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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 754 |
| Cds size | 486 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816544.8283436-CDS-L-elsbetiae_contig5277:3593..3881 | 1622816544.8283436-CDS-L-elsbetiae_contig5277:3593..3881 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5277 3594..3881 - |
| 1691683636.6369238-CDS-L-elsbetiae_contig5277:3593..3881 | 1691683636.6369238-CDS-L-elsbetiae_contig5277:3593..3881 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5277 3594..3881 - |
| 1622816544.8418217-CDS-L-elsbetiae_contig5277:6167..6297 | 1622816544.8418217-CDS-L-elsbetiae_contig5277:6167..6297 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5277 6168..6297 - |
| 1691683636.647374-CDS-L-elsbetiae_contig5277:6167..6297 | 1691683636.647374-CDS-L-elsbetiae_contig5277:6167..6297 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5277 6168..6297 - |
| 1622816544.853823-CDS-L-elsbetiae_contig5277:8103..8171 | 1622816544.853823-CDS-L-elsbetiae_contig5277:8103..8171 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5277 8104..8171 - |
| 1691683636.6570463-CDS-L-elsbetiae_contig5277:8103..8171 | 1691683636.6570463-CDS-L-elsbetiae_contig5277:8103..8171 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig5277 8104..8171 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816544.8646665-UTR-L-elsbetiae_contig5277:8171..8251 | 1622816544.8646665-UTR-L-elsbetiae_contig5277:8171..8251 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5277 8172..8251 - |
| 1691683636.6667955-UTR-L-elsbetiae_contig5277:8171..8251 | 1691683636.6667955-UTR-L-elsbetiae_contig5277:8171..8251 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5277 8172..8251 - |
| 1622816544.876014-UTR-L-elsbetiae_contig5277:9957..10144 | 1622816544.876014-UTR-L-elsbetiae_contig5277:9957..10144 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5277 9958..10144 - |
| 1691683636.6763399-UTR-L-elsbetiae_contig5277:9957..10144 | 1691683636.6763399-UTR-L-elsbetiae_contig5277:9957..10144 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig5277 9958..10144 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5277.13411.1 >prot_L-elsbetiae_contig5277.13411.1 ID=prot_L-elsbetiae_contig5277.13411.1|Name=mRNA_L-elsbetiae_contig5277.13411.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
MGELIGEVADVRIRYKSSWVVVSLEDGSGKMMKLCELEPFLTSYRLLATK
FMEAKTSAISSGMLAQVIAAEGISKQQIDKHAVSFGPLQVTPVTLNTGPV
ANVSERTPTHNIYCLGGENSRLFFGLRNFMAAQRGETSKVKAGAARAKKR
EVGAAKSKTKGG back to topmRNA from alignment at L-elsbetiae_contig5277:3594..10144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig5277.13411.1 ID=mRNA_L-elsbetiae_contig5277.13411.1|Name=mRNA_L-elsbetiae_contig5277.13411.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6551bp|location=Sequence derived from alignment at L-elsbetiae_contig5277:3594..10144- (Laminarionema elsbetiae ELsaHSoW15)
TACTCGGCCAGACGATGCGCGATAGGCTTAGCTACATACAGCACCAGCGG
CTCGCGCATGTGACTCCAAGCGCGTGCACAAGTATATCCTGATCGGACCT
TAATTTTTGACGGTCCACAGGCGCTTTCTCCGGCACCCGGCCTCTGCGAG
AGGGGATATTGGGGGTGCACAACCTTGAGGCCCAGATGCGTTCACCGGCG
AAAAATGGCGCCCGTTGCTAACGTGTGCGGCGAGAAAACGCGAAAACGCG
TTTTAGAAAAAAAATAGCCTCAAAACGCGGCGGAAAATAGCCTAAAAATG
CGGCCGTTTTTTTTTTTAAAAGGGCCTAAAAATGCGGCGTGTTTACGCTT
TTAGGATTGAGCTGTTTGGTTCGAGAAGGACTAAAACCCATAAAATGGAT
TTTAGAATATGGGGTGTTTTATTTTATATTTAGTTAATTATTTATTGGGT
GGGGCAGGGAAATATCACATATTGATGTTTTGGCGAAATTAGCGAAATGC
ATCAAAAAGGCGGTGGGATCTGGTACCTACTGCTGTCGATTGATTTGTGA
CAGACAAGCTGCATACACGTGCGCCATAAAAACTGAACGTAGCGAACTCT
CAAAGGCCTCCCGGCAAACCTATAGGTACTCTGCTGGCGCGAAAGTGAGC
TTGAAGAGATTCGCCTCTGAACCTGATGCAATACCTTTTTGGCGCAAGCC
TCCTTCGGCCCTACAAAAAGTAGAGCGGGTGCGGATACTGTGACCGCCGG
TGTGCAGCAATAGCTCACCAGGCGCGCGAGAAAAAATGTTTTGGGCGTAA
AACAAACGGAAACATACGTCACAGCTCTTCCAACGGCTCTTTGAGAGCAC
ACAAGGCTGCAAATGTAACCAGCTCTTATCCGCTAGGCCCTGTATCCATG
CGTAGTCTTCTTCGCCTTCACCTCACTTGTTACTTTTTTTCGGATGCGCG
TGTGATGGCAGTGGCTTTACTCAATCGACAGAGAGACCCATCGGCATGCG
CGCGCACCAATGTTGAAAAAGACAGTGCTGTCAGTGCCGGCGGTTTGGAG
GAATGCCGGCCGTGGAAATGCCGTTCAGAGGCAATTCCAGTTACGCGGAG
CATCGGGGGCCCCGAAACACTGGGGGCCCCGTAGAAGCACCGGGGGGGCC
GTAGAAAACACTACCCCCTATTGTTCGCCGGGAAAACGCAAATGAAGCCC
CTCAACCCGTGAAAATTGAACGCTGTATCGTCGCCTGTGTGTGCCGCACA
GCCGTTTCAAGATTTCGTGCGTAAGGCTGGTGTTTGTTTGTTGTTCTTGT
AGTTATGATTACTGGATCGCTGGAGTTACCTCTTGACCAGGTTTTAATGT
TTTCTGTTTGTATTTCAAAATTCGAAACATAGTGCTGATCATGAGCTGGG
ACTGCTGTGTGTGTGTGTGTGCTTGTGCTGTGTCGCCTGTGCTGCTGTGC
CGTTTGTTTTACTATAAAGTGACGAGAAGTCCCGACAACTAGCAGCGTGC
GATTTGTAGTGTAGCACGATGCACCGGGCACAGGTGTGCGTCAAGATGGG
ACAGCGACGGTTCGTTTTTGTACATGTGTACGTATGTTTCTCCAATTCTA
GACGGCGAGACAACGGATAGTGACGTGTGACCCCGGTTGGGTCGTCTAGC
TAGTCGTAGTGGAGGAAGGGGGCCAGTGCGGCAGACGACGAATAAGCCAA
TGATGGGAGGAAAAGACAACAACAAAAATGCTCGATGCGATTCATCCATT
GACACACAAGCATCCCGAGTATTGTTTTTTTTTCGAGACACGTATTCATC
TTGCCCAGCCAAAACAAAATTCGATATACATTTCGTCCCTATGCATGGCC
CCATGATGCTGTTCCTCTGCCGATGATGTTTTTGCTCCACTAGCTCGAAG
GCCCGCCCCGCGGCGGCAGGGAAGAAGCCCCCCCCCCCTGCTCGGCACAG
AACACATCGGGCGCTTTGTGCGGATGGGTGAGCTCATCGGGGAGGTCGCC
GACGTCCGCATCCGCTACAAATCGTCGTGGGTCGTAGTGAGGTGAGCGGC
GAGGTAAAACATATTCACGGATTGGGATCCCAACCAAAAATAATTAGTCG
CCTGAAGATTGGTCCGTGCACAACAGATTATCCAAACAAATCTAGCCACG
CATGACAATTTTTCTCTGCACACAGACAGGTAGTTGTCCGGAAATCTGAC
AGTATTTACCAGCAAAAGCCTTATCTCCAGGCGCGCATCTCGTGACGGAA
AGTTTTTTTATTTTATGCCTTGGCCTTTTATCAGAGAAAAACTTGTTTTG
TTTTATCTAAGAGGTAGTGTTTGGCGATTACAAGTATCTCAACGGATTTG
GACAGATCTCGGAATTTGCTAGATGTGTTCGCTTGTTTTTTAAAAATAAT
CACAACTGGCGAGGTGATCGGGGAATTTCGGATTTAGAGGGTCAACTTGT
TTTGTTTTATATTTATGGGATACTAGAGTAATGGAACGGCCCCCCCGTCG
TGACGGGGCGGGGGGACCAGAATGTGTTTGAGGTGAGAACAGATGTGGCA
TCGGGAAAGAAAGGTGGCTGAAGCGTTCATGGGCTTCCGGATGGAGTGTT
GGCGACGATTTTGATTTGGCGTTTGAGCATGAAGGCCATCTGTACACGGA
ATCGGTGGTGAAGTCAGAGAGTGAGCAACTCCCGTCTTTGTGCTTGCTTG
TAATCGTGCCTGAAAAGTGATGACCAGGCGAACAGGCTTCTGTGACCTAC
GCAGATGAAAATTGAAAGATGTTTCCAATTTCCATGGGTACGAAAGCTAC
CGCAATTTATTCCTTCTGAGAAGATATAGTAAGCCGAAAAGGTGTGTGAA
GTATCCGCGAGAATATATTCAACCTATATCGACAGATGGTGACGACCACA
TGCAGAAATCAGAGAGAAAACTCGGAAGAAATCTATTATTTTTAATTGGG
CAGCAGTCGGAAAGCATGCGAACTACAATACAGCGTCTACGTACGTGCAT
GGGGGAAACTTTAGAAATATGCCAAAAAGCATGAGGAAGCAAAAGCAATA
CAAAACCCCTATGGTAAGAAGGATGTACATGGGAAACGAAACACTGCAAG
AAGAGCAGTTTGGTAGACCAATCTACCATAAACACTGCAGGGCCTGATCA
AACATTGTTTTTTTGGAGGGGGGGGTGCGGCCGAACCCTGTCGGCACAAT
GAGCGAGTACGACCTGAGTTCTGAACGAATCGCTCCTACCAAGGGCTCCA
AGCAACCCTTGGCTGACGGTGCTGCTGTTTTGCCCACCAGTTAAGACACA
ATCTTGAATCATGAGCACCGGTTTCTCTCAGCGGTTGTAAGATTGCTTGT
AGTGTGCGTTCACAGCCTTTATGCTGGCCGTGCTTGCTGGTTATCGTCGT
AGTGCATCCCTCGTCGGGGGTAGTGGCGCAGGCTCCCGGGAGTGCGACGC
ATAGGCTTTTACAGGCGCCACACTTTGTAACACCGAGGTTTTCAAAGAGT
GCATGCGTATACATAAGAGTGCAAAGGCAAAAAACAATAGGACTTTCGTT
GCTTTTTCGGCGATACGTATTTCGACTTTTGTGATGCTTGCATCTCGACA
GCCGTTGCATTTATACAACGTGCGTTTCGGCTCATGCCTACATAGGACTG
CGGCTTTGGACCATGAGTATCCCTGACTCTCAAGGGGCGGTAACCGTCTT
TTGTTCATGCGTAGGGGGGGAGCTTGTGAGTCGGTCACATTTGTCTCATG
CCTTGTCGCGAATCCGGAGGGTTCTCCGCTCTTTCCAAGTTCCCCGAATG
TGAACCTGTCCGCTCCACCTTGCGCCGGCTTTCCTTCTGCCCTTCAGCCT
GGAAGATGGCTCCGGGAAGATGATGAAGCTATGTGAGCTCGAGCCGTTCT
TGACGAGCTACCGCTTGCTCGCGACCAAGTTCATGGAGGCCAAGACCAGC
GCCATCAGCTCGGGGATGCTTGCTCAGGTGACTTTCCCCCCCAAGGTTGT
GTTTAATAGGGTTTTTATTTTCGAGTAGAATATTGTATCGAGAACAGCAC
TTAATCTAAATCTAGCGAGAGTGGAGTACCGTAATCATGGGAGTGATGGC
ACCGGGGTGCGATCATTTTTGAAATAATGCATCTGTTTGATTTCTATCGC
ACCCCGGTGCCATGACTCCGATGGGTGCGATAGCTCCGATGGGGGTGCGA
TAATCATATTAAATCATAGCGTTCTAGCTTTCTCAACGCACCCCGCAGTG
CGATAGCTCCGATGGGTGCGATGCTGAATGATATTACAGGGGCTGATGGC
GTTAGAATACTGTGAATGCGGACACCCCCTGTGCGATAACTCCGATGGGT
GCGATATTGAACAATACGGTGTGGATTCCTGGGTATCGTATATACAGGAG
TTCTGCGGTACAGGATAAGCAACACAAACACTATTGCGTCATCGTCACTA
CCTTCTACCCCTTGATGCCACTATGTCACCCACTTACCTACGATGTTCAG
ATAATCCACAGCAGATGTGCTACTACCACGGCCTTGCCATGTCTGCGGAT
GGCCCGTGTTCAACCAGCTTTTGAACGTATGTAGTTTTTGGATTTAAAAA
AAAATGTTCCTGTTTTTGGAGACCGCGCAGCTGCTGAATTACATATATAC
AGCAGTCAGTGTGTTATCTCGCCTACGTAACGTACACAAGGCGACATCTT
ACCTTCACCCCTGCTTGGTAATCTCCAGTTCCAAATTACTCAGCTAAACC
TCTAGTTTATGCTCATGCGCCGTGTACGTACTGCAATAACTCTCTACATT
TTTATGTCATACGGAAGATATCATACCCACATTTTTCCCGACACACGCTA
AATACCATCCCTCCCAATCCTGGCTATTGCCTTATCACCTACCACTAATA
TTGTATGTTCTCCTCAAAAGCAGTAACCCACATATATTAAACCAGCATTT
TGATTTAGTTCCACAATGCGATGTGTTCCTATTTTGAGTAGATGACAGCA
TTACGGCATCATGGCGGGCATCTACCCGCCGGAATACTTGTTGGCCGGCC
TCGCAAATCTTTGCAGGGGAGATGTTGAACTCTTCTGATATTTTAGGTTT
GTTTTCCTGCTCGCTTCGCCAAATAGTACGTCACTGTATGGAATACCGTT
TGAACCCCATATCGAGTCCTTGCTCTAGTGTGGGGTAAGTTCCACCTTTG
ATTCATTGTTTATTTTTAAACACACATACACACACACCTTTCACACAAAC
CGATGCGGTCCCCCGCTGAAAGGTGTTTTAGGTAGTTTGTTTTTCAGCTT
GTTGGTTTGTTTCTCTGTGCTGTTTGAATATTCTTCAGCGAGTACGGTAG
GTAGTGTCTTCTGGGTTCGTTACCGTGGTTGCACGGGTGGGTGTGGAGTG
CTTGCTTGAGCTACGGTACTTTGTAACGGCATCAAATTAATCGAATAAAA
ACTCTACTCATTTCTACACATACATGTGCCGGCGACAGCACTCATAAAGG
AGTGCCCCCCGATGATACCGCATGTCGCCTGTTAATATGGCTTTGCAAGT
ACCTCTTCAACCCGTTACAACTGAAAACGTGGCCTGCAGCCACTCGTATG
CAACGTACACCCGAAGTTGAGATTTTCATAATCGGAGTTATCACACCCCG
GTGCGATAACTCCGATGGGGGTGCGAAATGGAATTGGATACTTTGTATGT
TTCATTTTTATCGCACCCCAGTGCCCATTACTCTGATGGGTGCGATAACT
CCGATGGGTGCCATCACTCCCATCATTACGGCATCAGGCCAAGTAGAGTA
CCGACTAGAAACTGTGTTCGGCCCGAGTGTAGCACCGAGAACTTTGCTCA
GCCTACCCGAGGGTAGAGCACTCAAGGTAATCGAGAAAAAAATAAATATT
TCAACAAGCTGGGCTCACCGAGACACCCGCAAAATGATTGACAGCGATTT
CCTACGTGGTTTTTTCGAGTAGAGGCCTTATTTTTGACACGTGGCTGATA
TGGCCATAAAAAGGGATCCGTGGCTGCCCCCTTTTTTCGCGAGTTAGCCC
AAGGGCAGAATTGCTCAATCATCCAGAAGGTTGTCTTCCCTTGGCCCACC
TCTAGTCCCGACGCCATATCGAGTCGGAGAGCGGAATAGATGCAGCTGCT
GCTAGGCAAGAGTTACAGAGGGCAAGCTTTTCGATACTCAACACCCCGCT
GGGTTCCTTCCTCCCCTCTTGTTGGTTCTGTTCTTTTTGTCTGTATTGCT
TCGGTTATTCTAGGTGATCGCCGCCGAAGGCATCTCGAAACAACAGATCG
ACAAGCACGCGGTGAGCTTCGGACCGCTTCAGGTGACGCCCGTGACCTTG
AACACCGGCCCGGTGGCGAATGTGTCGGAGCGGACGCCCACCCACAACAT
CTACTGCCTGGGCGGCGAGAACTCGAGGCTGTTCTTCGGCCTGAGAAACT
TCATGGCAGCACAGCGCGGCGAGACCAGCAAGGTGAAGGCCGGTGCGGCG
CGCGCCAAAAAGCGGGAGGTGGGCGCCGCTAAGAGCAAGACAAAGGGCGG
G back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig5277:3594..10144- >mRNA_L-elsbetiae_contig5277.13411.1 ID=mRNA_L-elsbetiae_contig5277.13411.1|Name=mRNA_L-elsbetiae_contig5277.13411.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig5277:3594..10144- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTGAGCTCATCGGGGAGGTCGCCGACGTCCGCATCCGCTACAAATC
GTCGTGGGTCGTAGTGAGATGGGTGAGCTCATCGGGGAGGTCGCCGACGT
CCGCATCCGCTACAAATCGTCGTGGGTCGTAGTGAGCCTGGAAGATGGCT
CCGGGAAGATGATGAAGCTATGTGAGCTCGAGCCGTTCTTGACGAGCTAC
CGCTTGCTCGCGACCAAGTTCATGGAGGCCAAGACCAGCGCCATCAGCTC
GGGGATGCTTGCTCAGCCTGGAAGATGGCTCCGGGAAGATGATGAAGCTA
TGTGAGCTCGAGCCGTTCTTGACGAGCTACCGCTTGCTCGCGACCAAGTT
CATGGAGGCCAAGACCAGCGCCATCAGCTCGGGGATGCTTGCTCAGGTGA
TCGCCGCCGAAGGCATCTCGAAACAACAGATCGACAAGCACGCGGTGAGC
TTCGGACCGCTTCAGGTGACGCCCGTGACCTTGAACACCGGCCCGGTGGC
GAATGTGTCGGAGCGGACGCCCACCCACAACATCTACTGCCTGGGCGGCG
AGAACTCGAGGCTGTTCTTCGGCCTGAGAAACTTCATGGCAGCACAGCGC
GGCGAGACCAGCAAGGTGAAGGCCGGTGCGGCGCGCGCCAAAAAGCGGGA
GGTGGGCGCCGCTAAGAGCAAGACAAAGGGCGGGGTGATCGCCGCCGAAG
GCATCTCGAAACAACAGATCGACAAGCACGCGGTGAGCTTCGGACCGCTT
CAGGTGACGCCCGTGACCTTGAACACCGGCCCGGTGGCGAATGTGTCGGA
GCGGACGCCCACCCACAACATCTACTGCCTGGGCGGCGAGAACTCGAGGC
TGTTCTTCGGCCTGAGAAACTTCATGGCAGCACAGCGCGGCGAGACCAGC
AAGGTGAAGGCCGGTGCGGCGCGCGCCAAAAAGCGGGAGGTGGGCGCCGC
TAAGAGCAAGACAAAGGGCGGG back to top
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