L  VA+ V  R                          + KKIS  QVALNYV AKG VPLPGV T   ADE+VGC+GW L  +DV  L+ A  A K++   +T
Sbjct:  139 GSLSIPNGIGVGTLAWGEAKRGFMS---------KYNPGDLQVTYDTLLEGGVSFFDTADVYGHKYLRDGHSTEQLLGEFNARNGEHSAMVATKYTPKLFTNLRVGGGLRAGRRAVVAALEQSLERLDRSFVDVYQLHFPFPYIGGNRALIEGLAMCKEEGLCDAVGVCNFNARQIEVAYERFEDCGVPLVSNQVKFSLLHPKPLQDGTIKTCRRLDITVLAHSPLAGGLASGRYTAMNPTGGDFVKNKLQYKYPLPRLQRLAPLHAGLEDVARSVAAR--------------------------ERKKISPAQVALNYVAAKGAVPLPGVTTPKDADEVVGCVGWSLKPKDVKKLEKAVRACKSSQAVRT 474          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7R9ZHW1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHW1_9STRA)

HSP 1 Score: 288 bits (738), Expect = 3.140e-87
Identity = 166/364 (45.60%), Postives = 224/364 (61.54%), Query Frame = 2
Query:   17 KGKLDIPNDMGVGTMAWGDEKAGFVSDPKYKPKD---GEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGR--PLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAP-KYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKK-ISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDA 1087
            + +  IPN +G GT AWG+E+ GF    K K KD   G +   DLQ +YDTL+++GI F DTS+ YG    K   S+E ++GR  +EN R  PLV + +    W   L GG  R GRR V  AL  T ER G + V+LYQV     YLG  +ALA+GLS+  D+GLC  VGV N    +MR  ++K+E+ G +L SNQF++SL NR A   G +  CK +GV+P+AHTPL  GLATGVY+++NP+GGK G    Y  K L    P+ + +  V  +V+ RL  E ++EQ R           A P  +   ++TTQ+A+NYV AKG VP+PGVKT A A+E++GCLGW L  E+V +LD+A DA
Sbjct:  167 ENEFHIPNRIGFGTAAWGNERKGFKVGKKLKKKDIKAGRYLAGDLQLSYDTLMESGIVFVDTSESYGRALEKKSLSSEHIVGRCVDENARVDPLVASTFANP-WMHLLEGGGVRFGRRGVVNALEQTCERLGVSGVELYQVPAAL-YLGFPNALADGLSECLDKGLCNYVGVCNMGKLRMRSMAKKMERRGASLTSNQFKFSLTNRKAWKSGLIGACKDIGVIPIAHTPLDGGLATGVYSSTNPSGGKAGGKFPYELKTLNKWQPLTSMMQTVQSKVKTRLEREKRDEQSRYKRG-------AQPRDINTDVTTTQIAINYVVAKGCVPIPGVKTVAQAEEVLGCLGWGLNDEEVQLLDSAADA 521          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7S1ZER9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZER9_TRICV)

HSP 1 Score: 268 bits (684), Expect = 1.400e-81
Identity = 158/344 (45.93%), Postives = 211/344 (61.34%), Query Frame = 2
Query:   86 FVSDPKYKPKD---GEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGR--PLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAP-KYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAF----EALGDDEEQAPPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDA 1087
            F S  K K KD   G +   DLQ AY+TL+++G+TF DTS+ YG K +K   SAE +LGR  ++N    PLV + +    W   L GG  R GRR+V KAL  T ER G + ++LYQV     YLG  +ALA+GLS   DRGLC  VGV+N    +MR  + K+E+ G +L SNQF +SL NR A   G ++ CK LGV+P AHTPL  GLATG+YT +NP+GGK G    Y  K L  + P+   +  V  +V+ RL  E ++EQ R      + +G+             +TTQ+ALNYV AKG VP+PG+KT A A+E++GCLGW L +E+V +LD+A DA
Sbjct:    1 FSSKKKLKKKDLRGGMYLAGDLQMAYNTLLESGVTFVDTSESYGSKMAKKSLSAEHILGRCIDDNPAIDPLVASTFANP-WMHILNGGGVRFGRRSVVKALEQTCERLGTSSIELYQVPAAL-YLGFPNALADGLSDCLDRGLCNYVGVTNMGKYRMRSMARKMERRGASLTSNQFAFSLTNRKAWKSGLISACKDLGVIPFAHTPLDGGLATGLYTNTNPSGGKAGGNFPYDLKKLNRIQPLTGMMETVQSKVKSRLQREKRDEQSRMKGYRDQPMGNINTDP--------TTTQIALNYVVAKGCVPIPGIKTVAQAEEVLGCLGWGLTEEEVQLLDSAADA 334          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7S1TWF0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWF0_9STRA)

HSP 1 Score: 257 bits (656), Expect = 4.840e-76
Identity = 161/371 (43.40%), Postives = 212/371 (57.14%), Query Frame = 2
Query:   14 KKGKLDIPNDMGVGTMAWGDEKAGFVS-----DPKYKPKDGE--FNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGR-PL-VGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFP-YLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAPKYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDAYKA 1096
            +K   D+ + MGVGTMAWG+   GFV+         +   G+  F   DL  AY  LV+ G+ FF+T++VYG  S+   + AEQLLG+F ++N + P  +    MP L  R   GG  R GRR V  ++  +L+R G  Y  L Q+  P   Y+GG   LA GL+ A  RGL   VGV N NAK + +    L+K GI LA+NQ E SL N+DA  DGT+  CKRLGV  LA +PL  GLATGVYT  NP+GG+ G PK+  ++L P   ++T L  +AK V  RL     EEQ        DD           ++ TQV+LN+VRAKG VPLPGVKT  HA E++  L W L +++VD LD    A +A
Sbjct:  104 RKKSFDVASGMGVGTMAWGEAGVGFVTGTGGTSTGQRKTFGKSLFAAGDLAAAYKVLVEGGVDFFETNEVYGLGSAGENHQAEQLLGQFRQQNPKFPADIAITVMPSL--RDPHGGGLRFGRRGVLASIQGSLDRQGVGYAKLVQLGAPGKTYIGGRGKLAAGLAMAKQRGLVEHVGVVNHNAKDLEKMHGLLKKEGIDLATNQIELSLTNQDALFDGTIGACKRLGVKVLASSPLGGGLATGVYTVGNPSGGRGGKPKFTPQELVPFNRLHTELEQIAKEVSARL-----EEQ--------DD-----------VTPTQVSLNWVRAKGAVPLPGVKTEKHAKEVLESLKWSLTRKEVDRLDRVAQAARA 448          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7S2JAA3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JAA3_9EUKA)

HSP 1 Score: 252 bits (643), Expect = 4.480e-75
Identity = 148/344 (43.02%), Postives = 194/344 (56.40%), Query Frame = 2
Query:   44 MGVGTMAWGDEKAGFVSDPKYKPKDGEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGRPLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYT-ASNPTGGKMGA-PKYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDIL 1069
            +GVGTM+WGD   G+            FN  DL  A+D L++ G+  FDTS+VYGY+  +L  ++EQLL    E    PL+  K+MPV WT  L GG  R GR+AV +A  +++ R G   +DLY +H P PYLGG  AL EGL++A D GLCR VGV N+NA Q+RE   +  + G+ L +NQF YSL N + E DGTL  C  LGV P+AHTPLA GLA+  Y  A + +GG+ G   ++  + L  L+PIY A+      V G L          A E+ G  E              QVAL Y  AKG +P+PGV   A A ++V  LGWEL   +V  L
Sbjct:   45 IGVGTMSWGDPLRGWGQ---------RFNSTDLSEAFDVLLEGGVNMFDTSEVYGYQGRRLHETSEQLLSSLIETRQPPLISTKFMPVPWTHLLAGGGLRFGRQAVVQAARNSIVRLGVGQLDLYSLHAPIPYLGGRRALFEGLAEAYDLGLCRGVGVCNYNAAQVREAYLECRRLGVPLVANQFRYSLFNVERELDGTLETCLELGVAPIAHTPLAGGLASTRYAHALSRSGGQRGRIGRFDSRLLHMLSPIYEAM----SHVGGELG---------AAESNGHSE-------------AQVALAYTMAKGCIPVPGVNNGAQARDVVAALGWELELNEVAAL 353          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7S3PZQ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZQ1_9STRA)

HSP 1 Score: 251 bits (641), Expect = 7.750e-73
Identity = 151/361 (41.83%), Postives = 210/361 (58.17%), Query Frame = 2
Query:   26 LDIPNDMGVGTMAWGDEKAGFVSDPKYKPKD---GEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEEN--GRPLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYG-ITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAPK-YVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQ-APPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHD 1084
            L I N +G  T AWGD   GF +  K K KD   G+F   DLQ AYD L+D GITF DTS+ YG  S     SAEQ+L +  + N    P++G+  M   W   + G   R GR A+ K + ++ ER G + +D+YQV     Y+G    +A  L  A D+GL  +VGVS  +  +M  F++KL   G  +L SNQFE+SLVNR A   G ++ CK LG++P+A  PL  GLA+GV++A+NPTGG++   + + FK L   T ++  L  V  +V+ RL  E          AL D  ++    P   ++STTQ+A+NYV AKG VP+P VK    ADE++GCLGW L+ ++V +LD A D
Sbjct:  180 LHITNRIGFTTKAWGDVDEGFKAGKKLKKKDIKRGKFLAGDLQVAYDKLMDNGITFIDTSENYGLVSRPKSLSAEQILFQCMDTNVDSSPIIGST-MSNPWKSVVQGTGVRFGRSAILKTIEASAERLGTSAIDVYQVPSKMFYVGAPKTVASALCMAMDQGLINNVGVSGMSKSRMSSFNKKLNSIGSYSLTSNQFEFSLVNRKAFKSGLISACKSLGIIPVARNPLGNGLASGVWSATNPTGGEVSKKQPFDFKTLDKYTTLHDMLATVQMKVQKRLEKENN--------ALKDRRDRYGGAPMNTEVSTTQIAINYVVAKGCVPMPSVKNPKEADELIGCLGWSLLDDEVKMLDDAAD 531          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A7S1FNC9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FNC9_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.810e-69
Identity = 146/378 (38.62%), Postives = 214/378 (56.61%), Query Frame = 2
Query:   23 KLDIPNDMGVGTMAWGDEKAGF----------VSDPKYKPKDGEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEEN-------GRPLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFP-FPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKL-EKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGA--PKYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPK---LKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHD 1084
            K ++PN +G G++AWGD   GF          VS          F+  DL+ AY TL+  GI+F DT + YG K      S+E L+GR            G+P++  K++P L +R       RAG  AV +A  ++ +R     +DLYQ+  P + Y GG  AL  GL+     GLCR VGVSN NAK+++ F ++L + +GI LA+NQ   SLVNR    DGT+  C+++GV  +AHTPLA GLA+G+YT +NPTGG   A   K+  KDL    PI+ AL  V    + R+  E + + K+A +    +  +   PK   +  ++  QV++N+VRAKG VP+PG+K +  A+E++ CL +EL  ++V +LD A D
Sbjct:   59 KFEVPNGIGFGSLAWGDVDRGFMPTRSSFYQGVSTTSGLNSMDSFDVNDLEDAYLTLLRGGISFADTCESYGAKMRNRKLSSEHLIGRIRSSCLGREKGIGQPILSNKFVPKLMSRSFDAFDVRAGSDAVLRACRASADRMEVGVIDLYQLSAPTYLYAGGRTALIAGLAGCVQSGLCRRVGVSNMNAKKVQHFYDRLRDDHGIRLATNQVSLSLVNRKVIFDGTVDYCEKMGVTVVAHTPLAGGLASGLYTEANPTGGDRTARLDKFNMKDLRKFAPIHEALDVVCDMCDRRVKKELRAKMKQAKDLAERNPRKFQKPKDKVINDVTPAQVSINWVRAKGAVPIPGIKNKQDANELLDCLRFELTDDEVAMLDRAAD 436          
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Match: A0A6S8ZUI1_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZUI1_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.760e-69
Identity = 145/368 (39.40%), Postives = 206/368 (55.98%), Query Frame = 2
Query:   26 LDIPNDMGVGTMAWGDEKAGFVSDPKYKPKD---GEFNPADLQGAYDTLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGR----PLVGAKYMPVLWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVH-FPFPYLGGMDALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYSLVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKM-GAPKYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQAPPPKLKK-ISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQEDVDILDAAHDAYKAN 1099
            L IPN +   T  WGD+  GF    K K K+   G F   D+Q AY+TL  AG+ F  TS+ +G  S     SAEQ++ R +EE  +    P++   +     +        R G + V  AL ++ ER     ++LYQ+      Y GG  A+A GL+KA D GLC  VGVSN+++++MR FS KL K G+ L SNQF++SL NR A   G +  CK  GV+P A  PL  GLATG+YT+SNP+G +  G  +Y  K L     +++   A+A RV+ R+   + E+  R F        + PPPK+   I+TTQ+A+NY+ AKG VP+  + T   A+E++GC+GW L  E+V  LD A D  + N
Sbjct:  141 LHIPNRLAWTTERWGDKSKGFKQGSKLKKKEVRSGMFLAGDMQAAYNTLTQAGLPFLFTSETFGASSRNSKLSAEQVIARCSEEATQDSMDPIIAGTFANPWISLLKRSSGLRYGAQGVVSALEASCERMDQTGIELYQIGGSKLFYPGGSGAIATGLAKAVDLGLCNHVGVSNYSSRKMRSFSRKLGKRGVQLTSNQFDFSLTNRKALKSGLIKSCKAQGVIPFASNPLDNGLATGIYTSSNPSGSEADGRFQYPLKVLDKWAELHSVQEALAVRVKTRVQRTSMED--REFRGY-----RGPPPKINTDITTTQIAMNYIVAKGCVPVVSIATPKQAEELIGCMGWSLTDEEVQELDNAADLCEMN 501          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5300.13461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD6_ECTSI9.650e-25986.42Aldo_ket_red domain-containing protein n=2 Tax=Ect... [more]
A0A835Z353_9STRA8.910e-13153.51NADP-dependent oxidoreductase domain-containing pr... [more]
A0A7S2SPM1_9STRA7.330e-9746.63Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9ZHW1_9STRA3.140e-8745.60Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1ZER9_TRICV1.400e-8145.93Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S1TWF0_9STRA4.840e-7643.40Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2JAA3_9EUKA4.480e-7543.02Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A7S3PZQ1_9STRA7.750e-7341.83Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1FNC9_9STRA1.810e-6938.62Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6S8ZUI1_9STRA2.760e-6939.40Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5300contigL-elsbetiae_contig5300:7539..12135 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score723.8
Seed ortholog evalue4.5e-206
Seed eggNOG ortholog2880.D7FLD6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG0667@1,KOG1575@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionNADP-dependent oxidoreductase domain
Ec32 orthologEc-12_007760.1
Exons9
Model size1680
Cds size1209
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816549.2557201-UTR-L-elsbetiae_contig5300:7538..80021622816549.2557201-UTR-L-elsbetiae_contig5300:7538..8002Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5300 7539..8002 -
1691683639.897633-UTR-L-elsbetiae_contig5300:7538..80021691683639.897633-UTR-L-elsbetiae_contig5300:7538..8002Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5300 7539..8002 -
1622816549.3663793-UTR-L-elsbetiae_contig5300:12128..121351622816549.3663793-UTR-L-elsbetiae_contig5300:12128..12135Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5300 12129..12135 -
1691683640.0212145-UTR-L-elsbetiae_contig5300:12128..121351691683640.0212145-UTR-L-elsbetiae_contig5300:12128..12135Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5300 12129..12135 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816549.2678967-CDS-L-elsbetiae_contig5300:8002..81341622816549.2678967-CDS-L-elsbetiae_contig5300:8002..8134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 8003..8134 -
1691683639.9181156-CDS-L-elsbetiae_contig5300:8002..81341691683639.9181156-CDS-L-elsbetiae_contig5300:8002..8134Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 8003..8134 -
1622816549.278253-CDS-L-elsbetiae_contig5300:8316..84371622816549.278253-CDS-L-elsbetiae_contig5300:8316..8437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 8317..8437 -
1691683639.932839-CDS-L-elsbetiae_contig5300:8316..84371691683639.932839-CDS-L-elsbetiae_contig5300:8316..8437Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 8317..8437 -
1622816549.287507-CDS-L-elsbetiae_contig5300:8776..89251622816549.287507-CDS-L-elsbetiae_contig5300:8776..8925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 8777..8925 -
1691683639.9458756-CDS-L-elsbetiae_contig5300:8776..89251691683639.9458756-CDS-L-elsbetiae_contig5300:8776..8925Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 8777..8925 -
1622816549.3029516-CDS-L-elsbetiae_contig5300:9077..92291622816549.3029516-CDS-L-elsbetiae_contig5300:9077..9229Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 9078..9229 -
1691683639.9583416-CDS-L-elsbetiae_contig5300:9077..92291691683639.9583416-CDS-L-elsbetiae_contig5300:9077..9229Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 9078..9229 -
1622816549.3142061-CDS-L-elsbetiae_contig5300:9562..96861622816549.3142061-CDS-L-elsbetiae_contig5300:9562..9686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 9563..9686 -
1691683639.970875-CDS-L-elsbetiae_contig5300:9562..96861691683639.970875-CDS-L-elsbetiae_contig5300:9562..9686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 9563..9686 -
1622816549.325124-CDS-L-elsbetiae_contig5300:10337..104541622816549.325124-CDS-L-elsbetiae_contig5300:10337..10454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 10338..10454 -
1691683639.9800768-CDS-L-elsbetiae_contig5300:10337..104541691683639.9800768-CDS-L-elsbetiae_contig5300:10337..10454Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 10338..10454 -
1622816549.3362937-CDS-L-elsbetiae_contig5300:10891..110411622816549.3362937-CDS-L-elsbetiae_contig5300:10891..11041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 10892..11041 -
1691683639.989761-CDS-L-elsbetiae_contig5300:10891..110411691683639.989761-CDS-L-elsbetiae_contig5300:10891..11041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 10892..11041 -
1622816549.3462837-CDS-L-elsbetiae_contig5300:11652..117781622816549.3462837-CDS-L-elsbetiae_contig5300:11652..11778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 11653..11778 -
1691683640.0001142-CDS-L-elsbetiae_contig5300:11652..117781691683640.0001142-CDS-L-elsbetiae_contig5300:11652..11778Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 11653..11778 -
1622816549.357155-CDS-L-elsbetiae_contig5300:11990..121281622816549.357155-CDS-L-elsbetiae_contig5300:11990..12128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 11991..12128 -
1691683640.0105586-CDS-L-elsbetiae_contig5300:11990..121281691683640.0105586-CDS-L-elsbetiae_contig5300:11990..12128Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5300 11991..12128 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5300.13461.1prot_L-elsbetiae_contig5300.13461.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5300 8003..12128 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5300.13461.1

>prot_L-elsbetiae_contig5300.13461.1 ID=prot_L-elsbetiae_contig5300.13461.1|Name=mRNA_L-elsbetiae_contig5300.13461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=403bp
MLKKGKLDIPNDMGVGTMAWGDEKAGFVSDPKYKPKDGEFNPADLQGAYD
TLVDAGITFFDTSDVYGYKSSKLGYSAEQLLGRFAEENGRPLVGAKYMPV
LWTRFLIGGPWRAGRRAVAKALTSTLERGGWAYVDLYQVHFPFPYLGGMD
ALAEGLSKACDRGLCRSVGVSNFNAKQMREFSEKLEKYGITLASNQFEYS
LVNRDAEADGTLAECKRLGVVPLAHTPLAKGLATGVYTASNPTGGKMGAP
KYVFKDLFPLTPIYTALVAVAKRVEGRLSIEAKEEQKRAFEALGDDEEQA
PPPKLKKISTTQVALNYVRAKGVVPLPGVKTRAHADEIVGCLGWELVQED
VDILDAAHDAYKANTGGKTIKRGKERDPMKRQALTLKKTRGWASQDWYKE
DE*
back to top

mRNA from alignment at L-elsbetiae_contig5300:7539..12135-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5300.13461.1 ID=mRNA_L-elsbetiae_contig5300.13461.1|Name=mRNA_L-elsbetiae_contig5300.13461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4597bp|location=Sequence derived from alignment at L-elsbetiae_contig5300:7539..12135- (Laminarionema elsbetiae ELsaHSoW15)
CAGGAGCATGCTCAAGAAGGGTAAGCTCGATATCCCCAACGACATGGGCG TCGGCACGATGGCTTGGGGAGACGAGAAGGCAGGGTTCGTGAGCGATCCC AAGTACAAGCCGAAGGATGGCGAGTTCAACCCGGCCGACCTCCAGGTGTG TGCTCGCGCATGGAAACACGCGTGCCGATGTAAACTGTAGATATGTTTAC AATATGCGGCAGGTGCGACCTAGACTATATGGCAGCTAGCTCATGATGCA CTCTTGGTTGGCGCGCCCCTCACGGCCGCACACCTCTTTTGATACAAATC GTCCTTGGGGCCCACACCGCACCTCTTTCATCGTTTTATTTTGCCATCTT CCAACAGGGGGCGTACGACACGCTGGTCGACGCCGGGATCACGTTTTTCG ACACCTCAGATGTGTACGGGTACAAATCGTCCAAGTTAGGCTACAGTGCG GAGCAACTTTTGGGACGATTTGCCGAGGAAAACGTGAGTAAAATATTCGC TGTAAATCGTGTGAAGTGGATGCGAGGAAGTAGCACTGCACGACAGCGAT CGCCGCGAAATGCAGGACTAGCTAAAGAAGGCAGCTGGACTGCAGACGGG AACTATTAAAATTATCGAGATGTGTGGGACGACGTCGAAGCTACATATAT ATCGAAGTGCGCGGGTGTGACTCGACCCGGGAGACATCGCGCCTAGCGGC CCAGTAGATAGATGTTTACGATCGGCTGTGGTTTGGATCGCCGAGCCCTG GAGGCTCAAATCTGTCAAAAAGTCGGCAGTACAGATTCCGTGCTAAGGCC CGCGTGTTGGGCACATTTGGCGGTAGGTACGTAGGTACGTAGCTGCGATA TCAAATGCAATTTTTCTGGTGCTTCTGTCGCCCAAGATAAAGTAAAAGGC TCGGTTACCGTTTGCGCGGCACCAAAGCATGAGGCTGCTTCAGTGGTGAA TCTGCTGCTGGAAAACAACTAGACTCCGAACGAAGTTACTCCGTCTGAAC GGCCTCCCTCCCTTTCCCTCCTTCCCCCCCTTATTGTGCGACATAACTGG ATACATCCAATGCACAACGTCCGTCCCGAATTCTCGTGCGCCAGGGCCGC CCCTTAGTCGGGGCTAAGTACATGCCCGTACTTTGGACCAGGTTTCTCAT CGGCGGTCCTTGGAGGGCGGGGCGGCGAGCAGTGGCCAAGGCTTTGACCT CCACGCTGGAACGGGGTGGGTGGGCATACGTGGATCTATACCAGGTAAGC TGCTGCCACCTCCCTGTACGCACGTGTTCGTTTTTTTCCATGTTGGGACG GGGTTCCGCGGATGGTCCGGCGTGCACGGAGTTTGCTGCTGCCTTACGTC TTGGATTCTCCCCGCACTGCCCTGCTTGTGTGTCGGGGCGGTGGTCGTTC GTGGCGGACCTCGCGCGTGCTGACACCTCGGCACGTGTTCTCGCAGCATT GCAAGATTATTCAGATATTAGTTGCGTAGCAGGGTTATTTTTTGTCATTG TCGGCGTTGTTGCTCAAGCAAGAGGGGAACCCATCCCACGGAGTTCCTTT CGCTTCGCCGTCTTAAGCAAGCGTAGCTGTACAGCCGTTCCGGTGCCAAC TATTGCTCTCCTGGTGGCGGGTGTCCCCGGTTTACAATGCGTCTTTTCTG CGCACGCGCGGCGGTGGCGCGGGTGCTCTAGGTTCACTTTCCGTTCCCGT ACCTTGGAGGGATGGACGCTTTGGCCGAAGGGCTGTCGAAAGCCTGCGAT CGAGGGCTGTGCCGCTCGGTGGGAGTCTCCAATTTCAACGCGAAGCAGGT GAACCGTCCGCCATTTCCTCGTGAAACAGCAGCTTCGGGTAGGCAACGGC TAGAAGACGTTTCCACGTCGTCGATGGGAGTGCGCTTGGCTATCTGCACT GAGACATTGAGACAGAGCCGGAGCGGAGCGCCTATCGCTTACCTGGCGGG CTGCGTGCCCCTTGTTCGGCCGGTGTCTCAATCCGAAGGGGGCTGATGCG CGAGTGCGGGAGGGGGGGGAGGGGTATCGAGTGCCGTCTTTTCGTCGTCT TTAGCGTGCATCACCTCGCGGGCATCGTGGCATTTGCATCACACTGCTGT ACATTTGCAAATTTGTGATTTAAAACCTTCGTGGTCTCGTTGTGCACTAC AATACTGTTATCCTCGTTTTTGGCGTTATTGTGCATACGAAGTACCGTAT GTTCGACGCTTTGCCTTCGGATAGACCAAACGCCCCCCGAGGCTTTTTCA AGCAACATGTATGCCTAGATCCATCTCATGAACATCAGCCCTTGTTGACT CTATATGTATATCTGCAACTCTTTCGCTGACGCCTATCCAAGTAGAAGCC TGACCGCCGGTCCGCCGCTTGTGCTGCGCCCGTGTGCTGTCCCTTCCTAT TTTCACGGTGGCGGGGGTTTGCTTGCCTTCACGTTGGTGCAATACGTAGA TGCGCGAGTTCTCGGAGAAACTGGAGAAGTATGGGATCACTCTGGCCTCC AACCAATTCGAGTATTCTCTCGTCAATCGAGATGCTGAGGCAGACGGAAC CTTGGCGGAGTGCAAACGGCTGGGTGAGAGCCAAGCAACTTGTACGCCGA TCCCCACCCGTTTGATCGGTGTTTGGCTTCAAGTATGGGCTGCTTTCGAA ACGAATATAAATAGTCGATGAAACTGCCCACTTGCCCTGTGGCTCAATAT TTCGAGTGCCGGCGCTGTCTTCAGACCACAGCCCCCGAGGTTGGGCAAAC ACTACGTACGATGTGCGCAGATAGAAACCACCACTCTGAACGCTACGCTC CCGATGGCCGTCCCGTTTTGTAGGCGACACAAACTGGAGGGTATACGAGG GAAGCGTTGATCATGCCCGTTCTATTGTATCGCGCTACCGGCCCACCGTT GGACAGGTGTGGTGCCGCTCGCGCACACGCCGCTGGCAAAGGGACTGGCG ACCGGAGTCTACACGGCATCCAATCCGACCGGCGGGAAAATGGGGGCACC GAAATATGTTTTCAAGGACCTCTTCCCCTTGACTCCTATCTACACAGCTC TGGTCGCGGTGAGTGTGATGGTGATTTTCCATTCATTCGTGTATGTACAT ACATGCGTGCACATTCGCAGTATGTCATGAAGCTATTTTTATCTCTCTCT TTCTCCCTGTCTCTTCCAAGCAGCCTTGCAATTCTTCCGTGTTTCGTGCG TGTGGGCCAGGTGGCAAAGCGAGTAGAAGGACGGTTGTCGATCGAGGCCA AGGAGGAGCAGAAGAGGGCCTTTGAGGCTTTAGGGGACGACGAAGAACAA GCACCGCCCCCAAAGCTCAAGAAGATCAGCACCACACAGGTGGCGCTGAA CTACGTCAGGTGAGAGGCGCGCACGCTGGAAGCTCAGGTCAAACCCGTGG ATAGGATATGCCCCCCCTGCATGTGTGGATTCGTTAGCTGGGGCCCCCCG TGTGTTTTCGCTACTCGGTGCTGGTCACTCACTTGTTGTCGATTGACTTA CTTGTGAACTACGTAGATTTTAATTTTGTGCTCTATGTGCATCTTTGGCG ATTTTTCGATGGTGATGCATGTCCTCATGACACAGGATCACTGCTGCGTC CTGCTTATCTCCTCGCACCCGCGCTGTATTCATTCGCGTGCGATGTGTAT TGCTGTGCATGATGCCCTGTCTATCGCCTTTGGGTTTATTTCAACCAGGG CGAAAGGGGTTGTTCCGCTTCCGGGGGTCAAGACAAGAGCGCATGCGGAT GAAATAGTGGGCTGTTTGGGCTGGGAGCTCGTGCAAGAAGACGTGGACAT CCTTGATGCTGCGCATGACGTGAGTTATTAAAAAATCCGCGTTTATCCAG ACCGTCATCGATACTTGTACATACTCCGTAGATGCATCACGGGCACCTAC GTAGTATCGGGCAGCAATGCAGTGGAAGCGATTTTTTAGTTATCTTGTCA GCCAAGATGCTCCTCCTGTTCCTCCCTCGTTCTGTCATCCTGATGCAACA GGCGTACAAGGCCAACACCGGGGGTAAGACAATAAAGCGTGGCAAAGAGC GGGACCCGATGAAGCGGCAGGCCCTAACGCTCAAGAAGACCCGGGGGTGG GCATCGCAGGACTGGTACAAGGAAGACGAGTAAACCCGCGAAACACACGC GTCTTGTACCTTTGGCCCAGCCCACATTTTACCGTAGTTTGGAGGCACCC ATGTCGCGGCCCATCTGTAAGGAGCTAGGAGGTAGGTACGTATGTACAAT AGCTCAGCTTGGTTTCCCATCAGTCCTTCGGCGTGGCCTGTGTCTCGCTA GACCTGCAGTTCAGTCGTAGTCACAGGAGGAGGTGCGCGGGTGGCTGCCT TACTTAGTTGGTGCAAAGACGCACTTTGATCGTGGGTGAGTCACCCTGCA AAATCTCGATAGTACAGTAGTACATAGGAGGGTTACATCTCCCCTTTACC CTTGTTTTCGACGAAACAACCTGCTTTTCTAGTAGACCAGAAGATACATG ACCTTTCTTGTAGGTGTGTTACTGTTTATTTTTTCGTTTGGATACCCGAG AGGTATTTCACCTAAACTCAGATGAGGATCCATTATCTATAAGTGGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5300:7539..12135-

>mRNA_L-elsbetiae_contig5300.13461.1 ID=mRNA_L-elsbetiae_contig5300.13461.1|Name=mRNA_L-elsbetiae_contig5300.13461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2418bp|location=Sequence derived from alignment at L-elsbetiae_contig5300:7539..12135- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCAAGAAGGGTAAGCTCGATATCCCCAACGACATGGGCGTCGGCAC
GATGGCTTGGGGAGACGAGAAGGCAGGGTTCGTGAGCGATCCCAAGTACA
AGCCGAAGGATGGCGAGTTCAACCCGGCCGACCTCCAGATGCTCAAGAAG
GGTAAGCTCGATATCCCCAACGACATGGGCGTCGGCACGATGGCTTGGGG
AGACGAGAAGGCAGGGTTCGTGAGCGATCCCAAGTACAAGCCGAAGGATG
GCGAGTTCAACCCGGCCGACCTCCAGGGGGCGTACGACACGCTGGTCGAC
GCCGGGATCACGTTTTTCGACACCTCAGATGTGTACGGGTACAAATCGTC
CAAGTTAGGCTACAGTGCGGAGCAACTTTTGGGACGATTTGCCGAGGAAA
ACGGGGCGTACGACACGCTGGTCGACGCCGGGATCACGTTTTTCGACACC
TCAGATGTGTACGGGTACAAATCGTCCAAGTTAGGCTACAGTGCGGAGCA
ACTTTTGGGACGATTTGCCGAGGAAAACGGCCGCCCCTTAGTCGGGGCTA
AGTACATGCCCGTACTTTGGACCAGGTTTCTCATCGGCGGTCCTTGGAGG
GCGGGGCGGCGAGCAGTGGCCAAGGCTTTGACCTCCACGCTGGAACGGGG
TGGGTGGGCATACGTGGATCTATACCAGGGCCGCCCCTTAGTCGGGGCTA
AGTACATGCCCGTACTTTGGACCAGGTTTCTCATCGGCGGTCCTTGGAGG
GCGGGGCGGCGAGCAGTGGCCAAGGCTTTGACCTCCACGCTGGAACGGGG
TGGGTGGGCATACGTGGATCTATACCAGGTTCACTTTCCGTTCCCGTACC
TTGGAGGGATGGACGCTTTGGCCGAAGGGCTGTCGAAAGCCTGCGATCGA
GGGCTGTGCCGCTCGGTGGGAGTCTCCAATTTCAACGCGAAGCAGGTTCA
CTTTCCGTTCCCGTACCTTGGAGGGATGGACGCTTTGGCCGAAGGGCTGT
CGAAAGCCTGCGATCGAGGGCTGTGCCGCTCGGTGGGAGTCTCCAATTTC
AACGCGAAGCAGATGCGCGAGTTCTCGGAGAAACTGGAGAAGTATGGGAT
CACTCTGGCCTCCAACCAATTCGAGTATTCTCTCGTCAATCGAGATGCTG
AGGCAGACGGAACCTTGGCGGAGTGCAAACGGCTGGATGCGCGAGTTCTC
GGAGAAACTGGAGAAGTATGGGATCACTCTGGCCTCCAACCAATTCGAGT
ATTCTCTCGTCAATCGAGATGCTGAGGCAGACGGAACCTTGGCGGAGTGC
AAACGGCTGGGTGTGGTGCCGCTCGCGCACACGCCGCTGGCAAAGGGACT
GGCGACCGGAGTCTACACGGCATCCAATCCGACCGGCGGGAAAATGGGGG
CACCGAAATATGTTTTCAAGGACCTCTTCCCCTTGACTCCTATCTACACA
GCTCTGGTCGCGGTGTGGTGCCGCTCGCGCACACGCCGCTGGCAAAGGGA
CTGGCGACCGGAGTCTACACGGCATCCAATCCGACCGGCGGGAAAATGGG
GGCACCGAAATATGTTTTCAAGGACCTCTTCCCCTTGACTCCTATCTACA
CAGCTCTGGTCGCGGTGGCAAAGCGAGTAGAAGGACGGTTGTCGATCGAG
GCCAAGGAGGAGCAGAAGAGGGCCTTTGAGGCTTTAGGGGACGACGAAGA
ACAAGCACCGCCCCCAAAGCTCAAGAAGATCAGCACCACACAGGTGGCGC
TGAACTACGTCAGGTGGCAAAGCGAGTAGAAGGACGGTTGTCGATCGAGG
CCAAGGAGGAGCAGAAGAGGGCCTTTGAGGCTTTAGGGGACGACGAAGAA
CAAGCACCGCCCCCAAAGCTCAAGAAGATCAGCACCACACAGGTGGCGCT
GAACTACGTCAGGGCGAAAGGGGTTGTTCCGCTTCCGGGGGTCAAGACAA
GAGCGCATGCGGATGAAATAGTGGGCTGTTTGGGCTGGGAGCTCGTGCAA
GAAGACGTGGACATCCTTGATGCTGCGCATGACGGCGAAAGGGGTTGTTC
CGCTTCCGGGGGTCAAGACAAGAGCGCATGCGGATGAAATAGTGGGCTGT
TTGGGCTGGGAGCTCGTGCAAGAAGACGTGGACATCCTTGATGCTGCGCA
TGACGCGTACAAGGCCAACACCGGGGGTAAGACAATAAAGCGTGGCAAAG
AGCGGGACCCGATGAAGCGGCAGGCCCTAACGCTCAAGAAGACCCGGGGG
TGGGCATCGCAGGACTGGTACAAGGAAGACGAGTAAGCGTACAAGGCCAA
CACCGGGGGTAAGACAATAAAGCGTGGCAAAGAGCGGGACCCGATGAAGC
GGCAGGCCCTAACGCTCAAGAAGACCCGGGGGTGGGCATCGCAGGACTGG
TACAAGGAAGACGAGTAA
back to top