mRNA_L-elsbetiae_contig528.13415.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LK90_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK90_ECTSI) HSP 1 Score: 217 bits (552), Expect = 1.990e-65 Identity = 129/315 (40.95%), Postives = 180/315 (57.14%), Query Frame = 1 Query: 1 VKQLRFGRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVTAACEVSFLRAVVIDSPENGRKGRNARFVFRVTTGVQRG-KGRARCPPNGYVHTSIHRCMLHDGSRYLITHPRNNKKKHSQETPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDCVLWSSAPA 918 V Q+R G VN K VR W+PR+LS+ G VLK C + R +C+ F + V ++ ++GR ++ RFVFRV+TG RG K +AR G +S M + T + S +TPRA N D F P + G ++S +D PL+PGQ LST PV DSA + +T++GD+V R+G +P +P++ P+WAHRV GS GG AN + CA+E W R +PV+L VKNGRWRVGRGW+CTLGR P AG WR+H P D G+ ++ A L++ ++ E V WSS+P+ Sbjct: 8 VVQIRQGTVNLKTF-VRWWKPRQLSLVDGFVLKLCKMTRAGQEKSCQ--FNQVVRVEG-KHGRPRKDGRFVFRVSTGTPRGLKNKARELNAG---SSAALDMWMSVLEGVTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQILSTAPVVDSANLEVTEVGDLVLRRGDIPAYPSDHKPLWAHRVTGSVGGTANWRLGCALEVWWHRATNGGEGMGVPVHLVVKNGRWRVGRGWMCTLGRIPSVAGGWRVHLPWDSHGKTLKAALLQLCDGSVVMATGEGDVAWSSSPS 315
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: A0A6H5KV41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV41_9PHAE) HSP 1 Score: 221 bits (563), Expect = 6.700e-64 Identity = 123/315 (39.05%), Postives = 183/315 (58.10%), Query Frame = 1 Query: 10 LRFGRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVTAACEVSFLRA---VVIDSPENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCM-LHDGSRYLITHPRNNKKKHSQETPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDCVLWSSAPA 918 +R G V K V WRPR+LS+ + L+ C + R +C+ L + VV ++G ++ RFVFRV+TG RG R + + + M + +G + T + +TPRA + + F P + G ++S +D PL+PGQFLST PV DSA + +T++GD++ R+G +P +PT+D+P+WAHRV GS GG ANGG+ CAVE+W R +PV+L VKNGRWRVGRGW+CTLG+SP+P G WR+H P D G+A++ ASL++ ++ + +LWSS+P+ Sbjct: 305 IRQGTVRVKTF-VSWWRPRQLSLVDSSTLRLCKMARVGGAKSCQDMPLDSSTEVVRVEDKHGTTSKDGRFVFRVSTGTPRGLTNKRWELDAGSSADLDKWMSVLEG---VTTRDTQKETDFFGDTPRAGDLGNSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLELTEVGDLILRQGDIPAYPTDDTPLWAHRVTGSVGGTANGGLGCAVEAWWERATNGGQDMGVPVHLAVKNGRWRVGRGWMCTLGQSPRPVGGWRVHLPWDSHGKALKAASLQLRNGSVVMATEDGHILWSSSPS 615
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI) HSP 1 Score: 222 bits (566), Expect = 9.180e-63 Identity = 132/317 (41.64%), Postives = 190/317 (59.94%), Query Frame = 1 Query: 10 LRFGRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVTAACEVSFLRA---VVIDSPENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCM-LHDGSRYLITHPRNNKKKHS-QETPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDC-VLWSSAPA 918 +R G V K V WRPR+L++ + LK C + RG +C+ L + VV ++GR ++ RFVFRV+TG+ RG R + + M + +G +T P K+ +TPRA + D F P + G ++S +D PL+PGQFLST PV +SA + +T++GD++ R+G +P +PT D+P+WAHRV GS G ANGG+ CAVE+W R IPV+L VKNGRWRVGRGW+CTLGRSP+ AG WR+H P D G+A++ ASL++ D ++V+ +ED +LWSS+P+ Sbjct: 555 IRQGTVKVKTF-VSWWRPRQLTLVDASTLKLCKMARGGGVKSCQDMPLDSSTEVVRVESKHGRPRKDGRFVFRVSTGIPRGLTNKRWELDAGSSADLDTLMSVLEG----VTTPDFEKEADVFADTPRAGDLGDSFKFSMELGPFTFAPTPAFRGDSISIDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTANGGLGCAVEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQVR-DGSVVMATEDGHILWSSSPS 865
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LQD2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD2_ECTSI) HSP 1 Score: 204 bits (519), Expect = 2.360e-60 Identity = 125/310 (40.32%), Postives = 174/310 (56.13%), Query Frame = 1 Query: 19 GRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVT-AACEVSFL---RAVVIDSPENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCMLHDGSRYLITHPRNNKKKHSQE-TPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRK------DIPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDCVLWSSA 912 G+V FK VRGW+P +LS+ +G+VL+ C KRG A+C+ L VV S ++ K N RF+FRV +G RGK + + + + + + P +++ + + P A N D S S EP + G +SP D PL GQFLST + DS V IT+IGD++ R G +P F + P+WA+R GSTG KA+GG+ C +ESW R DIPV+L VKNGRWRVGRG LCT+G+SPKP GSWR + P D +G+A++ A L + ++V + LWSSA Sbjct: 6 GKVLFKT-MVRGWQPGDLSLVAGSVLRLCHTKRGFANHASCKEQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTKWTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLDGAPLAQNLGDSSVTSSKLEPDTPDASPAFRGHVMSPGDYPLQTGQFLSTASLVDSTNVEITEIGDVIVRAGDIPAFSGDKPPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTDDDIPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGETLWSSA 314
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LQD9_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD9_ECTSI) HSP 1 Score: 207 bits (528), Expect = 4.010e-60 Identity = 126/311 (40.51%), Postives = 181/311 (58.20%), Query Frame = 1 Query: 19 GRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVT-AACEVSFL---RAVVIDSPENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCMLHDGSRYLITHPRNNKKKHSQE-TPRAANADDHSSFDSSE--PTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRK------DIPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDCVLWSSA 912 G+V FK VRGW+P +LS+ +G+ L+ C KRG A+C+ L VV S ++ K N RF+FRV +G RGK + + + + + + P +++ + + P A N D SS SS+ P + + G++++P D PL GQFLST P+ DS V IT+IGD++ R G +P F + SP+WA+R GSTG KA+GG+ C +ESW R DIPV+L VKNGRWRVGRG LCT+G+SPKP GSWR + P D +G+A++ A L + ++V + +LWSSA Sbjct: 146 GKVLFKT-MVRGWQPGDLSLVAGSALRLCHTKRGFANHASCKEQPLDRSSEVVRLSEQDVGKAGNGRFMFRVVSGDPRGKTNTKWTLDAESQSELDAWVSILTEAIIAQGPAGDEETNRLDGAPLAQNLGD-SSVTSSKLGPDTPEVSPAFRGQSMAPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGDIPAFSGDKSPLWAYRATGSTGDKADGGLGCVLESWWRRMVKGTYDDIPVHLYVKNGRWRVGRGRLCTMGQSPKPHGSWRANLPWDAKGRAIKTAGLELRDGALVLVTPQGEILWSSA 454
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LK83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK83_ECTSI) HSP 1 Score: 194 bits (492), Expect = 6.960e-57 Identity = 108/257 (42.02%), Postives = 156/257 (60.70%), Query Frame = 1 Query: 178 ENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCM-LHDGSRYLITHPRNNKKKHSQETPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDC-VLWSSAPA 918 ++GR ++ RFVFRV+TG RG + ++ M + +G + T + S +TPRA N D F P + G ++S +D PL+PGQFLST PV +SA + +T++GD++ R+G +P +PT+ P+WAHRV GS GG AN + CA+E W R +PV+L VKNGRWRVGRGW+CTLGRSP+ AG WR+H P D G+A++ ASL++ D + V+ +ED +LWSS+P+ Sbjct: 27 KHGRPRKDGRFVFRVSTGTPRGLKNKAWELDAGSSAALDMWMSVLEG---VTTRDTQKEALFSGDTPRAGNPGDSFKFSMELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTDHKPLWAHRVTGSVGGTANWRLGCALEVWWDRATNGGEDMGVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQL-CDGSAVMATEDGHILWSSSPS 279
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 206 bits (525), Expect = 2.060e-56 Identity = 120/293 (40.96%), Postives = 173/293 (59.04%), Query Frame = 1 Query: 10 LRFGRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVTAACEVSFLRA---VVIDSPENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCM-LHDGSRYLITHPRNNKKKHSQETPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLR 852 +R G V K V WRPR+L++ + LK C + RG +C+ L + VV ++GR ++ RFVFRV+TGV RG R + + + M + +G + T + +TPRA + D F + P + G ++S +D PL+PGQFLST PV +SA + +T++GD++ R+G +P +PT D+P+WAHRV GS G A+GG+ CA+E+W R IPV+L VKNGRWRVGRGW+CTLGRSP+ AG WR+H P D G+A++ ASL+ Sbjct: 1601 IRQGTVKVKTF-VSWWRPRQLTLVDASTLKLCKMARGGGVKSCQDMPLDSSTEVVRVEGKHGRPRKDGRFVFRVSTGVPRGLTNKRWELDAGSSADLDKRMSVLEG---VTTRDFEKEADFFWDTPRAGDLGDSFKFSTELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVNSANLEVTEVGDLILRQGDIPAYPTNDTPLWAHRVTGSVGYTASGGLGCALEAWWERATNGGEDMGIPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQ 1889
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: A0A6H5JC81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC81_9PHAE) HSP 1 Score: 187 bits (474), Expect = 3.460e-54 Identity = 110/312 (35.26%), Postives = 157/312 (50.32%), Query Frame = 1 Query: 1 VKQLRFGRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVTAACEVSFLRAVVIDSPENGRKGRNARFVFRVTTGVQRGKGRARCPPNGYVHTSIHRCMLHDGSRYLITHPRNNKKKHSQETPRAANADDHSSFDSS-EPTRSTLEQEWSGRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDCVLWSSA 912 V Q+ G VN K VR WR R+L++ + LK C + R +C+ F +A + + +G + T + +TPRA N D F P + G ++S +D PL+PGQFLST PV DSA + +T++GD++ R+G +P +PT P+WAHR GS GG A GG+ CAVE+W R +PV+L VKNGRWRVGRGW+CTLGRSP+ AG WR+H P D G+A++ ASL++ ++ + +LWSS+ Sbjct: 8 VVQIHQGTVNAKTF-VRWWRARQLTLVDASTLKLCKISRRGQEKSCQWDF----------------DAGSSLALDAWISLLEG-------------------------VTTLDYQKEADFWGDTPRAGNPGDSFKFSIELGPFTFAPTPAFRGDSISVDDYPLIPGQFLSTAPVVDSANLEVTEVGDVILRQGDIPAYPTNPKPLWAHRATGSVGGTAKGGLGCAVEAWWERATNGGQDMRVPVHLAVKNGRWRVGRGWMCTLGRSPRVAGGWRVHLPWDSHGKALKAASLQLRDGSAVMATEDGHILWSSS 277
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: A0A6H5KXU4_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU4_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.550e-47 Identity = 81/157 (51.59%), Postives = 103/157 (65.61%), Query Frame = 1 Query: 454 GRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRK----DIPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDCVLWSSA 912 G +SP D PL GQFLST P+ DS V IT+IGD++ R GG P F + P+WA+R GSTG KA+GG+ C ESW R D V+L VKNGRWRVGRG LCT+G+SP+P GSWR + P D +GQA++ A L + ++V +LWSSA Sbjct: 70 GHVISPGDYPLQTGQFLSTAPLVDSTNVEITEIGDVILRAGGFPAFSGDKPPLWAYRATGSTGDKADGGLGCVFESWWRRMVKGTDEDVHLYVKNGRWRVGRGRLCTMGQSPRPHGSWRANLPWDAQGQAIKTAGLELRDRALVLVTPHGEILWSSA 226
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Match: D8LKF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF0_ECTSI) HSP 1 Score: 152 bits (383), Expect = 2.950e-41 Identity = 74/163 (45.40%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 454 GRALSPEDDPLLPGQFLSTLPVGDSAKVSITDIGDIVFRKGGLPGFPTEDSPIWAHRVVGSTGGKANGGVLCAVESWLTRKD-------IPVNLTVKNGRWRVGRGWLCTLGRSPKPAGSWRLHKPGDPRGQAVRNASLRIEADETLVVGSEDC-VLWSSAPA 918 G ++S +D PL+PGQFLS PV +SA + +T++ D++ R+G +P +PT + + R G NGG+ CAVE+W R +PV+L KNGRWRVGRGW+CTLGRSP+ AG W++H P D G+A++ ASL++ D ++V+ +ED +LWSS+P+ Sbjct: 66 GNSISVDDYPLIPGQFLSAAPVVNSANLEVTEVRDLILRQGDIPAYPTGHT-LGTPRYGVGRGYSTNGGLGCAVEAWWERATNGGEDMGVPVHLAEKNGRWRVGRGWMCTLGRSPRVAGGWKVHLPWDSHGKALKAASLQL-GDGSVVMSTEDGHILWSSSPS 226 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig528.13415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig528.13415.1 >prot_L-elsbetiae_contig528.13415.1 ID=prot_L-elsbetiae_contig528.13415.1|Name=mRNA_L-elsbetiae_contig528.13415.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=306bp VKQLRFGRVNFKAGPVRGWRPRELSVTSGNVLKQCTVKRGKVTAACEVSFback to top mRNA from alignment at L-elsbetiae_contig528:7513..9734- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig528.13415.1 ID=mRNA_L-elsbetiae_contig528.13415.1|Name=mRNA_L-elsbetiae_contig528.13415.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2222bp|location=Sequence derived from alignment at L-elsbetiae_contig528:7513..9734- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig528:7513..9734- >mRNA_L-elsbetiae_contig528.13415.1 ID=mRNA_L-elsbetiae_contig528.13415.1|Name=mRNA_L-elsbetiae_contig528.13415.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1836bp|location=Sequence derived from alignment at L-elsbetiae_contig528:7513..9734- (Laminarionema elsbetiae ELsaHSoW15)back to top |