mRNA_L-elsbetiae_contig5240.13360.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5240.13360.1
Unique NamemRNA_L-elsbetiae_contig5240.13360.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A6H5J7N3_9PHAE (E1 ubiquitin-activating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J7N3_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 5.960e-125
Identity = 203/232 (87.50%), Postives = 215/232 (92.67%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            D++ YA+ L +++VP FKPVDGVKIATTEAEAK        XXXXX QLEDVDAQCERMLGELPK  DMKDFRLEVVEFDKD+D+HMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLV MEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKT T+IKGSEW+WSAWDSLELEGADITLQQLFDIMK+KYGLEVTMLSHGVSILYSFFA+KKK
Sbjct:  821 DDAVYASTLSQMEVPVFKPVDGVKIATTEAEAK---EQATGXXXXXAQLEDVDAQCERMLGELPKPADMKDFRLEVVEFDKDLDEHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVSMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTATMIKGSEWKWSAWDSLELEGADITLQQLFDIMKEKYGLEVTMLSHGVSILYSFFASKKK 1049          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A836CIM1_9STRA (Ubiquitin-activating enzyme E1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIM1_9STRA)

HSP 1 Score: 296 bits (758), Expect = 2.160e-90
Identity = 163/235 (69.36%), Postives = 190/235 (80.85%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQ---LEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            D++A   AL  + VP+F P +GVKIA TEAEAK XXXXXXXXXXXXX    + D DAQC  ++  LP+   +  FRL  VEFDKDVD HM  VTAASNLRAR YKIPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+ K+ QEKPLE+YKNWFLNLALPQF+CSEP+PPA T   +KG EWRWSAWD ++++  DITL  LF +++D+YGLEVTMLSHGVSIL+SFFA+KKK
Sbjct:  740 DDAAVLAALSSVIVPDFTPAEGVKIAVTEAEAKEXXXXXXXXXXXXXXXXFMMDTDAQCAALVDALPEPASLGAFRLAAVEFDKDVDAHMVLVTAASNLRARCYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELIKVAQEKPLEAYKNWFLNLALPQFACSEPIPPATTAVKLKGREWRWSAWDCIDVDRGDITLAALFALLRDEYGLEVTMLSHGVSILFSFFASKKK 974          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S2G964_9STRA (E1 ubiquitin-activating enzyme n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G964_9STRA)

HSP 1 Score: 265 bits (677), Expect = 1.000e-78
Identity = 153/239 (64.02%), Postives = 183/239 (76.57%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXX---QLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGS----EWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            D++ +   L  + VP F P DGVKI T E     XXXXXXXXXXXXX   +L DVDAQC+ ++ +LP    +  F+L  VEFDKD+D+HMEFVTAASNLRAR YKIPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+YK++Q KP+E+YKN F+NLA+P F+ SEP PPA T   I+      EW+WSAWD L+++  DITL+QL   M+D YGLE+TMLSHGVSILYSFF NKKK
Sbjct:  759 DDAYFLAFLPNVVVPGFTPKDGVKIKTPEEXXXXXXXXXXXXXXXXXXDEELMDVDAQCDEIIAQLPTPASLAGFQLNPVEFDKDIDEHMEFVTAASNLRARNYKIPEADMHRSRLIAGKIIPAIATTTALVTGLVCLELYKVIQSKPVEAYKNGFVNLAIPVFAFSEPQPPATTLAKIQKDGAPFEWKWSAWDRLDIKLGDITLKQLIAHMEDAYGLELTMLSHGVSILYSFFQNKKK 997          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S2B3Z9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B3Z9_9STRA)

HSP 1 Score: 246 bits (627), Expect = 7.290e-75
Identity = 127/242 (52.48%), Postives = 170/242 (70.25%), Query Frame = 1
Query:    1 MSSIWQDESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTII----KGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            +S  W+D + +   +  + VP F P DG+KI+  E E +                 D +A C+ +L  +P  + +  F +  ++FDKDVD+HM FVTA SNLRAR Y+IPEADMHRSR IAGKIIPAIATTTALVTGLVC+E+YK++Q+KPLE++KN F+NLA+P F+ SEP+PPAKT   I    +  EW +SAWDS ++   ++TL++L D ++D YGLEVTMLSHGVSIL+SFF N+KK
Sbjct:  277 ISGTWED-TYFVRVVSNVQVPHFVPKDGMKISANEKEEEESKNQSVDTM-------DTEAMCQHILSRIPPPKALAGFHVTPIDFDKDVDNHMLFVTACSNLRARNYQIPEADMHRSRLIAGKIIPAIATTTALVTGLVCIELYKVVQKKPLEAFKNSFVNLAIPLFALSEPIPPAKTLAKITKEGRPFEWHFSAWDSFDVRLGNLTLKELVDHLQDDYGLEVTMLSHGVSILWSFFLNQKK 510          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S4D9B8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9B8_HETAK)

HSP 1 Score: 246 bits (629), Expect = 1.010e-74
Identity = 137/234 (58.55%), Postives = 168/234 (71.79%), Query Frame = 1
Query:   16 QDESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQE-KPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            +D + +   L  + VPEF P  GVKIA  E E   XXXXXXX         D++ Q ++++ ELP   ++  FRL  V+FDKD+DDHM  + A SNLRAR Y IPEAD+HRSR IAGKIIPAI+TTTALV GLVC+E+YK+ Q  KPL +YKN F NLALP F+ SEP PPAKTT  ++G EW WSAWD +++   D+TL+Q  D  +D+ GLEVTMLSHGVSILYSFFANKKK
Sbjct:  325 RDAAYFQGVLPNVMVPEFVPRRGVKIAADEKEXXXXXXXXXXSISAT----DLEGQAKQIIEELPSPSELAGFRLVPVDFDKDLDDHMTLIAATSNLRARNYAIPEADLHRSRLIAGKIIPAISTTTALVAGLVCLELYKVFQGGKPLAAYKNGFANLALPLFAFSEPQPPAKTTGRLRGREWEWSAWDRIDVRLGDVTLKQFLDHFQDELGLEVTMLSHGVSILYSFFANKKK 554          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7R9WKT0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKT0_9STRA)

HSP 1 Score: 244 bits (623), Expect = 9.620e-74
Identity = 133/236 (56.36%), Postives = 173/236 (73.31%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIM----QEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            DE  + +AL  + VP+F P +GVKIA  +AEAK      XXXXXXXX +EDVDA+C+R+L  LPK  ++  F+L  V+FDKDVD+HM FVTA SNLRA  Y IP  D+HRSR IAG+IIPAIATTTALV GLVC+E+YKI+    ++  +++ KN F+NLA+P  + SEP  P+ T  ++KG EW W+AWDS+++   DITL++     + +Y LEVTMLS GVSIL+SFFANKKK
Sbjct:  333 DEEYFRSALKNVIVPDFVPREGVKIAANDAEAK---ENEXXXXXXXXDMEDVDAECDRILASLPKPSELAGFKLNPVDFDKDVDEHMRFVTACSNLRALNYSIPTEDVHRSRAIAGRIIPAIATTTALVAGLVCLELYKIVGTAGRDLKIDALKNGFVNLAVPFMTLSEPTAPSTTKAVLKGKEWNWTAWDSIDMNMGDITLREFVTYFEKEYNLEVTMLSQGVSILFSFFANKKK 565          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S2RXQ6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXQ6_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.330e-73
Identity = 126/236 (53.39%), Postives = 165/236 (69.92%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIM----QEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            DE  +   L  + VPEF P +GVKIA  E+EAK                +++D +C+ ++ +LPK  ++  F++  +EFDKDVD+HM FVTA SNLRA  Y IP  D HRSR IAG+IIPAIATTTALVTGLVC+++YK++    +E  L+ +KN F+NLA+P  + SEP PP KT  I+KG EW W+AWDSL+LE  DITL++L D    +Y L+++MLSHGVSILYSFFANKKK
Sbjct:  523 DEEYFRQVLDNVIVPEFTPANGVKIAANESEAKQQNDEAPG--------DNIDDECDEIIAQLPKASELAGFKVNPIEFDKDVDEHMLFVTACSNLRALNYWIPTEDTHRSRAIAGRIIPAIATTTALVTGLVCLDLYKVIGSARKELTLDMFKNAFINLAIPFMTLSEPTPPEKTKCILKGKEWNWTAWDSLDLELGDITLKELMDHFATEYNLDISMLSHGVSILYSFFANKKK 750          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: I2CSG2_NANGC (E1 ubiquitin-activating enzyme n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSG2_NANGC)

HSP 1 Score: 249 bits (637), Expect = 4.180e-73
Identity = 123/228 (53.95%), Postives = 165/228 (72.37%), Query Frame = 1
Query:   28 AYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKK 711
            A   AL  + VP+F P DGVKIA T+ EAK                 D++A+CE ++  LP    +  F L+ ++FDKDVD HM  VTA SNLRA  YKIPEADMH++RQIAGKIIPAIATTTALVTGLVC+E+YK++ +KP+E +K+ F+NLALP F+ SEP PPA  T ++KG EW+WSAWD +++EG D+TL++    M++++GLEV+MLSHGVS+L+S   ++K
Sbjct:  766 AVKAALENVMVPDFSPQDGVKIAVTDTEAKQQAEQGGSDGGAVTSSLDLEARCEAIIASLPPPSALTGFTLQPIDFDKDVDAHMAVVTATSNLRAANYKIPEADMHKTRQIAGKIIPAIATTTALVTGLVCLELYKLVLKKPIEDFKSAFVNLALPLFTFSEPQPPASQTAVVKGEEWKWSAWDRIDIEG-DLTLREFLKYMEEQFGLEVSMLSHGVSLLHSSLTSRK 992          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A7S1BIN6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIN6_9STRA)

HSP 1 Score: 240 bits (612), Expect = 6.610e-73
Identity = 121/236 (51.27%), Postives = 163/236 (69.07%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIM----QEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            +E  +   L +I +P+F P  GVKI T E E +                 DVD++C+++  ELP    +  FRLE++EFDKD+D+HM FVTA SNLRA  Y+IP  D H+SR IAG+IIPAIATTTALVTGL+C+E+YK++    +E P+E+YKN FLNLA+P  + +EP  PAKT  ++KG EW WSAWDS+ +   DITL++  +  + +Y LE+ MLS+GVS+LYSFFANKKK
Sbjct:  253 EEEYFQQFLPEIIIPDFTPKQGVKIQTKEDEKEEEAPPADM---------DVDSECDKIFAELPAPSSLAGFRLELIEFDKDIDEHMLFVTACSNLRAINYQIPTEDTHKSRAIAGRIIPAIATTTALVTGLICLEMYKVVGSANKELPIEAYKNSFLNLAIPFMTSTEPQGPAKTKAMLKGKEWEWSAWDSIHMNIGDITLKEFMEYFEKEYNLEINMLSYGVSLLYSFFANKKK 479          
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Match: A0A6A3N8N5_9STRA (E1 ubiquitin-activating enzyme n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3N8N5_9STRA)

HSP 1 Score: 248 bits (633), Expect = 2.230e-72
Identity = 124/232 (53.45%), Postives = 161/232 (69.40%), Query Frame = 1
Query:   19 DESAYATALGKIDVPEFKPVDGVKIATTEAEAKGXXXXXXXXXXXXXQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAASNLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEKPLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGADITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK 714
            D   +   L +I VPEF P  GVKIA ++AE K               LED DAQCE +L ELPK  D+  +R+E +EFDKD D HME + + SNLRAR YKIPE DMH+SR IAGKIIPAIATTTALVTGLVC E  K+ Q+KPL+ YKN F+NLALP F+ +EP+ P  T T++KG E++W+AWD LE++  D+TL++     + +Y  EVTMLS+GV+ILY+ ++ K +
Sbjct:  824 DRDTFTQVLAEIHVPEFSPRKGVKIAASDAELKEGGAAPG--------LEDADAQCESILNELPKPSDLAGYRMEPIEFDKDDDSHMEVIVSVSNLRARSYKIPEEDMHKSRFIAGKIIPAIATTTALVTGLVCFEFLKVFQDKPLDHYKNGFVNLALPLFTFAEPIEPKATKTMLKGEEYKWTAWDRLEVDRGDMTLKEFLAYFEKEYDAEVTMLSYGVTILYAMYSQKSR 1047          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5240.13360.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7N3_9PHAE5.960e-12587.50E1 ubiquitin-activating enzyme n=2 Tax=Ectocarpus ... [more]
A0A836CIM1_9STRA2.160e-9069.36Ubiquitin-activating enzyme E1 n=1 Tax=Tribonema m... [more]
A0A7S2G964_9STRA1.000e-7864.02E1 ubiquitin-activating enzyme n=1 Tax=Florenciell... [more]
A0A7S2B3Z9_9STRA7.290e-7552.48Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S4D9B8_HETAK1.010e-7458.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9WKT0_9STRA9.620e-7456.36Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2RXQ6_9STRA1.330e-7353.39Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
I2CSG2_NANGC4.180e-7353.95E1 ubiquitin-activating enzyme n=1 Tax=Nannochloro... [more]
A0A7S1BIN6_9STRA6.610e-7351.27Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6A3N8N5_9STRA2.230e-7253.45E1 ubiquitin-activating enzyme n=4 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5240contigL-elsbetiae_contig5240:10709..12724 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score394.4
Seed ortholog evalue3.7e-107
Seed eggNOG ortholog2880.D7G2V5
Preferred nameUBA1
KEGG koko:K03178
KEGG Pathwayko04120,ko05012,map04120,map05012
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin activating enzyme activity
EggNOG OGsCOG0476@1,KOG2012@2759
EC6.2.1.45
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Exons4
Model size714
Cds size714
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5240.13360.1prot_L-elsbetiae_contig5240.13360.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5240 10709..12724 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816539.4273722-CDS-L-elsbetiae_contig5240:10708..108671622816539.4273722-CDS-L-elsbetiae_contig5240:10708..10867Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 10709..10867 -
1691683632.6442077-CDS-L-elsbetiae_contig5240:10708..108671691683632.6442077-CDS-L-elsbetiae_contig5240:10708..10867Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 10709..10867 -
1622816539.4375901-CDS-L-elsbetiae_contig5240:11101..112541622816539.4375901-CDS-L-elsbetiae_contig5240:11101..11254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 11102..11254 -
1691683632.6559784-CDS-L-elsbetiae_contig5240:11101..112541691683632.6559784-CDS-L-elsbetiae_contig5240:11101..11254Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 11102..11254 -
1622816539.447542-CDS-L-elsbetiae_contig5240:11601..117671622816539.447542-CDS-L-elsbetiae_contig5240:11601..11767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 11602..11767 -
1691683632.6654928-CDS-L-elsbetiae_contig5240:11601..117671691683632.6654928-CDS-L-elsbetiae_contig5240:11601..11767Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 11602..11767 -
1622816539.4601774-CDS-L-elsbetiae_contig5240:12488..127241622816539.4601774-CDS-L-elsbetiae_contig5240:12488..12724Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 12489..12724 -
1691683632.6763043-CDS-L-elsbetiae_contig5240:12488..127241691683632.6763043-CDS-L-elsbetiae_contig5240:12488..12724Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5240 12489..12724 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5240.13360.1

>prot_L-elsbetiae_contig5240.13360.1 ID=prot_L-elsbetiae_contig5240.13360.1|Name=mRNA_L-elsbetiae_contig5240.13360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
MSSIWQDESAYATALGKIDVPEFKPVDGVKIATTEAEAKGGGRGGGGGGG
GGGQLEDVDAQCERMLGELPKREDMKDFRLEVVEFDKDVDDHMEFVTAAS
NLRARVYKIPEADMHRSRQIAGKIIPAIATTTALVTGLVCMEVYKIMQEK
PLESYKNWFLNLALPQFSCSEPLPPAKTTTIIKGSEWRWSAWDSLELEGA
DITLQQLFDIMKDKYGLEVTMLSHGVSILYSFFANKKK
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mRNA from alignment at L-elsbetiae_contig5240:10709..12724-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5240.13360.1 ID=mRNA_L-elsbetiae_contig5240.13360.1|Name=mRNA_L-elsbetiae_contig5240.13360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2016bp|location=Sequence derived from alignment at L-elsbetiae_contig5240:10709..12724- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTTCAATCTGGCAGGACGAATCCGCGTACGCGACGGCGCTGGGCAA GATAGACGTTCCCGAATTCAAGCCCGTTGACGGCGTCAAGATTGCCACCA CGGAGGCAGAGGCCAAGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGCAGTTGGAAGACGTGGACGCACAGTGCGAGCGCATGCTGGG AGAGCTGCCGAAGCGGGAGGACATGAAGGACTTCCGGTGAGATGCTGATT ATCATATCTGTAGGTACTAATCTTATAGCTTAATCTTTTGCTTGGCGAGA TCAACGCCATGTATGTGTGTGTGTCTGATACGCACGTATTCAGTACGGAT GGCATGCATGTTTTGGCCTCATGGTAGATAGCCCTCTCCAATGGTATGAA TATATAGAAGTATATTTCAAAGCCAAATCTCTAAGCTTTTGTACTTGAAG TACCAGCGTTCCCGACGACACGGGCATCCGAATGGCACCAGTGTAGTTTT CCGAAGTGTTGCCCGTGGTCGGTACTGTTGTCCTGCTTGTGAACGAGGAG AGGAAACTAGTGTTTCGTATTGTCCGATATTATCGTGTTGCGATGTTGTG AGTCGTGTGCTGAAGGCCTCCCCCGTGAGACCAAAGTCGGTGCCATTCTC ATGTCAAATGTCATTTCGTTGCAGTACGTGCAATGTCAAATTGACCCATT CTTCCGTTGATCCCAAAGTATGCCTATTTTCAACCGGCATATTTTTTTGG TGTCTCACAACATAACAACAGTAGTGTGGAAACTCGAGTTTGTCGTGGCT CTCCGGATGATGTAAGAAGCACGCGGCTGGGTTATACGTACCATTTTCAA TATCTTGGTATGATCTGATCCTTCGGAGTGATGTGACAGGTTGGAGTGAT GTGATGTGATCAACTGAGAGTTTATACTCTACGGTCTGGTGTGATGTGAT GTGACAGGTTGGAGGTGGTCGAGTTCGACAAGGACGTGGACGACCACATG GAGTTCGTCACGGCGGCCTCCAACCTCCGGGCCCGCGTCTACAAGATCCC AGAGGCGGACATGCACCGCTCCAGGCAGATCGCCGGCAAGATTATCCCGG CCATCGCCACCACCACGGCGCTTGTGAGAAAGGCTCTCCGTTTTCCATTT TTTTTTGTTGTTGCATCAAAGCGCAGAGGCATATACATACATGTATTACG AGAGATGTACCTACTTGTTTGCCAGGGGGACTAAGGGTACACCGCCGCCT CTGATTACTCACCATCTCTTTCTCCCATTTTCGGGATGGCCGAAGATCCC ACAAGCCGTTTTTCTGCTTCATCTTGAGAATTATTCGCGTCATTTTCATC GCCGACAACAGCCTCAGCACAACAGTTACCCCGGGCAATGATGCCCTGGT CTGATCACGCTCATTGATTTGATGGTTGTTGGACATTGATCCTTAAATAA CACCACAAAACCTGGCGCAGGTGACGGGCCTGGTGTGCATGGAGGTGTAC AAGATCATGCAGGAGAAGCCGCTAGAGTCGTACAAGAACTGGTTCCTCAA CCTAGCCCTCCCGCAGTTCTCGTGCTCGGAGCCGCTGCCGCCCGCCAAGA CTACAACCATCATCAAGGGATCGGTCAGTACTGTTTGTACCCGAGAGTTG CTGTTCGTGTTTGATGGACCACATATTTTGGCCGCAGTTCGCTGATACAT CTGGGTACTTCCTGTGTGGTACATACTCCGGTATATACGCATTTGCTATA TAATTTTACACTCGGAGATTCTCCAACATCGTGCGCACTTCTTCAGTACG TCATGAGCTGATGGTCGGGCCTCTCACCCTATTTTTTGTTTGATTTGGTG GACGCAGGAGTGGAGGTGGTCGGCGTGGGATAGCCTGGAGCTGGAAGGGG CAGATATCACTCTGCAGCAGCTGTTCGACATCATGAAGGACAAGTACGGT CTGGAGGTGACGATGCTCAGCCATGGGGTGTCCATCCTGTACAGCTTTTT CGCCAACAAGAAGAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5240:10709..12724-

>mRNA_L-elsbetiae_contig5240.13360.1 ID=mRNA_L-elsbetiae_contig5240.13360.1|Name=mRNA_L-elsbetiae_contig5240.13360.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1428bp|location=Sequence derived from alignment at L-elsbetiae_contig5240:10709..12724- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTTCAATCTGGCAGGACGAATCCGCGTACGCGACGGCGCTGGGCAA
GATAGACGTTCCCGAATTCAAGCCCGTTGACGGCGTCAAGATTGCCACCA
CGGAGGCAGAGGCCAAGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGCAGTTGGAAGACGTGGACGCACAGTGCGAGCGCATGCTGGG
AGAGCTGCCGAAGCGGGAGGACATGAAGGACTTCCGATGTCTTCAATCTG
GCAGGACGAATCCGCGTACGCGACGGCGCTGGGCAAGATAGACGTTCCCG
AATTCAAGCCCGTTGACGGCGTCAAGATTGCCACCACGGAGGCAGAGGCC
AAGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCAGTT
GGAAGACGTGGACGCACAGTGCGAGCGCATGCTGGGAGAGCTGCCGAAGC
GGGAGGACATGAAGGACTTCCGGTTGGAGGTGGTCGAGTTCGACAAGGAC
GTGGACGACCACATGGAGTTCGTCACGGCGGCCTCCAACCTCCGGGCCCG
CGTCTACAAGATCCCAGAGGCGGACATGCACCGCTCCAGGCAGATCGCCG
GCAAGATTATCCCGGCCATCGCCACCACCACGGCGCTTGTTGGAGGTGGT
CGAGTTCGACAAGGACGTGGACGACCACATGGAGTTCGTCACGGCGGCCT
CCAACCTCCGGGCCCGCGTCTACAAGATCCCAGAGGCGGACATGCACCGC
TCCAGGCAGATCGCCGGCAAGATTATCCCGGCCATCGCCACCACCACGGC
GCTTGTGACGGGCCTGGTGTGCATGGAGGTGTACAAGATCATGCAGGAGA
AGCCGCTAGAGTCGTACAAGAACTGGTTCCTCAACCTAGCCCTCCCGCAG
TTCTCGTGCTCGGAGCCGCTGCCGCCCGCCAAGACTACAACCATCATCAA
GGGATCGGTGACGGGCCTGGTGTGCATGGAGGTGTACAAGATCATGCAGG
AGAAGCCGCTAGAGTCGTACAAGAACTGGTTCCTCAACCTAGCCCTCCCG
CAGTTCTCGTGCTCGGAGCCGCTGCCGCCCGCCAAGACTACAACCATCAT
CAAGGGATCGGAGTGGAGGTGGTCGGCGTGGGATAGCCTGGAGCTGGAAG
GGGCAGATATCACTCTGCAGCAGCTGTTCGACATCATGAAGGACAAGTAC
GGTCTGGAGGTGACGATGCTCAGCCATGGGGTGTCCATCCTGTACAGCTT
TTTCGCCAACAAGAAGAAAGAGTGGAGGTGGTCGGCGTGGGATAGCCTGG
AGCTGGAAGGGGCAGATATCACTCTGCAGCAGCTGTTCGACATCATGAAG
GACAAGTACGGTCTGGAGGTGACGATGCTCAGCCATGGGGTGTCCATCCT
GTACAGCTTTTTCGCCAACAAGAAGAAA
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