mRNA_L-elsbetiae_contig53.13451.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig53.13451.1
Unique NamemRNA_L-elsbetiae_contig53.13451.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: D7FXV1_ECTSI (Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV1_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 2.540e-113
Identity = 202/305 (66.23%), Postives = 228/305 (74.75%), Query Frame = 2 
Query:   35 MTAPARM-TALIFCLAMCGY----VFPGSHHVVAFTTAAGFRTRTCCGHRSKYAGVRVEAHGTCRRRDRPSLAYRRKTSTSSGRVRLSAVEGEDE----EDDGTAGVYVATETLLDDPSHMERIMASMARLEPEVAPLEGVVFRTAVNHHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAGMRLELIEVPASMEPEDKAADLAADMRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            M  PAR+ +A   CLA+CG       PGS  V      +G     C     +    R +A      R  P L  RR+      R  LSA E ++E    ED    GVYVATETLLDDPSHMERI+A+MA L P VAPLEGV F+TAV+HHCALRTSNIVRA+KFYSLLGM E ARF+A +ARCAFLEGAGMRLELIEVPA +EP+DKA DLAADMR+TGLNH+AFDVGPAIE  EG+DG+KGFLSELNRQSE+AFGMSVRLVVSPYEQRIGQDIFDLA +MDADGVLLELV+KKDTLD+DMPQAW
Sbjct:    2 MATPARLLSAFSLCLAVCGKPVAAFLPGSCRVSGEVPTSG--NSNC-----RVGTRRQQAFAP---RQWPPLRRRREP-----RWCLSAAEDDEEDEELEDVTGKGVYVATETLLDDPSHMERILAAMAELAPPVAPLEGV-FKTAVSHHCALRTSNIVRAMKFYSLLGMNEAARFRAGNARCAFLEGAGMRLELIEVPAVLEPDDKALDLAADMRTTGLNHMAFDVGPAIEA-EGLDGMKGFLSELNRQSEDAFGMSVRLVVSPYEQRIGQDIFDLAFVMDADGVLLELVHKKDTLDIDMPQAW 289
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 5.690e-61
Identity = 137/280 (48.93%), Postives = 152/280 (54.29%), Query Frame = 2 
Query:  425 GVVFRTAVNHHCALRTSNIVRALKFYSLLGMKEV-------------------------------------------------------------------------ARFKAESARCAFLEGAGMRLELIEVPA------------------SMEP-----------------------EDKAADLAADMRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            G VF+ AV+HHCALRTSNIVRA+KFYSLLGM EV                                                                         ARF+A +ARCAF EGAGMRLELIE                     S  P                       +DKA DLAADMR+TGLNH+AFDVGPAIE  EG+DG+KGFLSELNRQSE+AFGMSVRLVVSPYEQRIGQ+IFDLA +MDADGVLLELV+KKDTLD+DMPQAW
Sbjct:  205 GRVFKLAVSHHCALRTSNIVRAMKFYSLLGMNEVISLPRRGSTPTFSSVIDVQLDVAKPGVWCSSPRPWWDLCLTRTTPHPRWLPSSSFLLLSIPNARWSLSNAGQAARFRAGNARCAFFEGAGMRLELIESEPHPTTRIGHLRHSSGGEYPSQRPLQALSNLSQKCNLTISLVNLLRLDDKAVDLAADMRTTGLNHMAFDVGPAIEA-EGLDGMKGFLSELNRQSEDAFGMSVRLVVSPYEQRIGQEIFDLAFVMDADGVLLELVHKKDTLDIDMPQAW 483
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A7S3YC63_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC63_HETAK)

HSP 1 Score: 139 bits (351), Expect = 2.120e-34
Identity = 84/185 (45.41%), Postives = 105/185 (56.76%), Query Frame = 2 
Query:  452 HHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAGMRLELIEVPASMEPEDKAADLAADMRST--GLNHIAFDV------------------------GPAIEGDEGVDGLK--GFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            HH A++T NI  ALKFYSLLGM+E  RFK  +AR A++EG G+RLELIEVP  M PE +AADL+AD      GLNH A DV                        G A+    G  G +   FL  LN +SE AF  SVRL + PY Q I  ++FD+A I D DG L+EL++   TL+ +M   W
Sbjct:   58 HHYAIKTKNIFNALKFYSLLGMEEKVRFKTGAARAAWIEGVGVRLELIEVPEFMAPEGRAADLSADANVAVLGLNHAALDVTAAARACLLREQREGEKEEDRNENGAAVSRKRGEAGAEIWAFLRALNAKSEAAFQKSVRLAIRPYRQMIMNEVFDIAFISDPDGTLIELLFHVATLEHEMLPDW 242
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A7S2W1M9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W1M9_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.350e-30
Identity = 78/178 (43.82%), Postives = 110/178 (61.80%), Query Frame = 2 
Query:  419 LEGVVFRTAVNHHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAG--------MRLELIEVPASMEPEDKAADLAAD--MRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            LEG+  R+ V HH  ++  N+ R++ FYSLLG +E+ARF+A  AR A+L+ AG         RLELIEVPA ++P  +  DLAA   +  TGLNH+A D   A +      GL+  L +LN +SE  F  SV+LV+ PY+Q IGQ++++LA + D DG L+EL+  K  +   M  AW
Sbjct:   35 LEGI--RSPV-HHTGIKVQNLTRSMAFYSLLGYEEIARFRAGPARAAWLQPAGGESQAPSSQRLELIEVPAGLDPPQRQIDLAAPEYLGQTGLNHVAVD---ASDWALLAGGLREVLVQLNLKSEAQFQRSVKLVLPPYQQIIGQEVYELAFVSDPDGTLIELLAWKGEVPRPMEPAW 206
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A7S3PZA0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZA0_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.070e-21
Identity = 68/189 (35.98%), Postives = 98/189 (51.85%), Query Frame = 2 
Query:  449 NHHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAGM------------------------RLELIEVPASMEPED-----KAADLAADMRSTGLNHIAFDVGPAIE--GDEGVDGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            +HH A+RT NI  A+KFYSL G K   +F+A SAR A+L  A +                        RLE+IE+P  +  E      +A DL  +    GLNH A DV P I     +   GL  FL ++N++S + FG ++R+ + P +Q IG  +F+LA + DADGV++EL+     LD  +   W
Sbjct:   55 HHHVAIRTRNIENAIKFYSLFGFKVETKFRAASARAAWLSNAMLANGNKNDEQSNDEVLKGQSYNIASRLEIIEIPQHVLNEKEGTIKRAIDLLQNEAILGLNHYALDVTPYIHHLAKDEYYGLDQFLLQINQESLKMFGKTLRVAMQPKQQVIGSQVFELAFVYDADGVVVELMRYIKELDQKVESGW 243
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A7S2UFM2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFM2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.280e-19
Identity = 76/224 (33.93%), Postives = 107/224 (47.77%), Query Frame = 2 
Query:  362 SHMERIMASMARLEPEVAPLEGVVFRTAVNHHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAGM---------------RLELIEVPASMEPE-----DKAADLAADMRSTGLNHIAFDVGPAI-----EGDEGVD------------GLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            S+ +  +  M R    +  L G +    V HH A++T +I  A+KFYSLLG +  A+F+A  AR AFL    +               R+EL+EVPA M  E      +A DLA      GLNH+A DV   I     E D  V             GL+ ++ +LN  S   FG ++R+ VSP +Q IG  +++ A + DADG L+ELV      D  +   W
Sbjct:   46 SYRDNGLREMDRTSALMNSLTGAI----VAHHSAVKTRDIEVAIKFYSLLGFRVEAKFRAGPARAAFLTNVPLADKENEGRVGAPTQSRIELLEVPAYMLQEAEGTRKRAIDLAKHETLLGLNHLALDVTECIRQRRIEEDMVVPPEEVSGAQCSLYGLQSWIDDLNSMSIATFGKNLRIAVSPDKQIIGSTVYEYAFLYDADGSLIELVSAHRERDTVVDSGW 265
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A7S2XWR0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWR0_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.800e-18
Identity = 70/191 (36.65%), Postives = 96/191 (50.26%), Query Frame = 2 
Query:  452 HHCALRTSNIVRALKFYSLLGMKEVARFKA------ESARCAFLEGAGMRLELIEVP----ASME-------PEDKAADLAAD--MRSTGLNHIAFDVGPAIEG-------DEGV--------DGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            HHC++ T NI  +LKFYSLLG ++V RF          A    L G G  +EL+E      A +E          KA +L +D  M   GLNH+A DV  + +        +EG         + +K FLS LN +SE+ F  SVRLV+ P +Q IG  +F+ A I D DG L+EL+    TL  ++   W
Sbjct:   70 HHCSVATGNIQNSLKFYSLLGFRDVNRFYTIKDGLPTKACWMELNGGGAFVELVEEATDPLADIEGYEDESPKRQKALNLVSDEHMMVLGLNHLAIDVTKSWKAIAEESKKEEGSNQAEEVREERMKTFLSALNEKSEKQFQKSVRLVIPPAQQMIGSQVFETAFIADPDGTLIELLLHMKTLPQELEPDW 260
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A7S0F5M1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F5M1_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 3.740e-17
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 2 
Query:  572 AGMRLELIEVPASMEPED-KAADLAADMRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW 922
            A  RLELIEVP  + P++ +A +L       G NH A DV  +I  D  +  L+ +++ +NR+S E FG ++R+ + P +Q IG  +F+LA + DADG L+EL+ K+  L+  +   W
Sbjct:    4 AACRLELIEVPPFLLPDNARAVNLMQRQELLGQNHFAMDVTQSIAQDASLSNLQDYIASINRKSIETFGKALRIALQPQQQMIGNGVFELAFLFDADGSLIELLNKQSELEQTIASGW 121
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A6I5RIC9_9CYAN (VOC family protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A6I5RIC9_9CYAN)

HSP 1 Score: 88.2 bits (217), Expect = 5.370e-17
Identity = 53/148 (35.81%), Postives = 83/148 (56.08%), Query Frame = 2 
Query:  452 HHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAGMRLELIEVPASMEPEDKAADLAADMRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQ-----SEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELV 880
            HH ++RT++I RA+ FY LLG     RF   S    ++EG G R+EL++VP   +P   AAD  AD   TG  H++FD+   IE       L G+L  L  +     +E    + +++++ P +Q IG  ++++A I DADG+ LE +
Sbjct:    2 HHASIRTADIFRAIAFYELLGFSVCERFTTGSTLACWMEGLGGRIELLQVP---QPRP-AADAFADEHYTGYYHLSFDLSQVIEN------LPGWLQALQAKFTDASTENPSVLPLKVLLEPQQQMIGDRVYEVAFIADADGLPLEFL 139
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BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Match: A0A1U7JBB6_9CYAN (Glyoxalase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A1U7JBB6_9CYAN)

HSP 1 Score: 84.3 bits (207), Expect = 1.110e-15
Identity = 50/143 (34.97%), Postives = 79/143 (55.24%), Query Frame = 2 
Query:  452 HHCALRTSNIVRALKFYSLLGMKEVARFKAESARCAFLEGAGMRLELIEVPASMEPEDKAADLAADMRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQSEEAFGMSVRLVVSPYEQRIGQDIFDLALIMDADGVLLELV 880
            HH ++RT +I RA+ FY  LG     RF A      ++EG G R+ELI+VP   EP   AAD   D   +G  H++FD+       E    L  +L EL ++ E++     ++++ P +Q IG  ++++A + DADG+ LE +
Sbjct:    3 HHASIRTQDIHRAIAFYEALGFTVHERFTAGITLACWMEGLGGRIELIQVP---EPRP-AADAFGDEHYSGYYHLSFDL------TEATSSLPLWLEELRQRFEQSAAAMPKVLLEPQQQIIGDRVYEVAFLADADGLPLEFI 135
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig53.13451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXV1_ECTSI2.540e-11366.23Glyoxalase/bleomycin resistance protein/dioxygenas... [more]
A0A6H5K4U7_9PHAE5.690e-6148.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3YC63_HETAK2.120e-3445.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2W1M9_9STRA1.350e-3043.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PZA0_9STRA6.070e-2135.98Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2UFM2_9STRA1.280e-1933.93Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2XWR0_9STRA2.800e-1836.65Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S0F5M1_9STRA3.740e-1738.14Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A6I5RIC9_9CYAN5.370e-1735.81VOC family protein n=2 Tax=Cyanobacteria TaxID=111... [more]
A0A1U7JBB6_9CYAN1.110e-1534.97Glyoxalase n=4 Tax=Cyanobacteria TaxID=1117 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig53contigL-elsbetiae_contig53:23597..28034 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.4
Seed ortholog evalue6.4e-93
Seed eggNOG ortholog2880.D7FXV1
Hectar predicted targeting categorychloroplast
EggNOG OGs2D0KU@1,2SEKQ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionGlyoxalase/bleomycin resistance protein/dioxygenase
Ec32 orthologEc-23_001400.1
Exons6
Model size1612
Cds size891
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig53.13451.1prot_L-elsbetiae_contig53.13451.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig53 23631..27347 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816548.0045145-UTR-L-elsbetiae_contig53:23596..236301622816548.0045145-UTR-L-elsbetiae_contig53:23596..23630Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig53 23597..23630 +
1691683638.9193044-UTR-L-elsbetiae_contig53:23596..236301691683638.9193044-UTR-L-elsbetiae_contig53:23596..23630Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig53 23597..23630 +
1622816548.103065-UTR-L-elsbetiae_contig53:27347..280341622816548.103065-UTR-L-elsbetiae_contig53:27347..28034Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig53 27348..28034 +
1691683638.98828-UTR-L-elsbetiae_contig53:27347..280341691683638.98828-UTR-L-elsbetiae_contig53:27347..28034Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig53 27348..28034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816548.0175915-CDS-L-elsbetiae_contig53:23630..239391622816548.0175915-CDS-L-elsbetiae_contig53:23630..23939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 23631..23939 +
1691683638.932649-CDS-L-elsbetiae_contig53:23630..239391691683638.932649-CDS-L-elsbetiae_contig53:23630..23939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 23631..23939 +
1622816548.0331042-CDS-L-elsbetiae_contig53:24677..248571622816548.0331042-CDS-L-elsbetiae_contig53:24677..24857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 24678..24857 +
1691683638.9415872-CDS-L-elsbetiae_contig53:24677..248571691683638.9415872-CDS-L-elsbetiae_contig53:24677..24857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 24678..24857 +
1622816548.0462856-CDS-L-elsbetiae_contig53:25438..255131622816548.0462856-CDS-L-elsbetiae_contig53:25438..25513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 25439..25513 +
1691683638.950605-CDS-L-elsbetiae_contig53:25438..255131691683638.950605-CDS-L-elsbetiae_contig53:25438..25513Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 25439..25513 +
1622816548.0596132-CDS-L-elsbetiae_contig53:26090..262491622816548.0596132-CDS-L-elsbetiae_contig53:26090..26249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 26091..26249 +
1691683638.9596257-CDS-L-elsbetiae_contig53:26090..262491691683638.9596257-CDS-L-elsbetiae_contig53:26090..26249Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 26091..26249 +
1622816548.0730658-CDS-L-elsbetiae_contig53:26716..267701622816548.0730658-CDS-L-elsbetiae_contig53:26716..26770Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 26717..26770 +
1691683638.968942-CDS-L-elsbetiae_contig53:26716..267701691683638.968942-CDS-L-elsbetiae_contig53:26716..26770Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 26717..26770 +
1622816548.0872025-CDS-L-elsbetiae_contig53:27233..273471622816548.0872025-CDS-L-elsbetiae_contig53:27233..27347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 27234..27347 +
1691683638.9783459-CDS-L-elsbetiae_contig53:27233..273471691683638.9783459-CDS-L-elsbetiae_contig53:27233..27347Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig53 27234..27347 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig53.13451.1

>prot_L-elsbetiae_contig53.13451.1 ID=prot_L-elsbetiae_contig53.13451.1|Name=mRNA_L-elsbetiae_contig53.13451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp
MTAPARMTALIFCLAMCGYVFPGSHHVVAFTTAAGFRTRTCCGHRSKYAG
VRVEAHGTCRRRDRPSLAYRRKTSTSSGRVRLSAVEGEDEEDDGTAGVYV
ATETLLDDPSHMERIMASMARLEPEVAPLEGVVFRTAVNHHCALRTSNIV
RALKFYSLLGMKEVARFKAESARCAFLEGAGMRLELIEVPASMEPEDKAA
DLAADMRSTGLNHIAFDVGPAIEGDEGVDGLKGFLSELNRQSEEAFGMSV
RLVVSPYEQRIGQDIFDLALIMDADGVLLELVYKKDTLDVDMPQAW*
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mRNA from alignment at L-elsbetiae_contig53:23597..28034+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig53.13451.1 ID=mRNA_L-elsbetiae_contig53.13451.1|Name=mRNA_L-elsbetiae_contig53.13451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4438bp|location=Sequence derived from alignment at L-elsbetiae_contig53:23597..28034+ (Laminarionema elsbetiae ELsaHSoW15)
TGTACTGCTGCTTCCAACGGCAGGTACCGGAGTAATGACGGCTCCAGCTC
GAATGACCGCCTTGATTTTTTGCCTTGCGATGTGTGGATATGTTTTTCCT
GGAAGTCATCATGTTGTTGCCTTCACAACAGCAGCCGGCTTCAGAACACG
CACCTGCTGCGGCCATCGCAGCAAATACGCAGGTGTTCGTGTTGAAGCAC
ACGGTACCTGCCGGCGGAGGGATCGCCCCTCTTTGGCATACCGACGGAAG
ACTTCCACGTCTTCTGGGAGGGTACGATTATCTGCGGTAGAGGGCGAGGA
TGAGGAGGATGATGGCACAGCAGGAGTTTACGTCGCGACCGAGGTGAGAG
AGAGAGCAGAGCAGCAGGTGCATGAACACTAACACGCACTTGCGATAGCA
ACCCTCAATTGAAGCTCCTAGCGCCCAAAGCAGCGAGGCCGATGAGTCTG
CAGTAGTTGACCGGCGTTTCTTGGAGATTTTGGAAGGCATTCGCACATAA
TATACCGGCGGGATGACCGCAACAGGCAGTTTGAAGATATTCAACGAAAG
GGGCCACCTACTTCCTACTTGGTGACTTCGTCGTGATGCTTTCGTTCAAA
TCAAAGGGTATCTATCTACATAAATACACTCGCCGAGGAATCTTAACATT
TTGCTGGTGTATTGTACATTCAGCCAGCCTATCGCAGCCGAAGGTGGAGT
GTCCAGTACATACTCTGTAATTCGGATGGCGATGTCGGCGCGACGGTCAA
CAAACACGATCGCCGCTTCATGCTCCAGTGAGGAAGCGCATGTTCGCTTT
ATCCTCCTGTGAAGCATTGTAGAACAACCGCGATAACGTAGTAGCAGCAG
CTAGTAGTAGCAGCAGCGGCCTACGACTACGACGAAGACAGCGACAGCGA
CAACGCTTGCCAAGCCCCAAAAGACATAAACCTCTGGTACAAGTCATTCC
ACATCAGAGTCCCGTCTCGGAACGTGAGGTAGGCTCCGTCTTTTATTGTC
CGTGAGTTCCCTTTCAAATATCGAAATAGGAGTTGACCCCCGCCCTATTG
CTCCCGGTATTATGTACACGAACGACAACAGACATTGCTGGACGACCCCA
GCCACATGGAGCGAATAATGGCGTCGATGGCGCGGCTGGAGCCGGAAGTT
GCACCGCTGGAGGGCGTCGTTTTCAGAACGGCAGTCAACCACCACTGCGC
CCTCCGCACGTCGAACATCGTTAGGGCGTTGAAGTTCTACTCCCTGCTCG
GCATGAAGGAGGTACATAAACATGTAAATATACAAACATGCATAAACACG
TAAACCTGGTCGTAACTTTACAGGTGTACGGATTTAACCACTGTTCACGT
AGTTTCGTCTCTCTCAAGTTTGCAGCGTGTCCAGCCACTCCGTGTCTCAC
CACCTATGAACTCTGTCTGTAGCACCACTCGTGAGTCGCAAGTCATTGGC
GCTGTGTATCGTTTCACAAGTAGAGGAGCGCACTGTGTGCGTCGCCCAAC
CGGCATGATGAAGAAGCGGGATGCGTCATCTCGCACCTATTTATCATCTC
GGGGTTTGACAAGAAGTAAAACTTTGAAGTTTGCGTTGTTCTCCACGAGC
AGCAGTGAGCTATATGCAAAAGCCACTTCGCCCCAACACCGACTCAAAGA
CGAGCCACGACCGCCTCAAAGACGTCGAGCAGCTTTTGCTTCAGCACAAA
ACATCAGAGCAGTCGATGTACGCCCACCTGTGGAGTAATAGGCATTTCCC
GGGGGGTCGCTGTTGTAACAGCATCAACCCTCCCCCGCCGCTCCAGCTAC
AGAATCATCATTTGTTTTGTTTTTGAACTTACTCCCGAGCAGGTGGCTCG
GTTCAAAGCGGAGAGCGCACGGTGTGCCTTTTTAGAGGGCGCAGGCATGC
GCCTAGAGTTAATCGAGGTATCTATGAATACGCTTTCCCGCTGTTTTTCA
TCTTGTGTGATGTGCTAAAGGGTGTCGTGTGGGTGTGAGGTGTAGAAATG
CGCCTGGTTCAGCGGCTTAGTCTTCATTTTCGTGGGTGTCTACACACCAC
TTGTCTACACCAGTTACCGTAGTTTCTCGATTTTTTCTTAGCGTTGGTGT
TGCAGGCAAACGGGGCCGTTCTGCAGCGCCGGCACGTTGGTCCTTGTGTG
TTGCGCAGCTTGATGCCCTTGACGCTCTCACGACGGTAGATTATTTACTT
CGACTGCAAGACATGTGCGCACGCGCCCACGGTAGTATCTGTCGCAGTTC
ATCCCTCTTGAACCAGGCGAAACCAGGTGCCAGGGCCTCAAATTCATCAA
CACCCTCGTGCACTCAAATCGGGCCCCACTCGGTCACTCGGTCACCGCCC
TGGCATACAAGGGGCGCGCACCGTGATCACCCCAAACTGCCCGTCTGTGC
AGAGGAGGCGCAGCGTTTTTTCAATTCTGAAGAACAAGCCTTGAGCACAA
AGACCTTCATGTGGCTATGTTTGTTATGTATGTATCGGTCTCAGGTGCCC
GCGTCGATGGAGCCGGAGGACAAAGCTGCGGACCTGGCGGCCGACATGCG
GTCGACGGGGCTGAACCACATCGCTTTTGACGTGGGTCCGGCTATAGAGG
GGGACGAGGGCGTGGACGGGCTGAAGGGCTTCTTGTCGGAGTTGAACCGA
CAGGTGCATGGGTCCACGAAGTCGACTACAACACCATATTTCAAAACACG
TCCGTGTCGCCCGGCGCAGCGTCACTGCATGTACACGCACGCGTGCCCAC
CCCAAGTGCATGCACGCGCTTCGTCTAACCCGCTCCAGTAAACCCGCTCG
ATAAAATCTAGATGTTCCTGATATACCCCCGTGTGTTCACCGTTTATCAC
AAATTACTTAGCGTCTCCCTTAGATACGGCGCAAGGACACATGGCTCCCG
AGTCAACTTCGGCAGGTTCGGGTTTGACAGCGGTTGACTGCGAGGAATCC
TACACTCTTCGATGCACGATCATGTTTGCCCTTTGCCCTGTGGGGTTGTG
ATGTCTGAAGGGTTCCCACCCCGCTCCCCGCTCCCCGCTCCCCGCTCCTC
GTTGACTCCTGTTTTGCCGCCGCCCGCTCCGCTGTCGACTCCTTCCGCTG
TCGACATCGTTCCCTTGCAGAGCGAAGAAGCGTTCGGGATGAGCGTGCGA
TTGGTCGTCAGCCCGTACGAACAGGTCAGCTTCCGCCACAGCCAACTATT
CGCGGTTGGGACCTCTCTCTGTCGGGAGATGCTCCTGAATAGGCGTCGAT
GCCGTATTTTGGCCATCCATGTGTAGGCGAAAGGGTTGTCCCAATGGTAA
ATCGTTAAGCATGGGGTTGTGATGTTGTGGCCTGTGAGAGAGCGGAAAAA
ATGTCGCCTCTCCGCGCGGATGACGTGTCCCTAGTTTGCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNN
NNNGGGGAAAAAATGGGCCCCTCCCGCGCGGGGGACGTGCCCCCGGTTTG
CCCCCCCCCCCCCCCCGCTTTGTAACCCCCCACTCCACGTCTTCAACACT
CCACTGCTCCCCCCCGCCCCGCACACGTGCGCCGCAGCGTATTGGCCAGG
ATATTTTTGACCTCGCCTTGATCATGGACGCGGATGGGGTGTTGTTGGAG
CTTGTGTACAAGAAGGACACTCTCGACGTCGATATGCCGCAGGCTTGGTG
AACCGGACTTCTGCCGCGGCCTTCCGGAAAAGCGTCTCCGGCCGGGGGGA
ATGGGCTGGGGACCTGTGCGCGTGCTCTTTTTTGCGCCCCGCTTCTAATG
TTTTCGGCGCACCCCCCTCTGGTCTAGACGTGCGTCGTACAAAAGTTGCT
TTGTCTGACGTGAAACCGATGGCGTTTGTCTCGCACACCGGGTTTTGGAA
CTTTTGTTTTCGAGTACCCCCTTCAGACTACTACTGCTGACTCTTTTTGG
CGTGCGGCTGGCTCATCATGGCGATGTTCTGGGGCAAGTGTCCTGAGCGA
ATGTCTGCCACTTGAATCATGTTTTTTTTCTGCCCGCCGGAAGAAAAATC
AGGTGGAAATTCGGCTCTAGGATGTGGTGGGATAGATGGTCAGTCTTGAA
GGGGGGCTGAAATGGGTCTCTTCGGTTCATAAATACGGATGTACTTCACA
TCGGATTTAGGGAAGTATAACGCGTCTTGATTCTGTGTCGTTCCTTCAAC
GCCTGTGCTTCGGAGAGAACAGCGCCTAAATCTACCCAGATGGATATGCC
CTCCGTTTTTGTGCTGTACTTTCGTTCTATCTATTGTACAGCAGCTTGCT
TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGTGCAGATGAAGGCCGAT
GGCTGTAGAGGAGAGGAACGAGTTGCTAAAAAAGAACC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig53:23597..28034+

>mRNA_L-elsbetiae_contig53.13451.1 ID=mRNA_L-elsbetiae_contig53.13451.1|Name=mRNA_L-elsbetiae_contig53.13451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig53:23597..28034+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGCTCCAGCTCGAATGACCGCCTTGATTTTTTGCCTTGCGATGTG
TGGATATGTTTTTCCTGGAAGTCATCATGTTGTTGCCTTCACAACAGCAG
CCGGCTTCAGAACACGCACCTGCTGCGGCCATCGCAGCAAATACGCAGGT
GTTCGTGTTGAAGCACACGGTACCTGCCGGCGGAGGGATCGCCCCTCTTT
GGCATACCGACGGAAGACTTCCACGTCTTCTGGGAGGGTACGATTATCTG
CGGTAGAGGGCGAGGATGAGGAGGATGATGGCACAGCAGGAGTTTACGTC
GCGACCGAGATGACGGCTCCAGCTCGAATGACCGCCTTGATTTTTTGCCT
TGCGATGTGTGGATATGTTTTTCCTGGAAGTCATCATGTTGTTGCCTTCA
CAACAGCAGCCGGCTTCAGAACACGCACCTGCTGCGGCCATCGCAGCAAA
TACGCAGGTGTTCGTGTTGAAGCACACGGTACCTGCCGGCGGAGGGATCG
CCCCTCTTTGGCATACCGACGGAAGACTTCCACGTCTTCTGGGAGGGTAC
GATTATCTGCGGTAGAGGGCGAGGATGAGGAGGATGATGGCACAGCAGGA
GTTTACGTCGCGACCGAGACATTGCTGGACGACCCCAGCCACATGGAGCG
AATAATGGCGTCGATGGCGCGGCTGGAGCCGGAAGTTGCACCGCTGGAGG
GCGTCGTTTTCAGAACGGCAGTCAACCACCACTGCGCCCTCCGCACGTCG
AACATCGTTAGGGCGTTGAAGTTCTACTCCCTGCTCGGCATGAAGGAGAC
ATTGCTGGACGACCCCAGCCACATGGAGCGAATAATGGCGTCGATGGCGC
GGCTGGAGCCGGAAGTTGCACCGCTGGAGGGCGTCGTTTTCAGAACGGCA
GTCAACCACCACTGCGCCCTCCGCACGTCGAACATCGTTAGGGCGTTGAA
GTTCTACTCCCTGCTCGGCATGAAGGAGGTGGCTCGGTTCAAAGCGGAGA
GCGCACGGTGTGCCTTTTTAGAGGGCGCAGGCATGCGCCTAGAGTTAATC
GAGGTGGCTCGGTTCAAAGCGGAGAGCGCACGGTGTGCCTTTTTAGAGGG
CGCAGGCATGCGCCTAGAGTTAATCGAGGTGCCCGCGTCGATGGAGCCGG
AGGACAAAGCTGCGGACCTGGCGGCCGACATGCGGTCGACGGGGCTGAAC
CACATCGCTTTTGACGTGGGTCCGGCTATAGAGGGGGACGAGGGCGTGGA
CGGGCTGAAGGGCTTCTTGTCGGAGTTGAACCGACAGGTGCCCGCGTCGA
TGGAGCCGGAGGACAAAGCTGCGGACCTGGCGGCCGACATGCGGTCGACG
GGGCTGAACCACATCGCTTTTGACGTGGGTCCGGCTATAGAGGGGGACGA
GGGCGTGGACGGGCTGAAGGGCTTCTTGTCGGAGTTGAACCGACAGAGCG
AAGAAGCGTTCGGGATGAGCGTGCGATTGGTCGTCAGCCCGTACGAACAG
AGCGAAGAAGCGTTCGGGATGAGCGTGCGATTGGTCGTCAGCCCGTACGA
ACAGCGTATTGGCCAGGATATTTTTGACCTCGCCTTGATCATGGACGCGG
ATGGGGTGTTGTTGGAGCTTGTGTACAAGAAGGACACTCTCGACGTCGAT
ATGCCGCAGGCTTGGTGACGTATTGGCCAGGATATTTTTGACCTCGCCTT
GATCATGGACGCGGATGGGGTGTTGTTGGAGCTTGTGTACAAGAAGGACA
CTCTCGACGTCGATATGCCGCAGGCTTGGTGA
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