mRNA_L-elsbetiae_contig5292.13435.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5KE84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE84_9PHAE) HSP 1 Score: 156 bits (395), Expect = 2.260e-46 Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADET 247 VF G+RLRLPFPRL GPGHRWFNSH LGGDPDL DFQAWARTMLRR LVHPRDADAWRAA VDV+GGGHGQLVVSAADET Sbjct: 59 VFRTGYRLRLPFPRLPAGPGHRWFNSHQLGGDPDLIDFQAWARTMLRRGLVHPRDADAWRAALVDVQGGGHGQLVVSAADET 140
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE) HSP 1 Score: 171 bits (432), Expect = 2.500e-46 Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRL 256 VFG GFRL LPFPRL PGPGHRWFNSHPLGGDPDL DFQAWARTMLRRRLVHPRDADAWRAAFVDVEG GHGQLVVSAADET R+ Sbjct: 58 VFGAGFRLHLPFPRLPPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGSGHGQLVVSAADETWRV 142
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.190e-45 Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRL 256 VFG GFRLRLPFPRL PGPGHRWFNSHPLGGDPDL DFQAWARTMLRRRLVH DADAWRAAFVDVEGGGHGQLVVSAADET R+ Sbjct: 60 VFGAGFRLRLPFPRLCPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRV 144
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5L8I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I4_9PHAE) HSP 1 Score: 144 bits (363), Expect = 4.820e-37 Identity = 73/103 (70.87%), Postives = 77/103 (74.76%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRLDVVVSDVLLFVHAPVHGQ 310 VFG G+RLRLP R+ P PGHRWFNSHP GGDPDLRDFQA A TML R LVHPRDADAWR A VDVEGGG GQLVVSA DET R + S V L V A V + Sbjct: 37 VFGAGYRLRLPLHRVYPVPGHRWFNSHPFGGDPDLRDFQALAGTMLCRGLVHPRDADAWRVAIVDVEGGGLGQLVVSAVDETWRHGIPTSLVGLQVRAGVASE 139
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5K6B4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B4_9PHAE) HSP 1 Score: 139 bits (350), Expect = 4.430e-36 Identity = 65/102 (63.73%), Postives = 79/102 (77.45%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRLDVVVSDVLLFVHAPVHG 307 VFG GFR+R+ F SPGPGHRWFNSHPLGGDP+L +FQ WART+L+R +VHPR+A+AWR AFVDVEGGG GQLVVSAAD+T R+ + + + HG Sbjct: 54 VFGTGFRIRISF-ASSPGPGHRWFNSHPLGGDPNLYNFQTWARTVLQRGMVHPREAEAWRTAFVDVEGGGLGQLVVSAADDTWRVILCWASAGRRIDVDTHG 154
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5JU52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU52_9PHAE) HSP 1 Score: 128 bits (322), Expect = 3.360e-34 Identity = 58/80 (72.50%), Postives = 70/80 (87.50%), Query Frame = 2 Query: 17 FRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRL 256 FR+R+ FP SPGPG+RWF+SHPLGGDP+L +FQ W RT+L+R +VHPRDA+AWR AFVDVEGGG GQLVVSAADE+ R+ Sbjct: 79 FRVRISFPS-SPGPGYRWFHSHPLGGDPNLYNFQTWTRTVLQRGMVHPRDAEAWRTAFVDVEGGGLGQLVVSAADESWRV 157
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 135 bits (341), Expect = 4.440e-34 Identity = 62/85 (72.94%), Postives = 74/85 (87.06%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRL 256 VFG GFR+R+ FP SPGPG+RWFNSHPLGGDP+L +FQ WART+L+ +VHPRDA+AWR AFV+VEGGG GQLVVSAADE+ R+ Sbjct: 53 VFGTGFRVRISFPS-SPGPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRV 136
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 133 bits (335), Expect = 2.920e-33 Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRL 256 VFG G+R+R+ FP S GPGH WFNSHP+GGDP+L FQ WAR +L R +VHPRDA+AWR AFVDVEGGG GQLVVS+ADET R+ Sbjct: 53 VFGTGYRIRISFPS-SAGPGHTWFNSHPVGGDPNLYSFQTWARMVLERGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRV 136
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 128 bits (321), Expect = 2.070e-31 Identity = 58/81 (71.60%), Postives = 71/81 (87.65%), Query Frame = 2 Query: 14 GFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHGQLVVSAADETVRL 256 G+R+R+ FP SPGPG+RWFNSHPLGGDP+L +FQ WART+L+ +VHPRDA+AWR AFV+VEGGG GQLVVSAADE+ R+ Sbjct: 37 GWRVRISFPS-SPGPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRV 116
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Match: A0A6H5L8Q0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8Q0_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.040e-30 Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 2 Query: 2 VFGPGFRLRLPFPRLSPGPGHRWFNSHPLGGDPDLRDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGGGHG 217 VFG GFR+R+ FP SPG HRWFN HPLGGDP+L +FQ WART+L+R ++HPRDA+AWR A VDVEGGG G Sbjct: 13 VFGTGFRIRISFPS-SPGREHRWFNPHPLGGDPNLYNFQTWARTVLQRGMIHPRDAEAWRTALVDVEGGGVG 83 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5292.13435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5292.13435.1 >prot_L-elsbetiae_contig5292.13435.1 ID=prot_L-elsbetiae_contig5292.13435.1|Name=mRNA_L-elsbetiae_contig5292.13435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp GLRARVPPPPAVPPPLPGAGAPLVQLAPARRGSRPPGLPGLGEDDAAQAPback to top mRNA from alignment at L-elsbetiae_contig5292:431..892+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5292.13435.1 ID=mRNA_L-elsbetiae_contig5292.13435.1|Name=mRNA_L-elsbetiae_contig5292.13435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=462bp|location=Sequence derived from alignment at L-elsbetiae_contig5292:431..892+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5292:431..892+ >mRNA_L-elsbetiae_contig5292.13435.1 ID=mRNA_L-elsbetiae_contig5292.13435.1|Name=mRNA_L-elsbetiae_contig5292.13435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig5292:431..892+ (Laminarionema elsbetiae ELsaHSoW15)back to top |