mRNA_L-elsbetiae_contig5291.13433.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: D8LEN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEN3_ECTSI) HSP 1 Score: 258 bits (658), Expect = 3.890e-77 Identity = 119/135 (88.15%), Postives = 126/135 (93.33%), Query Frame = 1 Query: 10 GEAEEASRGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRGNLLQAVPAEYARSLPAHWPFGINPDSDS 414 G+AEE SRGT++LHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLI+DP FVEKRFFVRSKRYV SHLTEAYQAGLRGNLLQAVP ++ S+PAHWPFGI DS S Sbjct: 886 GDAEEVSRGTIELHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIMDPSFVEKRFFVRSKRYVLSHLTEAYQAGLRGNLLQAVPPKFQASMPAHWPFGIKADSSS 1020
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: D7G7X3_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X3_ECTSI) HSP 1 Score: 217 bits (552), Expect = 5.960e-67 Identity = 104/136 (76.47%), Postives = 112/136 (82.35%), Query Frame = 1 Query: 10 GEAEEASRGT-VDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRGNLLQAVPAEYARSLPAHWPFGINPDSDS 414 G+AEE ++L M+SFGAPR GN+IYAARYNDVVP SFRVVVDGDPVPGVPSWWYTHVGTKVLIDG GRGSLIIDP FVEKRFF RSKR+V SH YQ GLRGNLLQAVP E+ R LPAHWP+GI DS S Sbjct: 88 GKAEEPPPDPKLELCMYSFGAPRAGNAIYAARYNDVVPDSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGHGRGSLIIDPSFVEKRFFTRSKRHVLSHRIPNYQTGLRGNLLQAVPPEFQRRLPAHWPYGIKDDSSS 223
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: D8LEN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEN4_ECTSI) HSP 1 Score: 207 bits (526), Expect = 5.910e-59 Identity = 103/145 (71.03%), Postives = 116/145 (80.00%), Query Frame = 1 Query: 10 GEAEEAS-RGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRGNLLQAVPAEYARSLPAHWPFGINPDSDSELSDADDGA 441 GEAEE V+L M+SFGAPR GNSI+AAR ++VVP SFRVVVDGDPVPG+PSW Y H GT+ LIDGRGRGSLIIDP FVEKRFF RSKR+V SHL AYQAGLRGNLLQAVP E S+PAHWP+GI +S S+ S +D GA Sbjct: 1275 GEAEEVPLTPKVELRMYSFGAPRAGNSIFAARCDEVVPDSFRVVVDGDPVPGIPSWRYAHAGTQALIDGRGRGSLIIDPSFVEKRFFARSKRHVLSHLVHAYQAGLRGNLLQAVPPELQGSVPAHWPYGIKDNSSSDPS-SDGGA 1418
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: A0A6H5JCT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT1_9PHAE) HSP 1 Score: 170 bits (430), Expect = 4.820e-46 Identity = 83/132 (62.88%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 1 GLEGEAEEASRGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRS--KRYVFSHLTEAYQAGLRGNLLQAVPAEYARSLPAHWPF 390 G +GE + SRG V+L +FSFGAPR GN YAARYN VP SFR+VVDGDPVPG+P+W Y H GTKVLIDGRGRG L++DP E+R F RS +RYV H T Y+ GLRG LL+AV E A LP HWPF Sbjct: 860 GGDGE-DRRSRGEVELSLFSFGAPRAGNPRYAARYNAAVPRSFRIVVDGDPVPGLPTWRYGHAGTKVLIDGRGRGPLVLDPSLAEQRVFPRSERRRYVHHHDTGRYRQGLRGRLLEAVLPEVAAGLPNHWPF 990
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: A0A6H5L591_9PHAE (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L591_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.000e-39 Identity = 77/135 (57.04%), Postives = 91/135 (67.41%), Query Frame = 1 Query: 13 EAEEAS-RGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRGNLLQAVPAEYARSLPAHWPFGINPDSDS 414 EAEE V+L M+S GAPR GNSI+AA ++VVP SFRV+V GDPVPG+P+W Y H GT+ LIDGR R SL+IDP F EKRFF RSKR+V S L +AYQAGL NLLQ P+GI +S S Sbjct: 212 EAEEVPLTPKVELRMYSVGAPRAGNSIFAAHCDEVVPDSFRVMVHGDPVPGIPTWRYAHAGTQALIDGRRRASLMIDPSFAEKRFFARSKRHVLSDLVQAYQAGLSCNLLQ--------------PYGIKDNSSS 332
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: A0A7S1UK76_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK76_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.830e-26 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 16 AEEASRGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYT-----HVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRGNL 336 AE A R + L ++FG PRVGNS +A Y+ +VP+ +RV VDGD V P YT HVG ++ID GRGSLI+DP FVE+ F +S+R V SHL +Y+ GL G L Sbjct: 51 AENAER--ISLSCYTFGQPRVGNSTWATTYDQMVPNMYRVTVDGDVVTNAPRAGYTCLSWKHVGVGIVIDKEGRGSLIVDPSFVERSFRTKSRRSVSSHLLNSYRCGLEGVL 160
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: A0A7S3Y5L6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5L6_HETAK) HSP 1 Score: 113 bits (282), Expect = 3.590e-26 Identity = 58/125 (46.40%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 1 GLEGEAEEASRGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPS-WWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRGNLLQAVPAEYARSL 372 GL +A + G V+ M++FG+PRVGN + YN +VP SFRVV DGD V G+P WY H+GT+V+IDG G GS+IIDP +EKRF R++ +V H + Y+ GL L +A A L Sbjct: 514 GLAADAHQPFPGRVEATMYNFGSPRVGNHPFRYAYNKMVPGSFRVVTDGDVVAGLPPRLWYQHLGTEVIIDGDGGGSMIIDPSQMEKRFQTRARAHVRLHHMDCYRRGLAAILGEAQEAAVLSDL 638
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: A0A7R9Y9N9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9N9_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.340e-24 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 40 VDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYT-----HVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRG 330 V + ++FG PRVGN+ +A +N VVP+++RV VDGD V VP YT HVG +ID GRGSL++DP F+EK+F +S+R SHL +Y+ GL G Sbjct: 61 VGISCYTFGQPRVGNTAWARAHNMVVPNTYRVAVDGDLVTNVPKAGYTCLRWKHVGIGCIIDKEGRGSLLLDPSFIEKKFRTKSRRSFSSHLLNSYKRGLHG 162
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: A0A812RKV5_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RKV5_SYMMI) HSP 1 Score: 103 bits (257), Expect = 5.180e-23 Identity = 48/97 (49.48%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 40 VDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWWYTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGLRG 330 V + M++FG PRVGN +A YN +VP+SFR+VVDGD V GVP Y H+GT++++D G GS+IIDP FVEK +K + H Y+ GL+G Sbjct: 183 VRMCMYNFGTPRVGNWHFATEYNRIVPNSFRIVVDGDIVSGVPKGNYKHIGTEIIVDPLGAGSIIIDPSFVEKFLRTHNKTSMSVHSLVFYRRGLQG 279
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Match: K3WU34_GLOUD (Lipase_3 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU34_GLOUD) HSP 1 Score: 100 bits (248), Expect = 6.860e-22 Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 37 TVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDPVPGVPSWW--YTHVGTKVLIDGRGRGSLIIDPGFVEKRFFVRSKRYVFSHLTEAYQAGL 324 ++ ++M++FG PRVGN + YN VP S+RVV+DGD VPGVP +W Y HVGT++ ID G +LI+DP FVE+ V SK V +H + Y+A L Sbjct: 322 SMKVNMYNFGGPRVGNPSFCRHYNKCVPTSYRVVMDGDIVPGVPKFWGLYQHVGTEISIDLEG--NLIVDPSFVERHLHVSSKTKVATHPSSVYRASL 417 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5291.13433.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5291.13433.1 >prot_L-elsbetiae_contig5291.13433.1 ID=prot_L-elsbetiae_contig5291.13433.1|Name=mRNA_L-elsbetiae_contig5291.13433.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp GLEGEAEEASRGTVDLHMFSFGAPRVGNSIYAARYNDVVPHSFRVVVDGDback to top mRNA from alignment at L-elsbetiae_contig5291:5955..7942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5291.13433.1 ID=mRNA_L-elsbetiae_contig5291.13433.1|Name=mRNA_L-elsbetiae_contig5291.13433.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1988bp|location=Sequence derived from alignment at L-elsbetiae_contig5291:5955..7942- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5291:5955..7942- >mRNA_L-elsbetiae_contig5291.13433.1 ID=mRNA_L-elsbetiae_contig5291.13433.1|Name=mRNA_L-elsbetiae_contig5291.13433.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=924bp|location=Sequence derived from alignment at L-elsbetiae_contig5291:5955..7942- (Laminarionema elsbetiae ELsaHSoW15)back to top |