mRNA_L-elsbetiae_contig5229.13336.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5229.13336.1
Unique NamemRNA_L-elsbetiae_contig5229.13336.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A6H5KZD5_9PHAE (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZD5_9PHAE)

HSP 1 Score: 512 bits (1319), Expect = 5.850e-180
Identity = 261/287 (90.94%), Postives = 275/287 (95.82%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANKQRQGQDNAAS 870
            IR+LEE +E LE KMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYA EQGW+LK+I++A VEAGG+RTVIAEV+G+KVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVD+V VNIR EDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQA TSGNRKAQVGSG+RSEKIRTYNWKDSRCSDHRIGKNFPLN+FLSGSGLDDMIGACILLDQQELMAELA KQRQGQ+   +
Sbjct:  160 IRDLEEVMEALETKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYALEQGWSLKVIESAMVEAGGFRTVIAEVSGDKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVAVNIRPEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAETSGNRKAQVGSGSRSEKIRTYNWKDSRCSDHRIGKNFPLNNFLSGSGLDDMIGACILLDQQELMAELAAKQRQGQEGGVA 446          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A836CKN4_9STRA (Peptide chain release factor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN4_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 5.800e-147
Identity = 206/281 (73.31%), Postives = 251/281 (89.32%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANKQRQG 852
            +R+LE  +E++E  +KL+LLPTDPND RNVMLEIRAGTGGDEAA+WA +LL VY+KYA E GW L++++ A+ + GG+++++AEV G+ VYSKLKYEAGVHRVQRVPATE+QGRVHTSTATVA+MPEVD+VTV I   DI++ TAR+GGSGGQNVNKVE+AVDLFHKPTGIRIFC QERSQLKN+E+AM +LRSR+Y+IELEKQQAA SGNR+AQVGSGARSEKIRTYNWKDSRCSDHRI +N+PL++FLSG+ +DDMI ACI++DQQE + E+A KQ QG
Sbjct:   88 MRDLEARMERMEVDLKLMLLPTDPNDERNVMLEIRAGTGGDEAAIWAGDLLNVYRKYATEMGWTLRVVEEAAADMGGFKSIVAEVRGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTATVAVMPEVDEVTVRIDPGDIDMHTARAGGSGGQNVNKVETAVDLFHKPTGIRIFCQQERSQLKNKELAMSILRSRLYEIELEKQQAAVSGNRRAQVGSGARSEKIRTYNWKDSRCSDHRINRNWPLDTFLSGT-IDDMIAACIVMDQQEQLQEMARKQAQG 367          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A6S9M8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9M8F3_HETAK)

HSP 1 Score: 392 bits (1008), Expect = 3.410e-133
Identity = 196/278 (70.50%), Postives = 235/278 (84.53%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANKQ 843
            I E E  +++L+ K+K+LLLPTDPND RN MLEIRAGTGGDEA +WA +L+ VYKKYAQ QGW   +I+ ++ + GG ++   EV GE VYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVD+VTV I  +DIE+ TARSGG+GGQNVNKVE+A DLFHKPTGIRIFCTQERSQLKN+E+AM LLR+R+Y++ELEKQ++  SG R+AQVG+GARSEKIRTYNWKDSRCSDHRIG+NFPL  FL G  +DD+I A I+ DQQ+ + E+A +Q
Sbjct:  136 IDECETVMDELQEKLKILLLPTDPNDERNCMLEIRAGTGGDEAGIWAGDLVEVYKKYAQTQGWACTLIEESAADMGGVKSCTLEVRGEAVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDEVTVKIDPKDIELTTARSGGAGGQNVNKVETAADLFHKPTGIRIFCTQERSQLKNKEMAMNLLRARLYEMELEKQRSEVSGARRAQVGTGARSEKIRTYNWKDSRCSDHRIGQNFPLQMFLDGK-VDDIIQALIVSDQQDQLKEMAEEQ 412          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A1X6PEJ9_PORUM (RF_PROK_I domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PEJ9_PORUM)

HSP 1 Score: 379 bits (974), Expect = 2.250e-127
Identity = 186/277 (67.15%), Postives = 230/277 (83.03%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANK 840
            + ELEE IE+LE+++K+LLLP DPND +N MLEIRAGTGGDEA +WA++L+ VY KYA+   W +  +  +  EAGG +  + EV G+ VYSKLKYEAGVHRVQRVPATE+QGRVHTST+TVAIMPEVD+V V I  +D++I T RSGGSGGQNVNKVE+AVDL HKPTGIR+FCTQERSQLKNRE+AM++LR+++Y++ELE   A  SG R+AQVG+GARSEKIRTYN+KDSR SDHR+G+NF LN+FL G  +DDMI ACI  DQQE + E+AN+
Sbjct:  184 VSELEEVIEELESRLKVLLLPKDPNDEKNCMLEIRAGTGGDEAGIWASDLVRVYTKYAEAMSWRVSTVSESLSEAGGVKECVLEVTGDAVYSKLKYEAGVHRVQRVPATESQGRVHTSTSTVAIMPEVDEVDVKIDMKDVDISTTRSGGSGGQNVNKVETAVDLMHKPTGIRVFCTQERSQLKNRELAMQILRAKLYELELEAHNAEVSGRRRAQVGTGARSEKIRTYNYKDSRVSDHRLGRNFSLNAFLEGD-IDDMIQACIFADQQEQLEEMANE 459          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A140ECJ7_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Trachydiscus minutus TaxID=1032745 RepID=A0A140ECJ7_9STRA)

HSP 1 Score: 375 bits (964), Expect = 2.300e-126
Identity = 179/280 (63.93%), Postives = 237/280 (84.64%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANKQRQ 849
            +++L+ + E+LE ++ +L+LP DP D++NVMLEIRAGTGG EA L+A +L+ VY ++ Q QGW +++ID +  + GGY+T + E+ G+KVYSK+K+EAGVHRVQRVPATETQGRVHTSTATVA+MPEVD+VTV I  ++IE+ TARSGGSGGQNVNKVE+AVDL HKPTGIRIFCTQERSQLKN+E+AM LLRS++Y++ELEKQQ   +G R++Q+GSG RSEKIRTYNWKDSRC+DHR+G+NF L+ FLSG  +D+MI  C+L++Q E + +++ +Q Q
Sbjct:  147 VKQLDSSREELEDRLMILMLPQDPMDDKNVMLEIRAGTGGSEAGLFAGDLIDVYTRFGQTQGWKVRMIDESRNDEGGYKTAVLEIQGDKVYSKMKFEAGVHRVQRVPATETQGRVHTSTATVAVMPEVDEVTVKIDPKEIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMTLLRSKLYEMELEKQQEQITGQRRSQIGSGGRSEKIRTYNWKDSRCTDHRLGQNFNLDKFLSGE-IDEMINQCLLMEQNEKLEQMSKEQLQ 425          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A7S3JVW2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVW2_9STRA)

HSP 1 Score: 372 bits (955), Expect = 7.510e-126
Identity = 182/277 (65.70%), Postives = 229/277 (82.67%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANK 840
            +RELE  I++LE +++LLLLP+DPND RNVMLEIRAGTGG EA++WA  LL  Y  Y+Q QGW+ KI+DT+  + GGYR+V  E+ G+ VYSKLK+E+GVHRVQRVPATE+QGRVHTSTATVAIMPEVD+VT+ I  +DI++ TARSGG+GGQNVNKVE+A DL HKPTGIRIFCTQERSQLKN+E+AM+LLR+++Y+I  +++ A     R  QVG+G RSEKIRTYNWKDSRC+DHR+ +NFPL+  L+G  LD +I ACI L Q E+++ELA K
Sbjct:   89 VRELESKIKELENELQLLLLPSDPNDERNVMLEIRAGTGGSEASIWAGNLLKAYTAYSQSQGWSTKIVDTSPADDGGYRSVTVEIAGDSVYSKLKFESGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVTIQIDPKDIDMSTARSGGAGGQNVNKVETACDLLHKPTGIRIFCTQERSQLKNKELAMQLLRTKLYEIAQQERNAEIRNTRLMQVGTGGRSEKIRTYNWKDSRCTDHRLNQNFPLDKVLNGD-LDPIISACIALAQSEMLSELAEK 364          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A5J4YU86_PORPP (Peptide chain release factor 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU86_PORPP)

HSP 1 Score: 374 bits (959), Expect = 3.580e-125
Identity = 184/275 (66.91%), Postives = 230/275 (83.64%), Query Frame = 1
Query:   16 ELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAELANK 840
            ELE  IE+LE  +++LLLP+DPND++NVM+EIRAGTGGDEA +WA +++  Y KY Q  GW  +I+  +  E GGY+  I +V G+KVYSK+KYEAGVHRVQRVPATE+QGRVHTSTATVAIMPEVD+VTV I  +DIE+ TARSGG+GGQNVNKVE+AVDL HKPTGIRIFCTQERSQL NRE+AM +LR+R+Y+IELEKQQ+   G R AQVG+GARSEK+RTYN+KDSRC+DHR+ KNFPL SFL G+ ++++I +CI+ DQQ  + E+A +
Sbjct:  184 ELETEIEQLEKDLQVLLLPSDPNDDKNVMVEIRAGTGGDEAGIWAGDIVRAYTKYWQALGWQAQILSASEAETGGYKECIIQVTGDKVYSKMKYEAGVHRVQRVPATESQGRVHTSTATVAIMPEVDEVTVKIDPKDIEMTTARSGGAGGQNVNKVETAVDLTHKPTGIRIFCTQERSQLLNRELAMTMLRARLYEIELEKQQSEVRGARLAQVGTGARSEKVRTYNYKDSRCTDHRLNKNFPLQSFLDGA-IEELIQSCIIDDQQRKLQEMAEQ 457          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A7S4F4Q1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F4Q1_CHRCT)

HSP 1 Score: 373 bits (957), Expect = 4.160e-125
Identity = 183/274 (66.79%), Postives = 232/274 (84.67%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAEL 831
            +R+LE+ +E L+ ++K+LLLP+DPND++NVMLEIRAGTGGDEAA+WA++LL +Y ++AQEQGW  +++  +  EAGG R    E+ G+ VYSKLK+EAGVHRVQRVPATETQGR+HTSTATVAIMPEVD+VTV I  +DIE+ TARSGG+GGQNVNKVE+AVDL HKPTGIR+F TQERSQLKN+E+AM +LRSR+Y +++E+Q A  +  RK QVGSGARSEKIRTYN+KDSRC+DHR+  NFPL+S LSG+ +  +I ACI +DQQE + EL
Sbjct:  165 MRDLEDELEALDERIKVLLLPSDPNDDKNVMLEIRAGTGGDEAAIWASDLLNLYTRFAQEQGWQTRVVSLSDSEAGGCRDATIEIKGDSVYSKLKFEAGVHRVQRVPATETQGRIHTSTATVAIMPEVDEVTVTIDPKDIEMSTARSGGAGGQNVNKVETAVDLTHKPTGIRLFVTQERSQLKNKELAMSMLRSRLYAMQIEEQAAKIASQRKMQVGSGARSEKIRTYNYKDSRCTDHRLSSNFPLDSVLSGN-IAPIIDACIAMDQQEQLREL 437          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A7S3REU4_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3REU4_9SPIT)

HSP 1 Score: 369 bits (946), Expect = 9.180e-125
Identity = 178/274 (64.96%), Postives = 233/274 (85.04%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAEL 831
            ++E+E+ +E+L+ +MK+LLLP+DPND RNVMLEIRAGTGGDEAA+WA++LL +Y++YA+EQ W ++++ ++  EAGG R V  E+ G+ VYSKLK+EAGVHRVQRVPATETQGR+HTSTATVAIMPEVD+VTV I   DIE+  ARSGG+GGQNVNKVE+A+DL HKPTGIR+F TQERSQLKN+E+AM++LR+++Y ++LE+Q A  +  RK QVG+GARSEKIRTYN+KDSRC+DHR+G NF L+  L+G G++ +I  CI LD+QE + EL
Sbjct:   73 MKEVEQQMEELDERMKVLLLPSDPNDERNVMLEIRAGTGGDEAAIWASDLLNLYQRYAKEQAWQVRVVSSSDSEAGGVRDVTLEIKGDSVYSKLKFEAGVHRVQRVPATETQGRIHTSTATVAIMPEVDEVTVEINPGDIEMHAARSGGAGGQNVNKVETAIDLTHKPTGIRLFVTQERSQLKNKELAMQMLRAKLYALQLEEQHAKVASARKMQVGTGARSEKIRTYNYKDSRCTDHRLGSNFALDGVLAG-GIEPIIQQCIALDEQERLKEL 345          
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Match: A0A140ECK3_9STRA (Plastid peptide chain release factor 1 n=1 Tax=Monodopsis sp. MarTras21 TaxID=1745953 RepID=A0A140ECK3_9STRA)

HSP 1 Score: 370 bits (950), Expect = 1.860e-124
Identity = 181/274 (66.06%), Postives = 231/274 (84.31%), Query Frame = 1
Query:   10 IRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWAAELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARSGGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVYDIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLNSFLSGSGLDDMIGACILLDQQELMAEL 831
            I++LE    ++EA++ +L+LP DP D+RNVMLEIRAGTGG EA L+A  L+ VY +YA  QGW +++I+ +  + GGY+  + E+ G+KVYSKLK+EAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDV V I A+DIE+ TARSGGSGGQNVNKVE+AVDL HKPTGIRIFCTQERSQLKN+E+AM+LLRSR++++E EKQ+ + +G R++Q+GSG RSEKIRTYNWKDSRC+DHR+G+NFPL +FL G+ L+ +   C+L +QQE +AE+
Sbjct:  133 IKDLEAQQGEIEARLVVLMLPQDPLDDRNVMLEIRAGTGGSEAGLFAGNLVDVYTRYATAQGWRVRVIEDSRNDEGGYKNAVLEIQGDKVYSKLKFEAGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVQVQIDAKDIEMHTARSGGSGGQNVNKVETAVDLLHKPTGIRIFCTQERSQLKNKELAMQLLRSRLFEMEQEKQRESIAGQRRSQIGSGGRSEKIRTYNWKDSRCTDHRLGQNFPLQTFLDGN-LEGITNQCLLQEQQEKLAEM 405          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5229.13336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZD5_9PHAE5.850e-18090.94RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CKN4_9STRA5.800e-14773.31Peptide chain release factor 1 n=1 Tax=Tribonema m... [more]
A0A6S9M8F3_HETAK3.410e-13370.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1X6PEJ9_PORUM2.250e-12767.15RF_PROK_I domain-containing protein n=1 Tax=Porphy... [more]
A0A140ECJ7_9STRA2.300e-12663.93Plastid peptide chain release factor 1 n=1 Tax=Tra... [more]
A0A7S3JVW2_9STRA7.510e-12665.70Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A5J4YU86_PORPP3.580e-12566.91Peptide chain release factor 1 n=1 Tax=Porphyridiu... [more]
A0A7S4F4Q1_CHRCT4.160e-12566.79Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3REU4_9SPIT9.180e-12564.96Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A140ECK3_9STRA1.860e-12466.06Plastid peptide chain release factor 1 n=1 Tax=Mon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5229contigL-elsbetiae_contig5229:9414..12952 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score515.8
Seed ortholog evalue1.3e-143
Seed eggNOG ortholog2880.D7FY16
Preferred nameMRF1
KEGG koko:K02835
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009536,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0010467,GO:0016020,GO:0016043,GO:0016149,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032543,GO:0032544,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0061024,GO:0070126,GO:0071704,GO:0071840,GO:0097159,GO:0140053,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.translation release factor activity
EggNOG OGsCOG0216@1,KOG2726@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Ec32 ortholog descriptionpeptide chain release factor 1
Ec32 orthologEc-08_004700.1
Exons5
Model size876
Cds size876
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5229.13336.1prot_L-elsbetiae_contig5229.13336.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5229 9414..12952 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816537.2906954-CDS-L-elsbetiae_contig5229:9413..96351622816537.2906954-CDS-L-elsbetiae_contig5229:9413..9635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 9414..9635 -
1691683631.2189546-CDS-L-elsbetiae_contig5229:9413..96351691683631.2189546-CDS-L-elsbetiae_contig5229:9413..9635Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 9414..9635 -
1622816537.3032749-CDS-L-elsbetiae_contig5229:10343..105171622816537.3032749-CDS-L-elsbetiae_contig5229:10343..10517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 10344..10517 -
1691683631.2393153-CDS-L-elsbetiae_contig5229:10343..105171691683631.2393153-CDS-L-elsbetiae_contig5229:10343..10517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 10344..10517 -
1622816537.3159115-CDS-L-elsbetiae_contig5229:11026..111851622816537.3159115-CDS-L-elsbetiae_contig5229:11026..11185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 11027..11185 -
1691683631.2513154-CDS-L-elsbetiae_contig5229:11026..111851691683631.2513154-CDS-L-elsbetiae_contig5229:11026..11185Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 11027..11185 -
1622816537.3296845-CDS-L-elsbetiae_contig5229:11985..121141622816537.3296845-CDS-L-elsbetiae_contig5229:11985..12114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 11986..12114 -
1691683631.2674696-CDS-L-elsbetiae_contig5229:11985..121141691683631.2674696-CDS-L-elsbetiae_contig5229:11985..12114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 11986..12114 -
1622816537.3404357-CDS-L-elsbetiae_contig5229:12760..129521622816537.3404357-CDS-L-elsbetiae_contig5229:12760..12952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 12761..12952 -
1691683631.27604-CDS-L-elsbetiae_contig5229:12760..129521691683631.27604-CDS-L-elsbetiae_contig5229:12760..12952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5229 12761..12952 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5229.13336.1

>prot_L-elsbetiae_contig5229.13336.1 ID=prot_L-elsbetiae_contig5229.13336.1|Name=mRNA_L-elsbetiae_contig5229.13336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=292bp
KKKIRELEETIEKLEAKMKLLLLPTDPNDNRNVMLEIRAGTGGDEAALWA
AELLGVYKKYAQEQGWNLKIIDTASVEAGGYRTVIAEVNGEKVYSKLKYE
AGVHRVQRVPATETQGRVHTSTATVAIMPEVDDVTVNIRAEDIEIKTARS
GGSGGQNVNKVESAVDLFHKPTGIRIFCTQERSQLKNREVAMKLLRSRVY
DIELEKQQAATSGNRKAQVGSGARSEKIRTYNWKDSRCSDHRIGKNFPLN
SFLSGSGLDDMIGACILLDQQELMAELANKQRQGQDNAASR*
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mRNA from alignment at L-elsbetiae_contig5229:9414..12952-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5229.13336.1 ID=mRNA_L-elsbetiae_contig5229.13336.1|Name=mRNA_L-elsbetiae_contig5229.13336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3539bp|location=Sequence derived from alignment at L-elsbetiae_contig5229:9414..12952- (Laminarionema elsbetiae ELsaHSoW15)
AAAAAAAAGATCCGAGAGTTGGAGGAGACGATCGAGAAGCTCGAGGCCAA GATGAAGCTCCTCCTGCTCCCGACGGACCCGAACGACAACCGCAACGTCA TGCTCGAGATCAGGGCCGGCACGGGCGGCGACGAGGCCGCTCTGTGGGCC GCGGAGCTCCTGGGCGTGTACAAGAAGTACGCCCAAGAACAGGTATATTG TATCGAATGTAGATGTGCCAAACTCCTATTCTGCCCCCCCTCCGCCGACC GATGGCTCTCGAGGGCCAACAGAAAGCGCAAGCCTCTTACGTAGGCGGAG TTGCCCAATTTTTGCCCCAAGTTTTTAGGTTGTTGTCGTTCTCTAGCAGT TTTGTATAATCGTGAAAATCTCACCAAATCACGGCTAATGGACTTTATTT AGTGCGTGAGCTCAACAACTCATGCGTGAGATCGATCACGCAGCCGTCTT ATTTTGTCGCGCGCCTCTTTTCCAATTATTCTTTGTAGTTTCTCACTCAT TTGTTCGTGGATGATATGTTTTTAGTCCCATCTTCATGCATACGAAGTAC ACAACGTAGTATGTAGACTATGTACATCAATGTGTAGGATGTTGTTTACG ACCGAGAGGCTGCCCGGACCGCCCGCTGGCTCGATCGGTCCTCTGTTAAT GTTTGAGGCGCGCGTAGGTCTCCTAACTGGCTGTGTCGTGGTCGGCCCCT ACCGTTGTCTTCTAGTTGCTTCCTCTCTATATATATGTCTATGTATGAAG TATATACTTGAAGTACATATCTCTCACGCGCACACACACACGCTTCTGAT TTACGCGGTCGCTGTTGTGGTTGTCTGACGGTGCTCAGGGATGGAACCTC AAGATTATCGACACGGCGTCGGTGGAGGCGGGAGGCTACCGCACGGTGAT CGCCGAAGTCAACGGGGAGAAGGTGTACAGCAAGCTCAAGTACGAAGCCG GCGTGCACCGTGTACAGGTGTGCTGTGCTGTGCTGTGTTGTATCTCTTTT GCCTCGTATTGCCTTGCCTTGTGTTGCACATCTCGAGAGCCTGCCGAAGA TATGTTGCAGGTACCGTAAACCGCACAGGATACCCCCCCCCCCCCCCCCC CGGCCAAAAATTTGGGCCCCTTTTTTTTTGGGGGGTAACTTCAGGGGGGG GGGGGGGTTATTTGGGGGGCCCGGGGTGTTTTTTGGGNNNNNNNTCTCCC TTTCCTTGGTTGGACACCCCCCGGGCCCCGCCGAAAATTATTTCCGGGTT CCCTAAACCCCCCCGGGCCCCCCCCCCCCCCCCCCCCGGTCATATATCTG AGCGCCTTGTTTTATGCGGCGTAACTTCAGGGGGGGGGGGTGTTATATTC GGTGCCCCGGGTGATATTTTGGGCCTCGGTTCTGTGTCTGGAAATATCGT CGCCGGGGTGGTATACTGTAGGGAGGGTGGTGTCTATTGTGGGTGTGGCA TCTCTTGTGTGGTTTACGACATGTATGTAGGTGTCTTGGTCTCTGCTGGG AGGAAGTGGGAGCGTTGTTTCGCCTCGAGCAAGCGGTTTATGCGTGGTCA ATCAATAAAAGGTATGGTCAAAGGAAAGGCGAACTCATGTACACCCCGCT CCCTACGCCCCTCAGACCCTTTTGCTTCGTCCCTCAAGTGGCGACTGGCT TACTTGCGGTCGAATTGGTATTAGGCTCAAAACAAACGAGCCCCCCCCCC CCCCCCTCCCCCGGCCCTGCCACCCGCCCGTCTGCCGTCCACGTACCCCC CTTTCCCCGTTTGGAAGCGCGTGCCGGCGACCGAGACTCAGGGGCGCGTG CACACCAGCACGGCGACGGTGGCGATCATGCCGGAGGTTGACGATGTGAC CGTCAACATCCGGGCCGAGGACATCGAGATCAAGACGGCGCGCTCCGGGG GCTCGGGCGGGCAGAACGTCAACAAGGTGAGGTGAAAGCAGAAGGAGGCG TTTTTTTTGTTTTACTCTCTGTAGATGTGGTGCCCTCGTGTGTGTGCCCG GCTGGTCCGGGCGCCGATCACTGCGTGGGGCTTACTTAACCGACCTTGGA GGAGGAGGACATGTCGAATCAAAAAGCTTGTCGGAGGGGTGCAATCCTGC GTCGGCGAGGGGACAGGAGAGAGGAGGGCTTCTTGCTTCGCGGATGCACG CATGTTCTGCCACGTTCATTGTTGTTATTGTTGTTGTTGTTGCCGTTACC GTTGGAGTCACGACGATGTTGTCACCTCTGTGGCCGCAAACTATTATTTT ACTTCACTGTTGGCGGTCCCGCTGTTGTATTTATGCAGCCGACGTTTTCT TGGCCGTGTCGCCACCTCGTCCGGCCGTTTCAGGTGTGTGTGTTTTATTT CGGTTCTCCCACGTCACCCCCCCCCCCCCCCGCCCACGCGCCCATTCAAA TCCAACCCAAAACCTCCAATTTCCACCGCGACCAGGTCGAGTCCGCGGTG GACCTCTTCCACAAGCCCACGGGGATCCGCATCTTCTGCACGCAAGAGCG CAGCCAGCTCAAGAACAGGGAGGTGGCGATGAAGCTGCTGCGCTCGAGGG TGTACGACATCGAGCTGGAGAAGCAGCAGGCAGCGACTTCCGGCAATCGC AAGGCGCAGGTATGACAGCGAGCGAGCGGCCCCGTGGCGGTTGTCTCTGG GGGCTCCGTAGAGGTTGCGGTGTGGGTTCCCTGGTGGCCGGGTGGAGTCA CGGAGCAGACGATGCCTCGTTGTTGTCGTTGTTGGTGGCGGTGGCGGTGG TGATGGTGTGGTGTTGGTGTTGTTTGTCCGACAGTCTGGGTGTTGTTGTT GTTGTTGTCAGCAGTTCCTCTCCTCGGATAGTCACACGTGTCTTGCCTAA TAGATATGGTACCCTTTTAGCTGCCTGTCTTGCTTCGAAAACCGCAAGTT TTTCACGATATGCGGAGGGGGGGACTTCAGGTTGTTTCTGTTGTACGCAG GAGTTTTCCACTTTGCCCAGGCAGGCAGGCAGGCAGGCAGGCAGCCGTAT CACGGTTAGAGGCTGCGTCCTGCTGCCAAATGATCCATCCCGATACATAC CTTGAGGCAAATACATTCCTGGGTAGACTAGTACAGCAGCCCAATACCAC CTGCTGTGTTGTACCTTCTTTGCTGATGTTGCTCCCCCGCCAACGAAAAT CGCGACGCGCGAGGGGTGCTCTGCGCTGTGAAGCCTTCTCAGGGATGAAT GCTCGGATGATATATATCGGCTGTGCATTATATAAAGGTTTACGCGACCG CCGCGCATGCCGACCCTCCCCCCCCCATCCCCACCCCCACCCAAACCCCG CTTCCTCTGATAATCAGGTGGGGTCGGGGGCCCGGTCGGAGAAGATCCGA ACGTACAACTGGAAGGACAGCCGGTGCTCGGACCACCGAATAGGAAAAAA CTTCCCCCTCAACAGCTTCCTCTCCGGCAGCGGCCTCGACGACATGATCG GCGCGTGTATTTTGCTGGACCAGCAGGAGCTCATGGCCGAGCTCGCAAAC AAGCAGAGGCAGGGCCAGGATAACGCGGCAAGCCGATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5229:9414..12952-

>mRNA_L-elsbetiae_contig5229.13336.1 ID=mRNA_L-elsbetiae_contig5229.13336.1|Name=mRNA_L-elsbetiae_contig5229.13336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1752bp|location=Sequence derived from alignment at L-elsbetiae_contig5229:9414..12952- (Laminarionema elsbetiae ELsaHSoW15)
AAAAAAAAGATCCGAGAGTTGGAGGAGACGATCGAGAAGCTCGAGGCCAA
GATGAAGCTCCTCCTGCTCCCGACGGACCCGAACGACAACCGCAACGTCA
TGCTCGAGATCAGGGCCGGCACGGGCGGCGACGAGGCCGCTCTGTGGGCC
GCGGAGCTCCTGGGCGTGTACAAGAAGTACGCCCAAGAACAGAAAAAAAA
GATCCGAGAGTTGGAGGAGACGATCGAGAAGCTCGAGGCCAAGATGAAGC
TCCTCCTGCTCCCGACGGACCCGAACGACAACCGCAACGTCATGCTCGAG
ATCAGGGCCGGCACGGGCGGCGACGAGGCCGCTCTGTGGGCCGCGGAGCT
CCTGGGCGTGTACAAGAAGTACGCCCAAGAACAGGGATGGAACCTCAAGA
TTATCGACACGGCGTCGGTGGAGGCGGGAGGCTACCGCACGGTGATCGCC
GAAGTCAACGGGGAGAAGGTGTACAGCAAGCTCAAGTACGAAGCCGGCGT
GCACCGTGTACAGGGATGGAACCTCAAGATTATCGACACGGCGTCGGTGG
AGGCGGGAGGCTACCGCACGGTGATCGCCGAAGTCAACGGGGAGAAGGTG
TACAGCAAGCTCAAGTACGAAGCCGGCGTGCACCGTGTACAGCGCGTGCC
GGCGACCGAGACTCAGGGGCGCGTGCACACCAGCACGGCGACGGTGGCGA
TCATGCCGGAGGTTGACGATGTGACCGTCAACATCCGGGCCGAGGACATC
GAGATCAAGACGGCGCGCTCCGGGGGCTCGGGCGGGCAGAACGTCAACAA
GCGCGTGCCGGCGACCGAGACTCAGGGGCGCGTGCACACCAGCACGGCGA
CGGTGGCGATCATGCCGGAGGTTGACGATGTGACCGTCAACATCCGGGCC
GAGGACATCGAGATCAAGACGGCGCGCTCCGGGGGCTCGGGCGGGCAGAA
CGTCAACAAGGTCGAGTCCGCGGTGGACCTCTTCCACAAGCCCACGGGGA
TCCGCATCTTCTGCACGCAAGAGCGCAGCCAGCTCAAGAACAGGGAGGTG
GCGATGAAGCTGCTGCGCTCGAGGGTGTACGACATCGAGCTGGAGAAGCA
GCAGGCAGCGACTTCCGGCAATCGCAAGGCGCAGGTCGAGTCCGCGGTGG
ACCTCTTCCACAAGCCCACGGGGATCCGCATCTTCTGCACGCAAGAGCGC
AGCCAGCTCAAGAACAGGGAGGTGGCGATGAAGCTGCTGCGCTCGAGGGT
GTACGACATCGAGCTGGAGAAGCAGCAGGCAGCGACTTCCGGCAATCGCA
AGGCGCAGGTGGGGTCGGGGGCCCGGTCGGAGAAGATCCGAACGTACAAC
TGGAAGGACAGCCGGTGCTCGGACCACCGAATAGGAAAAAACTTCCCCCT
CAACAGCTTCCTCTCCGGCAGCGGCCTCGACGACATGATCGGCGCGTGTA
TTTTGCTGGACCAGCAGGAGCTCATGGCCGAGCTCGCAAACAAGCAGAGG
CAGGGCCAGGATAACGCGGCAAGCCGATAAGTGGGGTCGGGGGCCCGGTC
GGAGAAGATCCGAACGTACAACTGGAAGGACAGCCGGTGCTCGGACCACC
GAATAGGAAAAAACTTCCCCCTCAACAGCTTCCTCTCCGGCAGCGGCCTC
GACGACATGATCGGCGCGTGTATTTTGCTGGACCAGCAGGAGCTCATGGC
CGAGCTCGCAAACAAGCAGAGGCAGGGCCAGGATAACGCGGCAAGCCGAT
AA
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