mRNA_L-elsbetiae_contig529.13431.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig529.13431.1
Unique NamemRNA_L-elsbetiae_contig529.13431.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A6H5KUU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU7_9PHAE)

HSP 1 Score: 464 bits (1193), Expect = 1.490e-154
Identity = 250/329 (75.99%), Postives = 276/329 (83.89%), Query Frame = 3 
Query:  243 MRVLSTATAVLAFDRTTVTGSSAFQVLVPSSGARRTVSAPRRSFVARSSPWAVPSVRRRAAAAPLWCASQTSDVAATPESKEAKKXXXXXXXXXXXAKKKMDKNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSVTS 1229
            MRV+STATAVLA +R TVT SSAFQVLVPSSG+ R+++A RRS   +  PWA   +RRRAAA PLWC SQT+DVAAT E K AKK  XXXXXXX   K K DKNSFVQWDMRRAAMKLHTRDQ+PKEGKQENKG  F+DWKPSRRGYLQFLVDSKVVYEALEE C SD RL+EFR+TGLER  +LTKDIAWMLETY D+ A E  GG+G   AP PT+NALEYASFL+E VA+SLP FMCHYYNHYFAHTAGGRMIGRKVAESCL+GRTLEFY+WG+D   DVK LLDGVR+KIDAMAK WS E+K ACV ET RTF+YGG LLSS+TS
Sbjct:    1 MRVISTATAVLALERGTVTSSSAFQVLVPSSGSGRSMAAARRSTSNKPFPWAASPLRRRAAAVPLWCTSQTTDVAATAEGKGAKKEEXXXXXXXGGVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTPFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLETYSDSWA-EGGGGDG--KAPSPTENALEYASFLREKVASSLPAFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYQWGAD---DVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTFKYGGSLLSSITS 323
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: D7FK52_ECTSI (Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK52_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 2.800e-144
Identity = 246/346 (71.10%), Postives = 271/346 (78.32%), Query Frame = 3 
Query:  243 MRVLSTATAVLAFDRTTVTGSSAFQVLVPSSGARRTVSAPRRSFVARSSPWAVPSVRRRAAAAPLWCASQTSDVAATPESKEAKKXXXXXXXXXXXAKKKMDKNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAES------------------CLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQ----YGGRLL 1214
            MRVLSTATAVLAF+R TVT SSAFQVLVPSSG+ R+ +A RRS   ++ PWA  S RRRAAA PLWC SQT+DVAAT E K AKK   XXXXXX   K K DKNSFVQWDMRRAAMKLHTRDQ+PKEGKQENKG  F+DWKPSRRGYLQFLVDSKVVYEALEE C SD RL+EFR+TGLER  +LTKDIAWMLE YPD+ A E  GG+G   AP PT+NALEYASFL+E VA++LPGFMCHYYNHYFAHTAGGRMIGRKVAES                  CL+GRTLEFY+WGSD   DVK LLDGVR+KIDAMAK WS E+K ACV ET RTF     + GR++
Sbjct:    1 MRVLSTATAVLAFERGTVTTSSAFQVLVPSSGSGRSTAAARRSSSNKAFPWAASSFRRRAAAVPLWCTSQTTDVAATAEGKGAKKEEGXXXXXXGGVKPKTDKNSFVQWDMRRAAMKLHTRDQSPKEGKQENKGTKFSDWKPSRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLEAYPDSWA-EGGGGDG--KAPSPTENALEYASFLREKVASTLPGFMCHYYNHYFAHTAGGRMIGRKVAESALGVFFKHVSAFPFRSDSCLDGRTLEFYQWGSD---DVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTFNLRVFFVGRMV 340
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A835Z600_9STRA (Heme oxygenase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z600_9STRA)

HSP 1 Score: 274 bits (701), Expect = 4.120e-83
Identity = 134/229 (58.52%), Postives = 163/229 (71.18%), Query Frame = 3 
Query:  540 KMDKNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSVT 1226
            K D NSFVQ +MR  AMKLHTRDQAP+EG+QE  G  FA+W P+R GYLQFLVDS+ VY   +EV  ++  L+  RDTGLER A+L KDIAWMLETYP+ A             PP + NA  Y +FLK+  A S+PGF+CH+YNHYFAHTAGG MIG+KVA+ CL G+ L FY+W SD    V+ LLD VR+ IDAMA  WS E+K  C++ET RTF+YGG LL S+T
Sbjct:    3 KADPNSFVQGEMRGVAMKLHTRDQAPREGQQEETGKKFAEWAPTRAGYLQFLVDSRAVYSTFDEVVGANDALAALRDTGLERTAALEKDIAWMLETYPELAT------------PPVSDNAAAYCAFLKDIAAKSVPGFVCHFYNHYFAHTAGGIMIGKKVADLCLGGQKLAFYQWASD----VRALLDAVRVNIDAMADGWSREEKDECLDETARTFKYGGSLLGSIT 215
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A6V1QVP2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QVP2_HETAK)

HSP 1 Score: 218 bits (555), Expect = 1.550e-61
Identity = 116/224 (51.79%), Postives = 147/224 (65.62%), Query Frame = 3 
Query:  555 SFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSVT 1226
            SFVQ DMR  AMKLHT+DQA +EG+Q+ +    + W P    YLQFLVDS++VY+ +E++C S   L +F++TGLER A+L +DIAWM E +     A    G+G             YA  L+E V  SLPGF+CHYYNHYFAHTAGG MIGRK++E+ LEG TLEFY+W  D    VKE+   V   IDA+A  WS   K  C+EETG TF+YGG LLS ++
Sbjct:   47 SFVQNDMRAYAMKLHTKDQA-REGEQKAQ-KPVSKWSPEPINYLQFLVDSRLVYQTMEDICNSTPGLEKFQNTGLERTAALDQDIAWMSEKFSVDVPAASPLGQG-------------YADVLREVVGRSLPGFVCHYYNHYFAHTAGGLMIGRKISEALLEGATLEFYKWAGD----VKEMGMAVIRDIDALADTWSDAQKQECLEETGNTFRYGGALLSHLS 251
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A8J5XQF0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQF0_DIALT)

HSP 1 Score: 209 bits (531), Expect = 9.900e-59
Identity = 111/224 (49.55%), Postives = 150/224 (66.96%), Query Frame = 3 
Query:  558 FVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSVTS 1229
            FVQ +MR+AAM LHTRDQA KEG+Q+ +    A W+P+R+GYLQFLVDS+ VY A+EE+    + L+  ++TGLER  +L KDIAW L              EGG     PT+ A  YA+ LK     S P F+CH+YN+YFAHTAGGRMIG+++++  L+GR LEFY+W    D DVKELLD  R  IDAMA  W+ +++ AC+ +T  +F+ GG L++S+ S
Sbjct:   11 FVQTEMRKAAMALHTRDQA-KEGQQQAQ-KPLAKWEPTRKGYLQFLVDSRHVYGAVEEIVGERAELATLKNTGLERTVALDKDIAWFLSD------------EGGCQPTTPTEAATGYAAELKRL---STPAFICHFYNYYFAHTAGGRMIGKQMSDMLLDGRVLEFYKW----DGDVKELLDAARQHIDAMAASWTQDERDACLAQTAASFKGGGGLMASLRS 213
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A7R9TEH2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TEH2_9VIRI)

HSP 1 Score: 208 bits (530), Expect = 2.350e-58
Identity = 108/218 (49.54%), Postives = 144/218 (66.06%), Query Frame = 3 
Query:  570 DMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCAS---DSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLL 1214
            +MR  AMKLHT++QAPKEG+ E      + W+P+R  Y Q+LVDSKVVY+ALEEV AS   DS L+ F+ TGLER  +L KD+ +    Y             G  AP PT+    YA+FL+E  A+ +PGFMCHYYN YFAHTAGGR IG+ +++  L+G+ LEFY W    +  +K+ +DGVR  I++MA+ WS E+K AC+EET  +F+Y G LL
Sbjct:   26 EMRAYAMKLHTKEQAPKEGQAEEPSKPMSKWEPTRELYAQYLVDSKVVYDALEEVVASAPADSPLAVFQSTGLERGPALAKDLEFFESEY-------------GIKAPEPTEAGSGYAAFLREKAASDVPGFMCHYYNVYFAHTAGGRQIGKMLSDMVLDGKKLEFYSW----EGVLKDHMDGVRGSINSMAEGWSEEEKTACLEETAPSFKYAGTLL 226
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: UPI00064D764F (heme oxygenase 1, chloroplastic-like n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064D764F)

HSP 1 Score: 203 bits (517), Expect = 6.180e-56
Identity = 107/226 (47.35%), Postives = 145/226 (64.16%), Query Frame = 3 
Query:  558 FVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVC--ASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSVTS 1229
            FV+ +MR  AMKLHT+DQA KEG++E KG   A W PS  GYLQFLVDSK+VY+ LE +   A+    +EFR+TGLER+ SL KD+ W  +               G   P P+   + YA +L+E        F+CH+YN YFAHTAGGRMIGRKVAE  L+G+ LEFY+W    D ++ +LL  VR K+D +A+ WS E+K  C+EET ++F++ G++L  + S
Sbjct:   69 FVE-EMRFVAMKLHTKDQA-KEGEKEPKGQPIAKWNPSFEGYLQFLVDSKLVYDTLERIVDKAAFPEYAEFRNTGLERSESLAKDLEWFKQQ--------------GHGIPEPSSPGISYAEYLEELSEKDPQSFICHFYNTYFAHTAGGRMIGRKVAEKILDGKELEFYKW----DGELSQLLQNVRDKLDRVAQSWSREEKDHCLEETEKSFKFSGQILRLILS 274
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A7S1TIA0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIA0_9RHOD)

HSP 1 Score: 204 bits (518), Expect = 9.690e-56
Identity = 107/229 (46.72%), Postives = 147/229 (64.19%), Query Frame = 3 
Query:  549 KNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCAS--DSRLSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAP--PPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSV 1223
            +  FV+ +MR  AM+LHTRDQAP+EG QE   +  ++W+PS R YLQFLVDSK++Y+ +E+  AS  D  LSEFRDTGLER+  L  DI W LET               +N P   P+  A +Y  +L   + +  P F+CH+YN+YFAHTAGGRMIG+ ++    +G+TL FY+W  D    VKE+L+ VR+KID +AK+WS + K  C+EET   F Y G +L ++
Sbjct:   85 RKGFVE-EMRFVAMRLHTRDQAPREGTQEESALPISEWRPSLRDYLQFLVDSKLIYDFMEQTVASTDDPMLSEFRDTGLERSGPLADDIQW-LET---------------QNVPRCEPSAAAKKYVDYLTNLLESRQPAFLCHWYNYYFAHTAGGRMIGKMMSTILFDGKTLRFYQWPRD----VKEILNDVRVKIDRVAKEWSRQVKDDCLEETSLAFAYSGTILGNL 292
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: C1E2W1_MICCC (Heme oxygenase n=2 Tax=Micromonas TaxID=38832 RepID=C1E2W1_MICCC)

HSP 1 Score: 202 bits (515), Expect = 2.080e-55
Identity = 106/230 (46.09%), Postives = 145/230 (63.04%), Query Frame = 3 
Query:  546 DKNSFVQWDMRRAAMKLHTRDQAPKEGKQE--NKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSR--LSEFRDTGLERAASLTKDIAWMLETYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSV 1223
            +K  FV+ +MR  AM++HTR+QAPKEGK E   +    A W+P+R GYL+FLV+SK VY+A+E + AS +     +F DTGLERA  L KDI W  +TY             G  AP       EYASFL++    S P F+CH+YN YFAH+AGGRMIGRKV+E  L+G+ L+FYRW   G  D   ++   + K++  A+ WS E+K  C+EETG++F+  G+LL  +
Sbjct:   79 EKKGFVE-EMRFVAMRMHTREQAPKEGKAEPAKEAKPMAQWQPTREGYLRFLVESKAVYDAMEAIVASGASPMYGDFVDTGLERAEGLAKDIEWFCQTY-------------GMEAPVADGPGAEYASFLRDISKTSPPEFICHFYNVYFAHSAGGRMIGRKVSEMILDGKELQFYRWDKPGGLDA--MMTRTKAKLNDAAEKWSREEKDRCLEETGKSFELSGKLLRLI 292
[Close]
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Match: A0A7S2V0C2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C2_9STRA)

HSP 1 Score: 203 bits (516), Expect = 3.200e-55
Identity = 108/228 (47.37%), Postives = 150/228 (65.79%), Query Frame = 3 
Query:  549 KNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQFLVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLE-TYPDAAAAEESGGEGGRNAPPPTKNALEYASFLKETVAAS-LPGFMCHYYNHYFAHTAGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKDWSPEDKAACVEETGRTFQYGGRLLSSVT 1226
            K SFV+ ++R  AMKLHTRDQA KEG+Q+ +   F  WKP+R+ YLQFL +SKVVYE  E++  +   L+ FRDTGLER+  L +D+AW+ +  Y D         EG        +N   Y++ L+E +AA  +PGFMCH+YNHYFAHTAGGRMIG+K+A+  L+  TL+FY+W    D DVK +   V   +D MA  W+ E K AC+E+T  +F+Y G L+S+++
Sbjct:  103 KPSFVKDELRSYAMKLHTRDQA-KEGEQKAQ-TPFTKWKPTRQQYLQFLAESKVVYECFEDLVNNTPELAAFRDTGLERSKPLERDLAWLTDGRYEDV--------EGVTIGAEDCQNGAAYSALLRELIAAGDIPGFMCHFYNHYFAHTAGGRMIGQKMAQLLLDSHTLDFYKW----DGDVKAMGAAVLKNVDEMAATWTDEQKQACLEQTKNSFKYSGSLMSAMS 316
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig529.13431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUU7_9PHAE1.490e-15475.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK52_ECTSI2.800e-14471.10Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835Z600_9STRA4.120e-8358.52Heme oxygenase-like protein n=1 Tax=Tribonema minu... [more]
A0A6V1QVP2_HETAK1.550e-6151.79Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A8J5XQF0_DIALT9.900e-5949.55Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7R9TEH2_9VIRI2.350e-5849.54Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
UPI00064D764F6.180e-5647.35heme oxygenase 1, chloroplastic-like n=1 Tax=Eryth... [more]
A0A7S1TIA0_9RHOD9.690e-5646.72Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
C1E2W1_MICCC2.080e-5546.09Heme oxygenase n=2 Tax=Micromonas TaxID=38832 RepI... [more]
A0A7S2V0C2_9STRA3.200e-5547.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig529contigL-elsbetiae_contig529:22750..32284 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score445.7
Seed ortholog evalue1.9e-122
Seed eggNOG ortholog2880.D7FK52
Preferred nameHY1
KEGG rclassRC01270
KEGG koko:K21480
KEGG ReactionR11579
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categoryother localisation
EggNOG free text desc.heme oxidation
EggNOG OGsCOG5398@1,KOG4480@2759
EC1.14.15.20
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionheme oxygenase 1
Ec32 orthologEc-04_005790.1
Exons6
Model size2533
Cds size990
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig529.13431.1prot_L-elsbetiae_contig529.13431.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig529 24051..32042 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816546.5913444-UTR-L-elsbetiae_contig529:22749..240501622816546.5913444-UTR-L-elsbetiae_contig529:22749..24050Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig529 22750..24050 -
1691683637.929713-UTR-L-elsbetiae_contig529:22749..240501691683637.929713-UTR-L-elsbetiae_contig529:22749..24050Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig529 22750..24050 -
1622816546.6761317-UTR-L-elsbetiae_contig529:32042..322841622816546.6761317-UTR-L-elsbetiae_contig529:32042..32284Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig529 32043..32284 -
1691683638.0051768-UTR-L-elsbetiae_contig529:32042..322841691683638.0051768-UTR-L-elsbetiae_contig529:32042..32284Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig529 32043..32284 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816546.6069915-CDS-L-elsbetiae_contig529:24050..242521622816546.6069915-CDS-L-elsbetiae_contig529:24050..24252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 24051..24252 -
1691683637.9414148-CDS-L-elsbetiae_contig529:24050..242521691683637.9414148-CDS-L-elsbetiae_contig529:24050..24252Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 24051..24252 -
1622816546.6195838-CDS-L-elsbetiae_contig529:24831..250581622816546.6195838-CDS-L-elsbetiae_contig529:24831..25058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 24832..25058 -
1691683637.9508946-CDS-L-elsbetiae_contig529:24831..250581691683637.9508946-CDS-L-elsbetiae_contig529:24831..25058Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 24832..25058 -
1622816546.6296966-CDS-L-elsbetiae_contig529:25909..260391622816546.6296966-CDS-L-elsbetiae_contig529:25909..26039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 25910..26039 -
1691683637.960698-CDS-L-elsbetiae_contig529:25909..260391691683637.960698-CDS-L-elsbetiae_contig529:25909..26039Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 25910..26039 -
1622816546.6402285-CDS-L-elsbetiae_contig529:27165..272941622816546.6402285-CDS-L-elsbetiae_contig529:27165..27294Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 27166..27294 -
1691683637.9706588-CDS-L-elsbetiae_contig529:27165..272941691683637.9706588-CDS-L-elsbetiae_contig529:27165..27294Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 27166..27294 -
1622816546.650402-CDS-L-elsbetiae_contig529:28314..284461622816546.650402-CDS-L-elsbetiae_contig529:28314..28446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 28315..28446 -
1691683637.9804804-CDS-L-elsbetiae_contig529:28314..284461691683637.9804804-CDS-L-elsbetiae_contig529:28314..28446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 28315..28446 -
1622816546.6619534-CDS-L-elsbetiae_contig529:31872..320421622816546.6619534-CDS-L-elsbetiae_contig529:31872..32042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 31873..32042 -
1691683637.9918878-CDS-L-elsbetiae_contig529:31872..320421691683637.9918878-CDS-L-elsbetiae_contig529:31872..32042Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig529 31873..32042 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig529.13431.1

>prot_L-elsbetiae_contig529.13431.1 ID=prot_L-elsbetiae_contig529.13431.1|Name=mRNA_L-elsbetiae_contig529.13431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=330bp
MRVLSTATAVLAFDRTTVTGSSAFQVLVPSSGARRTVSAPRRSFVARSSP
WAVPSVRRRAAAAPLWCASQTSDVAATPESKEAKKEGGHGGGHGGGAKKK
MDKNSFVQWDMRRAAMKLHTRDQAPKEGKQENKGMSFADWKPSRRGYLQF
LVDSKVVYEALEEVCASDSRLSEFRDTGLERAASLTKDIAWMLETYPDAA
AAEESGGEGGRNAPPPTKNALEYASFLKETVAASLPGFMCHYYNHYFAHT
AGGRMIGRKVAESCLEGRTLEFYRWGSDGDADVKELLDGVRIKIDAMAKD
WSPEDKAACVEETGRTFQYGGRLLSSVTS*
back to top

mRNA from alignment at L-elsbetiae_contig529:22750..32284-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig529.13431.1 ID=mRNA_L-elsbetiae_contig529.13431.1|Name=mRNA_L-elsbetiae_contig529.13431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9535bp|location=Sequence derived from alignment at L-elsbetiae_contig529:22750..32284- (Laminarionema elsbetiae ELsaHSoW15)
GCCCCCATCGGCTCGGCTCGGGGTGGAACTAACTGCTGTGACACGCACAC
ACCGCCGTATCCTAAGAGAATAAGCCGCGGCCCGGAAGATATCAGATCAG
AGCACCTGAAGAGAAGAGCTTCTTTCGAGAGATAGTCTTAACTTTTCCTG
TGTCACCCCGTAATCGGCAACTCAGTGACGCCCCGCTTCAACAGGCGCTT
CGCTCACGCAGAAACCTAAGCGCGGAGACCTTTTAGTCAATCATGCGGGT
GCTCTCCACAGCCACCGCTGTTCTGGCGTTCGACCGGACGACCGTCACCG
GCAGCAGCGCCTTCCAGGTCCTAGTGCCGTCCTCCGGAGCCAGGAGGACG
GTGTCAGCACCGCGGAGGTCGTTTGTCGCGCGGTCATCTCCATGGGCTGT
GCCATCCGTCAGGTATACCACGGTGTGCGTGTCGGGGATTTGGTTGAGAT
GAAGTGGGGGTTGAGAGAGAGAGAGGGAGGGAGAGAGGCCGGGGGTTTCT
CTACGAACAAGATTCTGCTGCTGTCGATCTCTGCGGAAACTGCTTGTACA
CATTTAGACATGAACCAAGAATCGAGGTCTCTGCGTGTGTTCTTGCCGGA
CCAGACGAGAAATTGGTGTTTTGTGTGATGTACCCAAACTTTGGATCTGT
CGTTGAAGCTGTGGCTTCGGGTGGAGGGCTACTATAGCCCTCCAACGCGG
TTTAAAATAAGCTCTTAACTGGGTAAGACGCCCTCTGCTGAAATTGCACG
CTAAACACAGCGAGTTTGTAGCTAAATAGTCTCCAAAATTAAAATCCGGC
ACACGCGGCCGTCGCTCGCTCGGCACACGCCCCCCCCCCGCCCTCCCTCG
TAAAGTACCTGCGAACACGAAAACACACACATTCACAAATCGCCCCTGGA
CGTGACATCCCTCTCTCCTGGCCATCTGGCGTTGTAAGTTGCCAGCTGGT
GGCGCGCACACACACGCACACATGATATTTTTATATTTTTCATTCCAATG
GTCAATGGTTGCCCCCAATATTGTTGGCGACGATTCCGCCGCACTTTTTC
CGCGCCGTCTTTTTTCGACAGAGCTACAGCAATAGGCCCCCGTTTCTGTT
TGTAGAGGTGGGAATATAATCGTGTGGTGTTGGTAGAGTACCCCAAGCCG
AAAAATTCCGGTCGGAGGGCGGTTGTGTCGGCCGGGGAGGAAAAATAGCG
TTTTGGGATAAAAGTCGGAGATACGGAGGCATTTCAGGTATGTAGGCGGG
GGCACACATATTCACCGATGCCCCGCGTTGTGCTGGCTCTCTCTCCCCAT
TTTCACAGTCCTGATTTCTCTCTCTTTCACCAGGCTATGTCGTTGGGCAC
TCTGATATTTCGGGGACAAGCGTCTTCTACGAGCGGAAGTTTGGCTTTTT
GGCATCTCTGTTATCTCAGCTACAGGATGCATCGAAGACGTTGTTGTCTT
GTGTCTGCCAGCTGCTCTGCCCGTATATATCCAAGTGGTTTTGAACGGTT
CCTCAAGGGGGCGCCCAAATTGTCATATTCCGCCTCGGCGTACATAAGGC
GGCGGGCCCACTCTCCCAATGACACTGCCTTCTAGACTAGTTCGTGTGTT
GTGTGTGTCCTTCCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACG
TGTACTACACCTCGCGGTGTACTTAGAGGTACTAACTACACTTTGCAGTG
CATCTGTCTGTACAACTAGAACCAACCGGGGTCACACAGGAGGGGGTGAA
CACTGGGGCTTAGACTACCTACTGTAGGTGACACAAGATACCACACCCCC
TGGATCGAATTTGAGAGCACCATTACTCCGTGACGAAGAGGGTGCCATCA
CCAAACGGCACATTTTCGGACAGCCCTCGACTAGACCTTTCCAAACGTCA
CCCCTTTGGGCACTGGCACTCTTCTCGCTGGGGAGGAATCGAGCTTTGAA
AATATGTCCAGGGGGTGTGGTATCTCGTGTCACCTACGGTATTTAACAGC
GGTCGGTACCGGCCCGCTAGGAAGGAAGCTCCGAGTAAGAAACTTACACA
GCATGAGATTTTCAAATTATCAAGAAAGTGTCCAGCCTGGGCAGGCGGCG
AGTGCCTCTCTAAATCCTACACATTACAAAATAAAGTGTTATATATGCTC
GATTTCCAACCCAACAAAGAAAGTCAGCCTGACCGGTACTACTACTGCTG
TTGTAGTCTTTTTTTTTCTTTTTTTTCTTTTTTTTTTCTTCTGCACATTT
ATTTCCAGTGCTCGATGGGCTCCCTGTCACGAAGACATCTTGCCAGAGTA
CTGAACCGTGGTTACACAGAAGGGTTCCTTTCCCGAAGTCTATTACCTAC
TGCTGTCTACATCTAAAAAATAAATAAACAATGAATCAAAGATGGAACCT
ACCCCACACTAGAGCAAGGACTCGATATGAGGTTCAAACGGTATTCCATA
CAGTGACGTAATATTTGTCGAAGCGAGCAGAAAAACAACCTAAATATCAG
AAGAGTTCAACATCTCCCCTGCAAAGATTTAAGATTTGCGAGGTCGGCCA
ACAATTATTCCGGCGGGTGGAGCCCACCGTGATGCCGTAATGTTGTCATC
CTCTTTTTGTACAATACATGACACATGCGACTCCCGGTTTTCCGGCGTTT
GACTGTCCGCAAGTGTTGATTCTCGAATGCGATGTTTTCGTAGGTACGTA
CGTACATAAATACGGAGTATTTGAAGTAGGAGGGGACACAAGAAGGCAGG
CTCCCGAACGAAAGTCACTCTATCTGTGTGTGTCCCTCAACATTTCGGGG
TATCACACCAGCGGCTACAATAGTGTCCGTAGACCCCTCGGCAAGCTGAA
CGGACCCCACCCCACGAGCCTCTTCTGTAAGCAAGGTGACTTGTCATGCA
GGCGAAGTACAGCACTTTTTTTTTCAATTTTGTCTTCTTCTTCCTCCCAT
TATTGGCATCGTCGTCTGCCCCACTGGCCCCATAGTCCACGACGACTAGC
TAGACGACCCAACCTGGGTCACACAGGAGGGGGGGAGGGGGGGTGGGCCC
CTCCTGCGATGCCTGCCTGTGGTGCTTTTTTCGCGAGCAGGGTTCAGCAC
TCCCCACCCTCGTCGTCAACAATGAAGTCGAAGTATTATTTACTAACGAA
ATCGCTTTCAATTTTCAATGCACTCACTACCAGGCGATGTCGTCGACGTC
GTCTTGGTCTTTATGCTACCAAATCGTCCCGACTTGTACCCACCGCCTTT
GCAGCCAAGGCTCTAATTGATCCAAAAGTACCTTGTATCAATTGATCTAC
CTTGTATCCTGGAGTACTGTTGCTCTGCTGCCAGTTTAGAGACAGGAGGA
TATTGCCAGCGATGAAGACGATGAGGGTGCCTCGGCGAGCCCTCCGACCC
GGCGGACACCCGGCGTGCAACACATAACAACAGCACTAAACAGTGGTCTT
TAGGTTTGCAGCCACACCTGAAGGAATGCGATACCCATGCCCAAAGTCTA
TAGAGTAAAGGCCATACATAGAGATGTTGTTCTGTTTGCTGTTGCACACC
GTCGTGCACGGCCAAATGACCGAGCTGCATGTATGTGTACCCGCTTCCAA
TCCCTCCATCTCCTTTACCCGCCCCCCCCCTCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCTCCCC
CTCCCCCCCCGCACAAGCCTAGACGTATACCCCCCCCCCCCCCCCCTCCC
CCGTTGTTTCAATAAAAATGGGTAAATTCATACCACCACCACATCACAAC
TATACATACACGCTGCTGCGATTTTCTGGCTCGTGCAGGCGTAGGGCGGC
GGCCGCACCGTTGTGGTGCGCGTCGCAGACGAGCGACGTTGCCGCCACGC
CGGAAAGCAAGGAGGCCAAGAAGGAGGGCGGGCACGGGGGCGGGCACGGC
GGCGGGGCGAAGAAGAAAATGTGAGGGTCTTTTTTTTTTTTTTTTTTTTT
TATTAATGTCAAATGTTCTTTCTACTGCATCATATACAATTGTTCTTTTT
TATCACTGTTAAAAAAATGTTCCACCAACAAATGTTCTTTTTTTTTCAAT
GTTAATGTTCTATTATAACTACAAATGTGTCAGCGGCCCACCCACGTCCG
GTCTGTGAAAAAATCGTTTCGGGGAGATGCTGCAGGCACACAACAGTTAC
CCTCTTCCTTCACCGTTCCAATCCAAGCTATGTATCAACAGGCACAAGAT
CCACAAACCGTTTTTTTTTGTTTTTTTTGGTTCGCTATTTATATAGTGAT
ACCAGTCATTTCGGAGCGTCTGTTCTTTTTTGGGGGGGGGGTTAGGGTCG
TCCCTCCCTGGTGTCGTCGGGGCTAGTGTGTGTGTGCGGGCGAGGAAGGC
AAGAAGAGTGCGAGTGCCGTCGGGGTATGCCACGCGCGCTTGGCGAGTGC
TAAAATAACCGGGAGTGTTTCCACCGCGGGGCACGTTCGCGGACGGTGTC
GTTGTCGTCGTCGTCGTCGTTGTTGTTTTTTCGTCGTTGTTGCTGTCGTT
GTTGCTGTCGTCGTTGTAGTTGTTGTTGTCAAGTATGGTTTGCTTTCATG
CGCTTTACGTTATTTTTTCGCGTGCCCTTTTTCTCATCCGGCCAGGTCGC
CACTTTCGTCTATGTATGCCATGCCACATTCCCGCCGTATCATGAAACCA
TGTCCCACCGGGGAGGGGGGGGGGGGGCGATGGTTTCGCGGCTCGAGCAA
GATGCTGGAGGACACCCACCGTATGTACCCGTGTTCAAGTTAGCGTCTCC
CCCCACAAAGAGCCGTCGCCGCGATCTATCGATGGTATATACGTTGTTGT
TGCAAAACGGCACCTACATACGTACCTATAAGAAAATAGACATGTATATA
GATATATGTATGTATATCCACCAACGCAGTGTCCTATTTACCTGTCACGC
GTGCTTTGGTTGTTGCGATGGGGAAAAAAAAAAAAAATAGGGACAAAAAT
TCGTTCGTGCAGTGGGATATGCGCCGGGCAGCGATGAAGCTGCACACAAG
GGATCAGGCGCCCAAGGAAGGCAAACAGGAGAACAAGGGGATGTCTTTCG
CCGACTGGAAACCTTCAAGGTGTGTTTGTTGTCTGTGGTCGTTTGTTTAT
TGTTTATTGTTTGTTGTTTGTTTTGGTTCTGTTTTTTTTCTTTTTTTCTT
AAGGATACGATACATTTGTTTACCAGCGCTCGGACTAGGGCCCGAGCAAA
TTTAGAAGCAGCGCACCATTCCGGTAGCTGCGTAGTAACCGCAGTAATTT
TATCTGGTGGTTTTGCTCTTGCAGAGGGGGATTGTTGGCCAAAGATGTGG
GACATTTCTCTTCCCGCGAGGTGCACGCCATAATTTGTTCAGAAACGACT
GGATTCGAAATCCCCGTCGTGGAACGCGCACTATTTCAGCCCGATTTCGG
CTGGTTTCTCGGTGTGCAACAATGTGCCAACCCCCCCAGCAGACCGCCAC
CGTCGATTTAACAACTTGCGGCGGTGGAAAGTAGAGTTGGCAATCTCGTG
TCGCATGTACGTACACACGGGTTTCATTTCATGTTTTTTGCCCACTGTCA
TTGGCCGAAAACGCCCGCCGAACAAGGGTACCGTTGACTTACCGCAGGTG
ATTTTCAGTCGTAATTTTGAGGCCGTCGTGCGGATGGGCTTGTTTGTCTT
GCTCTCTTTGGTTCATCCTTTCCGTTGGACACGGTTTTCTCTGCTAGTGC
TGGTGCTGGTGCTGGTGCTGGTGCTAGTGCTAGTGCTGGTGATGGTGCTG
GTGATAGTGCTAGTGCTGATGCTGGTGATAGTGCTGGTGATAGTGTTGGT
GCTAGTGCTAGTGATAGTGTTGGTGCTAGTGCTGGTGCTAGTACTGGTGC
TAGTGCTGGAAGAGTTGATGCGCAGAAAGAGTTGACTCGCAGAAAGAGTG
GACTCGCAGAAAGAGTGGACTCGCAGAAAGGTTTGACTCACAGAAAGAGT
TGACTCACAGAAAGGTTTGATACGCAGAAAGGGTTGACTCACAGCAGAAC
CCCGGGCGGAGACAAAATGCCGTGTGGGTTCGATTCCTACCAGCCCCAAG
GCAACAGAAGAAACGCTCCACGATTTACGTCTGTCCCTCCTTCCTCCCCC
CCCCTCGCTCTACCCCCCACCTGCCCTCGCTTGCACGCTTGCTCGAAATT
GCCCCCCCCCCCCCCACCCCCTACCCCACTCGGCGTATTTTACAGACGAG
GGTACCTGCAGTTCTTGGTGGATTCGAAGGTTGTGTACGAGGCGTTAGAG
GAGGTGTGCGCTTCGGATTCGCGACTGTCGGAGTTCCGAGACACCGGCCT
AGAGCGGGCGGCGTCGTTGACCAAGGTGTGGTGTGGTGCGGTGCGGTGCG
GTGCGGTGCGGTGCGATTTGCGCGGGAGGCGTACTCATGACTTGACTACT
GTAGTCTCGCGGTGCTGGCCGCTGTAGCCTGCGCTGCTACGGGTTTCCCA
AATGGGCTAACTCTCGACGCAGAGACTGCACCAACTGGGACGTACACGCG
CGGAGAGCAGAGCAGAGCAAGGCAAAACAAGGCGCCACTCTTTTTGCAAG
AATACCGTAGGTGACATGAGATAAGACACCCCCTGGACCGATTTTCAAAG
CTCAAGTACTCCACAGCAAGCAGAGCGTCAGTCCCAAAAAGGGCGGCGTT
GGAAATATCTCGTCGAGAACTTTCCGAAAATGTGGCGTTTGTGGTTAGAA
TTGTATTCGTTGCGGAGTAACCAAGCTTTCAATATGGATCCAGGGGTGTC
TTTTCTTATGTCACCTACGGTACTTGTTGGCCGACCTCGCAAATCTTTGC
AGGGGAGATGTTGAACTCTTCTGATAGTTTAGGTTGTTTTTCTGCTCGCT
TCGCCAAGTATTACGCCACTGCTGTATGGAACACCGTTTGAACCCCATAT
TTGCTCCTTGCTCTATAGCTAGTGTGGGGTAGGTTCCATCTTTGATTCAT
TGTTTATCTTTAAAGAATAAAACAGGTTCGCTTTTTGCCCTGAACCGGCA
AGCCAGCAGGCGTCTGCCTCTCTCGTGTGGTGGGTGTTGTGTTGGTGTTG
GTGTTGTGCTATAATTGACGTGGAAAATTCTTCCCTCTGTTGCCGTCTTC
TGCGCGCTGTTTTTCTTCGTCTCGGCTTTTCCCTTTCCGACCGGCGGGCG
CACAAAACGAAACAAAACACGAACAGGACATCGCGTGGATGCTCGAGACG
TACCCGGACGCGGCCGCCGCGGAGGAGTCGGGGGGGGAGGGGGGCAGGAA
CGCCCCGCCCCCCACCAAGAACGCCTTGGAGTACGCGTCGTTCTTGAAGG
AAACGGTGGCGGCAAGCCTGCCGGGGTTCATGTGCCACTACTACAACCAC
TACTTTGCGCACACGGCCGGCGGCAGGATGATCGGGCGCAAGGTGGCCGA
AAGGTGAGGCAGAGAGATGGATGCTACATATTCAATTGTTTTCATATTTT
GTGACGGGATATAAACATTACAGAGTGCATCAGCACCTTATTGGAGAAAG
GCGGCATCGTAGGGCTGCTGGGTTGAGAGGTATTTTGCTCGGCATTCTTG
TGAAGTGTGGGGGACAACTACGCTGTAGGTGCCCAGTTTTTCGTCACAAG
AGGGTGCGTGCGCAGTGCGTGCGTGTGTTGGTTTGAACCCTTCCCCCCCC
GGAAGCCTTGCGAGGCACATTCAACGAGAAACAGAGTGCACCTTGTAGAC
AGAAACAACATGGACAGGCTGCTGCTGCTGCTGCCGCTGCTTGAATTGGT
TTCGCCTTAAACGCCCTCCTGGTGGCCCACTAACCTGGCTGGCCTCTTTT
GTCTACTTTTCTGTCGCAAGCCTACTCTGCCCTCCACGCTTGTCTCACGT
ACACCGACTCCCCCCTCCCCCCCCAAAAAAAAAAAACAACAACGCCAATC
CTGCCTCCTTCCATCTCACGGCCTCCATCCTGTCACCCCACTACGCTACC
CTGCCCTGCCCTACCCCGCCCTGTCGGGACAGCTGCCTTGAGGGGCGGAC
GCTGGAGTTTTACCGGTGGGGGAGCGACGGAGACGCGGACGTGAAGGAGC
TGCTCGACGGGGTGCGCATCAAGATCGACGCCATGGCCAAGGACTGGAGC
CCGGAGGACAAGGCGGCTTGCGTCGAGGAGACCGGGAGGACATTCCAGTA
CGGGGGCCGGCTCTTGTCGAGCGTCACCTCCTGAGCTGATGTTTAAAATT
CATGCCGTGCTTGATGGATCCATCGATCGCTGGATGTTACACGCCGTGTC
TGATGGATCGATCGCATCTCTTCCATAATAATACCACCGCCACTGTCTGT
TGTGTTCGTGTCCGCCAGTTCAGTCGGGCAGGCGGCCTGCTTTGCGACAA
AAGGAATCCTTTTTTTTTTGCTTTTTCTCTTTTTTTTTTCTGATTGTTTT
TTTCGGCTTGACTTGACCGCGTTGGCCGATGTAACGAGAGACAGAGAACG
AAAAGTGATTTTTATGTCGGCGTGTGTAGTTTTTTTGATGCCATGCGATT
CGATGCGATGCGATGGAGCCTGGAGCCTGGAGCCTGGTTGGTTTTGAAGT
TTTATCGACGTGTTCTATTAGTTTTTTTTTTTTTGGGGTTCGCGCGGGTT
TGGGGTGTTTTTTCCGGTCGAAAGGCACGACGCGGATCGGGGCTGCTTCT
AGAGTCGCGCGCGCGCGCATGCATGCACACACCTTCGTTTGATTTCGCCT
TCCTCGCCGTATTGGTTGGTGATGCCTGGATAAGTAAGTGGCTGTGTGAT
GGGCGCAGGCAGCGATTGGTTGTTGTTGACGGCACATGAGGGGGATATCG
CTCCCGAAACATAAGGAGTGACGTGACGACTGCTATTGTGAGGGGCGTGG
ATGTGGGATTCTGCAGGGGTTTTCTCGTGTGGTGGAAGGGGACCATATTT
TTTAAAATAAACAATGAATCAAAGATGGAACCTACCCCGCACTAGAGCAA
GGACTCGATATGGGGTTCAAACGGTATTCCATACAGTGACGTAATATTTT
GTTTGATATGTTGCATCGAATTCGCAAGCTTATGTGTGGCGGTCAAGCGT
TCCACGTAGTTGTTAATAAGCGTGTACTAAATACGATACGAAGAAAGGGG
AGAAACACACAAAAATATTCTAGTCAAAAGGGTTGAAAGATGAGCGCCTG
GCAAAAGATGCGAGTGTAAGAGAGCTCTGTTTTTTTAGTGGGTCCTCTCT
TTCCGTGTGACGCCATCCTTTGATGTGTGTTGTGTGTTTTCGTCCCATTT
ATTCGGGTGCCTGCCACACGCTTGGGTGTGTGAACAACATGCACGTTGCG
GTGCTGCTTTCGTTGTACAGCATGACGTATCCGCCGGGGTCACAAGGGAG
GGGGTAAACACTGGGGCTTTTTTCGCGCGGGGAAAAAGAAGATGGCGGTG
ATATTACATCTGTATGTGTGTATGTTGAGCACTGCAGTAATAAAAGTCGA
ACCGAATACGATCGAGCGCTGAGTTACACGGTGAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig529:22750..32284-

>mRNA_L-elsbetiae_contig529.13431.1 ID=mRNA_L-elsbetiae_contig529.13431.1|Name=mRNA_L-elsbetiae_contig529.13431.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1980bp|location=Sequence derived from alignment at L-elsbetiae_contig529:22750..32284- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGGTGCTCTCCACAGCCACCGCTGTTCTGGCGTTCGACCGGACGAC
CGTCACCGGCAGCAGCGCCTTCCAGGTCCTAGTGCCGTCCTCCGGAGCCA
GGAGGACGGTGTCAGCACCGCGGAGGTCGTTTGTCGCGCGGTCATCTCCA
TGGGCTGTGCCATCCGTCAGATGCGGGTGCTCTCCACAGCCACCGCTGTT
CTGGCGTTCGACCGGACGACCGTCACCGGCAGCAGCGCCTTCCAGGTCCT
AGTGCCGTCCTCCGGAGCCAGGAGGACGGTGTCAGCACCGCGGAGGTCGT
TTGTCGCGCGGTCATCTCCATGGGCTGTGCCATCCGTCAGGCGTAGGGCG
GCGGCCGCACCGTTGTGGTGCGCGTCGCAGACGAGCGACGTTGCCGCCAC
GCCGGAAAGCAAGGAGGCCAAGAAGGAGGGCGGGCACGGGGGCGGGCACG
GCGGCGGGGCGAAGAAGAAAATGCGTAGGGCGGCGGCCGCACCGTTGTGG
TGCGCGTCGCAGACGAGCGACGTTGCCGCCACGCCGGAAAGCAAGGAGGC
CAAGAAGGAGGGCGGGCACGGGGGCGGGCACGGCGGCGGGGCGAAGAAGA
AAATGGACAAAAATTCGTTCGTGCAGTGGGATATGCGCCGGGCAGCGATG
AAGCTGCACACAAGGGATCAGGCGCCCAAGGAAGGCAAACAGGAGAACAA
GGGGATGTCTTTCGCCGACTGGAAACCTTCAAGGGACAAAAATTCGTTCG
TGCAGTGGGATATGCGCCGGGCAGCGATGAAGCTGCACACAAGGGATCAG
GCGCCCAAGGAAGGCAAACAGGAGAACAAGGGGATGTCTTTCGCCGACTG
GAAACCTTCAAGACGAGGGTACCTGCAGTTCTTGGTGGATTCGAAGGTTG
TGTACGAGGCGTTAGAGGAGGTGTGCGCTTCGGATTCGCGACTGTCGGAG
TTCCGAGACACCGGCCTAGAGCGGGCGGCGTCGTTGACCAAGACGAGGGT
ACCTGCAGTTCTTGGTGGATTCGAAGGTTGTGTACGAGGCGTTAGAGGAG
GTGTGCGCTTCGGATTCGCGACTGTCGGAGTTCCGAGACACCGGCCTAGA
GCGGGCGGCGTCGTTGACCAAGGACATCGCGTGGATGCTCGAGACGTACC
CGGACGCGGCCGCCGCGGAGGAGTCGGGGGGGGAGGGGGGCAGGAACGCC
CCGCCCCCCACCAAGAACGCCTTGGAGTACGCGTCGTTCTTGAAGGAAAC
GGTGGCGGCAAGCCTGCCGGGGTTCATGTGCCACTACTACAACCACTACT
TTGCGCACACGGCCGGCGGCAGGATGATCGGGCGCAAGGTGGCCGAAAGG
ACATCGCGTGGATGCTCGAGACGTACCCGGACGCGGCCGCCGCGGAGGAG
TCGGGGGGGGAGGGGGGCAGGAACGCCCCGCCCCCCACCAAGAACGCCTT
GGAGTACGCGTCGTTCTTGAAGGAAACGGTGGCGGCAAGCCTGCCGGGGT
TCATGTGCCACTACTACAACCACTACTTTGCGCACACGGCCGGCGGCAGG
ATGATCGGGCGCAAGGTGGCCGAAAGCTGCCTTGAGGGGCGGACGCTGGA
GTTTTACCGGTGGGGGAGCGACGGAGACGCGGACGTGAAGGAGCTGCTCG
ACGGGGTGCGCATCAAGATCGACGCCATGGCCAAGGACTGGAGCCCGGAG
GACAAGGCGGCTTGCGTCGAGGAGACCGGGAGGACATTCCAGTACGGGGG
CCGGCTCTTGTCGAGCGTCACCTCCTGACTGCCTTGAGGGGCGGACGCTG
GAGTTTTACCGGTGGGGGAGCGACGGAGACGCGGACGTGAAGGAGCTGCT
CGACGGGGTGCGCATCAAGATCGACGCCATGGCCAAGGACTGGAGCCCGG
AGGACAAGGCGGCTTGCGTCGAGGAGACCGGGAGGACATTCCAGTACGGG
GGCCGGCTCTTGTCGAGCGTCACCTCCTGA
back to top