|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 2 |
Model size | 468 |
Cds size | 468 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816537.437568-CDS-L-elsbetiae_contig523:22294..22504 | 1622816537.437568-CDS-L-elsbetiae_contig523:22294..22504 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig523 22295..22504 - |
1691683631.3139074-CDS-L-elsbetiae_contig523:22294..22504 | 1691683631.3139074-CDS-L-elsbetiae_contig523:22294..22504 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig523 22295..22504 - |
1622816537.448555-CDS-L-elsbetiae_contig523:23304..23562 | 1622816537.448555-CDS-L-elsbetiae_contig523:23304..23562 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig523 23305..23562 - |
1691683631.3250232-CDS-L-elsbetiae_contig523:23304..23562 | 1691683631.3250232-CDS-L-elsbetiae_contig523:23304..23562 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig523 23305..23562 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig523.13340.1 >prot_L-elsbetiae_contig523.13340.1 ID=prot_L-elsbetiae_contig523.13340.1|Name=mRNA_L-elsbetiae_contig523.13340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=156bp
SATCSPCPAGHSCSSAAAAPVACLAGEFASAGALSCSVCADGNYNMLEAQ QFCQACPVGHECPDKTSEPTRCSSGSYSSGNATACEVPTECPAGTASPGG ATNCTTCADGTYSDTIGSTVCTSCPAGKSCEDKSADPEPCTNGTFSQIGD TSCSVC back to topmRNA from alignment at L-elsbetiae_contig523:22295..23562- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig523.13340.1 ID=mRNA_L-elsbetiae_contig523.13340.1|Name=mRNA_L-elsbetiae_contig523.13340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1268bp|location=Sequence derived from alignment at L-elsbetiae_contig523:22295..23562- (Laminarionema elsbetiae ELsaHSoW15) TCCGCCACTTGTTCCCCCTGCCCGGCCGGGCACTCGTGCAGCTCGGCGGC
GGCGGCACCCGTGGCGTGCCTGGCGGGAGAGTTTGCCAGCGCCGGTGCTC
TGAGCTGCTCAGTCTGCGCGGACGGCAACTACAACATGCTCGAGGCGCAG
CAGTTCTGCCAGGCCTGCCCGGTCGGCCACGAGTGCCCCGACAAGACTTC
GGAGCCGACTCGGTGCTCCTCGGGGTCGTACAGCTCCGGGAACGCCACCG
CGTGCGAAGTTTGCCCGGCGGGGTCCTACTGCTCGAACACTGGGAGCTCG
CCGGAGGTCTGCACCGAGGGGTCGTACTCGCTCGACAACTGGGCGTACTG
CGTGTCATGCCCGCCGGGACAGTTCTGTTTCAACACCAATCAGGTTTGTG
CAGGTCTATCTCTGTACATAAACACGGTAATGTTATCTATGTGTTGTTTT
CCCTTTCATCGGCAGACAAGTGCAATTTTCATTACCGGCCAACAAGAGTG
TGCGTCCTGGGCAGCTCTCCTTAACGTTCGTATGATTGGAAGATCGTCAC
CCAGTGGTTGTACAGCTGGTACACAACTTGGAGTTATCTTCTTACCGTAT
AATGTCCAGTTTTGTCCTGAGCAGTTCAGCATGTTGTGGCCCCGTTTGCT
TTTCCTAGGTCGGCTACCGCCTCTTCAACCTCTCACAAGTCGCTTCCTAC
GGAACAAGACACCGCTTGCACCCCAACAACTCTCACCACACTGTTTGAGC
CGTCGGCATGACAGGCGCTCTCGTCCCTCGCGAGACTTCTGCGCGTCTCT
ATTCCTCAAGTCTCAATTTTCCAAGGAACGTTGTCTCTATATGTCTTTAT
AAGAAGTATCTCGTGTTTTGTGCGAAGGAATGGAACTTCGGAAATGGCAT
CTTGTATAAACGCTACATAGTTCGGTAGTTCCACCCGTCTCGTGACTAAC
TTTGTTGATCCAGTTCTCGCCCCCCGCCCTCCGCCCCGTGCGCCCGACCC
GTCATATGGACGTCCCTTTGTCCAAACGTACCCCACACCATGTAACACCA
TACTCAAGGTGCCGACGGAATGCCCGGCAGGCACGGCCTCCCCTGGCGGC
GCAACCAACTGCACTACGTGCGCCGACGGTACGTACTCCGACACCATCGG
CTCCACAGTGTGCACCTCTTGCCCCGCCGGAAAGTCGTGCGAGGACAAGT
CGGCAGATCCAGAGCCCTGCACCAACGGCACCTTTAGCCAGATTGGCGAT
ACATCATGCTCGGTCTGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig523:22295..23562- >mRNA_L-elsbetiae_contig523.13340.1 ID=mRNA_L-elsbetiae_contig523.13340.1|Name=mRNA_L-elsbetiae_contig523.13340.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=936bp|location=Sequence derived from alignment at L-elsbetiae_contig523:22295..23562- (Laminarionema elsbetiae ELsaHSoW15) TCCGCCACTTGTTCCCCCTGCCCGGCCGGGCACTCGTGCAGCTCGGCGGC GGCGGCACCCGTGGCGTGCCTGGCGGGAGAGTTTGCCAGCGCCGGTGCTC TGAGCTGCTCAGTCTGCGCGGACGGCAACTACAACATGCTCGAGGCGCAG CAGTTCTGCCAGGCCTGCCCGGTCGGCCACGAGTGCCCCGACAAGACTTC GGAGCCGACTCGGTGCTCCTCGGGGTCGTACAGCTCCGGGAACGCCACCG CGTGCGAATCCGCCACTTGTTCCCCCTGCCCGGCCGGGCACTCGTGCAGC TCGGCGGCGGCGGCACCCGTGGCGTGCCTGGCGGGAGAGTTTGCCAGCGC CGGTGCTCTGAGCTGCTCAGTCTGCGCGGACGGCAACTACAACATGCTCG AGGCGCAGCAGTTCTGCCAGGCCTGCCCGGTCGGCCACGAGTGCCCCGAC AAGACTTCGGAGCCGACTCGGTGCTCCTCGGGGTCGTACAGCTCCGGGAA CGCCACCGCGTGCGAAGTGCCGACGGAATGCCCGGCAGGCACGGCCTCCC CTGGCGGCGCAACCAACTGCACTACGTGCGCCGACGGTACGTACTCCGAC ACCATCGGCTCCACAGTGTGCACCTCTTGCCCCGCCGGAAAGTCGTGCGA GGACAAGTCGGCAGATCCAGAGCCCTGCACCAACGGCACCTTTAGCCAGA TTGGCGATACATCATGCTCGGTCTGCGTGCCGACGGAATGCCCGGCAGGC ACGGCCTCCCCTGGCGGCGCAACCAACTGCACTACGTGCGCCGACGGTAC GTACTCCGACACCATCGGCTCCACAGTGTGCACCTCTTGCCCCGCCGGAA AGTCGTGCGAGGACAAGTCGGCAGATCCAGAGCCCTGCACCAACGGCACC TTTAGCCAGATTGGCGATACATCATGCTCGGTCTGC back to top
|