mRNA_L-elsbetiae_contig5218.13323.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5218.13323.1
Unique NamemRNA_L-elsbetiae_contig5218.13323.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A6H5JA26_9PHAE (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA26_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 5.010e-133
Identity = 186/208 (89.42%), Postives = 203/208 (97.60%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLVQDPERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDGGGVGE 648
            I +VVVIVAMEAEA+PLIERLGLV+DP++F AAAP+KCFSGSYQGAAI+VVTNGKC+RFGVDQ+GTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVF+ST VKNHDRRIPIPGFKEFG+G+HESHPTPEM KELGFK+GVV+TGSSFDHT+ DDKMM+ENDARVKDMEAAAVAWACEQHGTPLFC+KVVTDLVDGGGVGE
Sbjct:   89 IKNVVVIVAMEAEASPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQVGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPTPEMLKELGFKQGVVSTGSSFDHTKTDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE 296          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: D8LCX1_ECTSI (PNP_UDP_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX1_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.220e-128
Identity = 178/197 (90.36%), Postives = 191/197 (96.95%), Query Frame = 1
Query:   58 AEANPLIERLGLVQDPERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDGGGVGE 648
            AEA PLIERLGLV+DP++F AAAP+KCFSGSYQGAAI+VVTNGKC+RFGVDQIGTVAAGLSTWLSVEAIKPD+VINAGTAGGFKKHDTAIGDVF+ST VKNHDRRIPIPGFKEFG+G+HESHP PEM KELGFK+GVVTTGSSFDHTE DDKMM+ENDARVKDMEAAAVAWACEQHGTPLFC+KVVTDLVDGGGVGE
Sbjct:   18 AEACPLIERLGLVEDPDKFPAAAPSKCFSGSYQGAAINVVTNGKCSRFGVDQIGTVAAGLSTWLSVEAIKPDIVINAGTAGGFKKHDTAIGDVFISTSVKNHDRRIPIPGFKEFGIGNHESHPAPEMLKELGFKQGVVTTGSSFDHTETDDKMMEENDARVKDMEAAAVAWACEQHGTPLFCIKVVTDLVDGGGVGE 214          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A835YY09_9STRA (Nucleoside phosphorylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY09_9STRA)

HSP 1 Score: 237 bits (605), Expect = 6.410e-76
Identity = 120/195 (61.54%), Postives = 141/195 (72.31%), Query Frame = 1
Query:   52 MEAEANPLIERLGLVQDPERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHG-TPLFCVKVVTDLVDG 633
            MEAEA PLI+ L L  D   F A+AP KC++    G  + VVTNGKC R GVD +GTVA GL+ WLS+E  KPDLVINAGTAGGF +   AIGDVFVS+R  NHDRRI IPG+ E+GVG  ++ PT ++   LG+K GVVTT +S D  E D K M  N+A VKDME AAVAWACEQH  TP FC+KVVTD+VDG
Sbjct:    1 MEAEAQPLIDHLKLELDEAAFPASAPCKCYTSERNGYTMHVVTNGKCRRHGVDHVGTVAGGLAAWLSIEKFKPDLVINAGTAGGFNRMGAAIGDVFVSSRTVNHDRRIAIPGWTEWGVGKTDAVPTEQLRGALGYKHGVVTTSNSLDFIEEDAKHMLANEASVKDMEGAAVAWACEQHNNTPFFCIKVVTDIVDG 195          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: W7TST5_9STRA (Nucleoside phosphorylase domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TST5_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.290e-71
Identity = 113/208 (54.33%), Postives = 148/208 (71.15%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLVQDPERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDGGGVGE 648
            I S+V+ +AME EA PLI +LGL Q    F  AAP  CF+G+Y    +++VTNGK  +FG D +GTV A L+T+L+VE +KPDL+INAGTAGGF+    AIGDV +S+ + NHDRR+ +P F ++GV +H++  TP + + L FK GVV+TG+S DH E DD +M  NDA VKDMEAAAVAWA E +  P F +KVVTD+VDG    E
Sbjct:   30 IKSIVITIAMEGEAMPLITKLGLTQQSNYFGHAAPFHCFTGTYNNYNLAIVTNGKDRKFGCDNVGTVPAALATYLAVEQLKPDLLINAGTAGGFESKGMAIGDVLISSTIHNHDRRMLLPIFVDYGVHNHKAVETPRLREALKFKLGVVSTGNSLDHVEADDALMAANDASVKDMEAAAVAWAAELYSVPYFALKVVTDIVDGAHATE 237          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A7S0S4A1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4A1_9CHLO)

HSP 1 Score: 226 bits (576), Expect = 3.920e-71
Identity = 115/205 (56.10%), Postives = 147/205 (71.71%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLVQD-PERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDGG 636
            + +V+++ AMEAEA PLI RLGLV+D P +    AP   +SGS    A+ VV NG+C   GVD +GTV A LST+L+V+A KPDLVI+AGTAGGFK    +IGD+FVST V NHDRRIP+P F ++G+G   + PTP M   LG K GVVT+G+S D+T+    +M E++A VK+MEAAA+AW     GTPL CVK VTD+VDGG
Sbjct:   20 VKTVLLVFAMEAEAQPLITRLGLVKDDPPKVLQPAPCVTYSGSLGSLAVHVVWNGRCGTHGVDNVGTVPAALSTYLAVQAFKPDLVISAGTAGGFKSQGASIGDIFVSTHVVNHDRRIPLPSFDQYGLGKASTLPTPNMVTSLGLKTGVVTSGNSLDYTDKCMDIMKEHEAAVKEMEAAAIAWVTALFGTPLVCVKAVTDIVDGG 224          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A1D1ZX64_AUXPR (PNP_UDP_1 domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D1ZX64_AUXPR)

HSP 1 Score: 222 bits (566), Expect = 2.170e-69
Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLVQD-PERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDG 633
            I  ++V++AMEAEA PLI+ LGLVQD P      AP   FSGS+ GA + VV NGKC + GVD +GTV A L+ +L+++A  PDLVI+ GTAGGF     AIGDVF+ST   NHDRRIPIPGF ++G+G H + PTP++   LG K G+V++G+S D+ E D ++M E+D  VK+MEAAA+AW+    G P+F VK +TD+VDG
Sbjct:   37 IKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDIVDG 240          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A6S9GE08_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GE08_HETAK)

HSP 1 Score: 220 bits (560), Expect = 9.140e-69
Identity = 112/203 (55.17%), Postives = 140/203 (68.97%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLVQDPERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDG 633
            IN ++VI+AM+AEA PLI+ LGL +    FS   PAKCFSG   G  + VV NG+  +FG D +GTV A L+T+  ++ + PDL+INAGTAGGF++    IGD+F+ST  KNHDRRI IP F E+  G +E   T  M KELGFK G+VTTG+S DH   DD++M ENDA VKDMEAAA+A       TP F VK VTD+VDG
Sbjct:   16 INRIMVIIAMQAEAQPLIDCLGLTEQSSVFSGPLPAKCFSGLVDGCNVDVVVNGQDPKFGNDSVGTVCAALTTYEGLKTLSPDLLINAGTAGGFRRKGAEIGDIFLSTECKNHDRRIAIPSFTEWATGAYECVSTANMQKELGFKCGIVTTGNSLDHEPKDDELMLENDASVKDMEAAAIASTAALFETPFFAVKSVTDIVDG 218          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A250X3R8_9CHLO (PNP_UDP_1 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X3R8_9CHLO)

HSP 1 Score: 218 bits (554), Expect = 5.580e-68
Identity = 110/210 (52.38%), Postives = 146/210 (69.52%), Query Frame = 1
Query:   10 TAASSINSVVVIVAMEAEANPLIERLGLVQD-PERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDGG 636
            TA S I  V+++ AMEAEANPLI +L L +D P+  S  AP   +SG      + V  NGKCA   VD +GTV A L+ +L+++A+ PDLVI+AGTAGGFK    AIGD FV T V NHDRRIPIPGF ++G+G+ +S PTP +   LGFK GV+++G+S D+T+   ++M  + A VK+MEAAA+AW C  +  PL CVK +TD+VDGG
Sbjct:    2 TATSPIKRVLLLFAMEAEANPLISKLSLKKDDPQMVSGPAPCVTYSGIVGDLQVHVAWNGKCAVNSVDNVGTVPASLTAYLTIQALDPDLVISAGTAGGFKAQGAAIGDTFVGTSVVNHDRRIPIPGFDKYGIGELQSPPTPGLQTALGFKSGVISSGNSLDYTDKCLEIMGSHKAAVKEMEAAAIAWVCNLYSKPLICVKSITDIVDGG 211          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A7S2V4K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4K5_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.180e-67
Identity = 117/217 (53.92%), Postives = 142/217 (65.44%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLV--------------QDPERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDLVDG 633
            I +V+V +AMEAEA PL+E LGL               Q     S   PA  + G      I VVTNGK  ++GVD +GTV AGL T+LS+ AI PD+VINAGT GGF      +GDVF+S+  KNHDRRI IPGF E+G+GD+ + PTP + KELG+K GVVTTG+S DH   DD++M  NDA VKDME AA+A   E + TP F VKVVTDLVDG
Sbjct:   18 IKTVLVNIAMEAEAAPLVEHLGLTKCECNGDESNGDGGQSANILSGPMPAVVYEGEVNECKIFVVTNGKDPKYGVDNVGTVCAGLVTYLSLLAISPDIVINAGTCGGFISKGAQVGDVFISSAFKNHDRRIAIPGFSEWGIGDYAAVPTPNLVKELGYKTGVVTTGNSLDHVPKDDEIMAANDASVKDMEGAAIAAVAEMYNTPCFGVKVVTDLVDG 234          
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Match: A0A087SFB9_AUXPR (5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SFB9_AUXPR)

HSP 1 Score: 216 bits (550), Expect = 4.460e-67
Identity = 107/201 (53.23%), Postives = 143/201 (71.14%), Query Frame = 1
Query:   25 INSVVVIVAMEAEANPLIERLGLVQD-PERFSAAAPAKCFSGSYQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAGGFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKELGFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLFCVKVVTDL 624
            I  ++V++AMEAEA PLI+ LGLVQD P      AP   FSGS+ GA + VV NGKC + GVD +GTV A L+ +L+++A  PDLVI+ GTAGGF     AIGDVF+ST   NHDRRIPIPGF ++G+G H + PTP++   LG K G+V++G+S D+ E D ++M E+D  VK+MEAAA+AW+    G P+F VK +TD+
Sbjct:   37 IKRILVLIAMEAEAAPLIQALGLVQDTPRVIPEPAPCVSFSGSHAGAHVHVVVNGKCGKHGVDNVGTVPAALTAYLALQAFDPDLVISTGTAGGFGAQGAAIGDVFLSTATVNHDRRIPIPGFDQYGLGLHAALPTPQLQAALGLKAGLVSSGNSLDYVERDMEIMREHDTSVKEMEAAAIAWSASLFGVPMFSVKAITDI 237          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5218.13323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA26_9PHAE5.010e-13389.42PNP_UDP_1 domain-containing protein n=1 Tax=Ectoca... [more]
D8LCX1_ECTSI1.220e-12890.36PNP_UDP_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YY09_9STRA6.410e-7661.54Nucleoside phosphorylase domain-containing protein... [more]
W7TST5_9STRA1.290e-7154.33Nucleoside phosphorylase domain protein n=1 Tax=Na... [more]
A0A7S0S4A1_9CHLO3.920e-7156.10Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A1D1ZX64_AUXPR2.170e-6953.92PNP_UDP_1 domain-containing protein n=1 Tax=Auxeno... [more]
A0A6S9GE08_HETAK9.140e-6955.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A250X3R8_9CHLO5.580e-6852.38PNP_UDP_1 domain-containing protein n=1 Tax=Chlamy... [more]
A0A7S2V4K5_9STRA1.180e-6753.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A087SFB9_AUXPR4.460e-6753.235'-methylthioadenosine/S-adenosylhomocysteine nucl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5218contigL-elsbetiae_contig5218:2078..10684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.2
Seed ortholog evalue8e-101
Seed eggNOG ortholog2880.D8LCX1
KEGG rclassRC00063,RC00318
KEGG koko:K01244
KEGG ReactionR01401
KEGG Pathwayko00270,ko01100,map00270,map01100
KEGG ModuleM00034
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008477,GO:0008652,GO:0008930,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009888,GO:0009987,GO:0010087,GO:0016020,GO:0016053,GO:0016787,GO:0016798,GO:0016799,GO:0017144,GO:0019509,GO:0019752,GO:0032502,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0048856,GO:0071265,GO:0071267,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.methylthioadenosine nucleosidase activity
EggNOG OGs28MG5@1,2QTZK@2759
EC3.2.2.16
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionNucleoside phosphorylase domain
Ec32 orthologEc-07_007230.1
Exons5
Model size651
Cds size651
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5218.13323.1prot_L-elsbetiae_contig5218.13323.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5218 2078..10684 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816535.904351-CDS-L-elsbetiae_contig5218:2077..21351622816535.904351-CDS-L-elsbetiae_contig5218:2077..2135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 2078..2135 +
1691683630.2610104-CDS-L-elsbetiae_contig5218:2077..21351691683630.2610104-CDS-L-elsbetiae_contig5218:2077..2135Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 2078..2135 +
1622816535.9210877-CDS-L-elsbetiae_contig5218:4517..47171622816535.9210877-CDS-L-elsbetiae_contig5218:4517..4717Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 4518..4717 +
1691683630.2732027-CDS-L-elsbetiae_contig5218:4517..47171691683630.2732027-CDS-L-elsbetiae_contig5218:4517..4717Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 4518..4717 +
1622816535.9378808-CDS-L-elsbetiae_contig5218:7171..72841622816535.9378808-CDS-L-elsbetiae_contig5218:7171..7284Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 7172..7284 +
1691683630.2816875-CDS-L-elsbetiae_contig5218:7171..72841691683630.2816875-CDS-L-elsbetiae_contig5218:7171..7284Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 7172..7284 +
1622816535.9507484-CDS-L-elsbetiae_contig5218:8536..86941622816535.9507484-CDS-L-elsbetiae_contig5218:8536..8694Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 8537..8694 +
1691683630.2910314-CDS-L-elsbetiae_contig5218:8536..86941691683630.2910314-CDS-L-elsbetiae_contig5218:8536..8694Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 8537..8694 +
1622816535.9647927-CDS-L-elsbetiae_contig5218:10562..106841622816535.9647927-CDS-L-elsbetiae_contig5218:10562..10684Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 10563..10684 +
1691683630.303956-CDS-L-elsbetiae_contig5218:10562..106841691683630.303956-CDS-L-elsbetiae_contig5218:10562..10684Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5218 10563..10684 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5218.13323.1

>prot_L-elsbetiae_contig5218.13323.1 ID=prot_L-elsbetiae_contig5218.13323.1|Name=mRNA_L-elsbetiae_contig5218.13323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MSDTAASSINSVVVIVAMEAEANPLIERLGLVQDPERFSAAAPAKCFSGS
YQGAAISVVTNGKCARFGVDQIGTVAAGLSTWLSVEAIKPDLVINAGTAG
GFKKHDTAIGDVFVSTRVKNHDRRIPIPGFKEFGVGDHESHPTPEMHKEL
GFKEGVVTTGSSFDHTEMDDKMMDENDARVKDMEAAAVAWACEQHGTPLF
CVKVVTDLVDGGGVGEV
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mRNA from alignment at L-elsbetiae_contig5218:2078..10684+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5218.13323.1 ID=mRNA_L-elsbetiae_contig5218.13323.1|Name=mRNA_L-elsbetiae_contig5218.13323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8607bp|location=Sequence derived from alignment at L-elsbetiae_contig5218:2078..10684+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGACACTGCTGCTTCTTCGATCAACAGCGTTGTGGTCATCGTGGC AATGGAAGGTATGTGTGCGTATGAGACTTGCACAGCTTCCCGGAGCACCA GCCGTGATGGTACGAAGGGTGATGATGGGGACCGTGGGAGCGTAGCTTTG TTTTCGACTCCCGCAAAGACCACACACCCGGCGCGAAAAGCACCTGCCGT TGTGAACATGTCGACAGACCGGCTGTGCAGCCGGCGTAGATGCTGCCGTG GCACCATACAGCGGTAGTCTAGCAGTCGAGCACACAACCGCCTACTTTTT TAACGCTTCCAGCGCGACGATGCTTCTTTTTCGGTGTATCCTGCTGCAAA ATATGCAAATTTTAGCGAGATACACCGGATCATGCCATCCAAACAGAGCT ATCCCCGTGCGCCTGGTGTACAAACGCATGTTCACTACATAGGCTACAGC AGCAGTGGGGGTATGTAACCTAATATCACGATATCTGACCCTTTACAAAT AGGCCACTGACATAAGCGTTTGCCTCTCTCCCGAGCGCTCACAGCGAAGC AGGGAAACTCGCGCCTCTCAAATCAATATGTTATGTGTTGCCTCTCTCAG CGAGCACGCCGCCACCTCCGCCGGACTCCTCCTTGCACAACGTCAGCGAC GAGAGTCTTTCCAACACAGACCCGTTGCCGCGGGATCAGTTCAGATGTGT TCGGGCCAGGCGACCAACGATGAGCTACGCCTGACAACTGATGTTTTCCG GAGTTGACTGTCGGCGTCGTGGTTGACAGTCCCGCAGTCCTAAAGGATCA ACGGTCTCAGTTTTGAGGTGTTTGGCCGCGAACTATGTAGCACTATGAGT CGTGTGTATTTACGAGATAACCACCTCCTCAGCCAAAAGACGATGAAATA GGTTTGTTGTTGTTTTACTGGTTTTAATTAATGCATACAAATGTCAGCAG TCTACGTCCAGTCTGTGAAAAAGTCGTTCCAGAGGGACTACTGTTGTAGG AAATAACCCCCTGGGTGTGATTTGCCGCGAATACTTCCTCACACCAGCCC GGACGATGAGATTTGGCTCGAGATCATACGTGAAAACTCTGTACAACCTA GTCTTATGTGTGTTTGCACAGCAGGGGTGTGGGAGAAAGCGCGAGACAGA GTGGGCGGGAACCAATAACACTCGCCCTTCTTGCCGCACCGTGTGTGTGT GTCCTTCCCATTTATTTTGGCGACAGTCCCCCCAAGTGGAGACGTGTACT ACACCTTGCGGTGTGTTTAGAGGTATGTGCTACACTTTACAGTGCATTTG TCTGTACAACTAGAACCAACCGGGGTCACACACAGGAGGAGGTGAACACT GGGGCTTTTTCTTCTTTTTTTATTTTTTTATTTCTTTGCCCCGCCTTCCT CCTGCGGTGCTTGCCTTCATTTTATCGCGAGAAGGGTTCTCAGCTGTCCC TTTCCCTCGTCAACGTGTTTACGTCGAAGTTTGGTACTCACGAGCTTTTC AGCTTTTATCGCTTGGATGCGATTTTCCGCACACCCGCCGCCCTGGGCCG ACCCTTAAAGCTCGATTGCTCCACAAACAAGAACACGGTGTTAGAAAGTG CCGAATACCGTAGGTGACACAAGATACCACACCCCCTGGACCGAATTTTA GAGCTCCACTACTACGCAACGACGAGGGGTGCCAGCACCAAACGGCACAT TTTCGGACAGCCCTTGACTAGATCTTTCCAACGCCGCCCTTTTTGGCACT GGCACTCTTCTGGCCGGGGAGGAATCGAGCTTTGAAAATCTGTCCAGGGG GTGTGGTATATTGTGTCACCTACGGTAGGGTGGCGTTTGGACAAATATCT CGTCGATACAAAGCTGTCCGAAAACTTGTCGTTTGATATGGGCACCTTCT TCGTTGCAGACTACATGTATGTGCATGTACTACATACATATACCCTAGGT GACACAAGGTACCACACCCCCTGGACCGAATTTCAGAGCTCCACTATTTA CTCCGTAACGAAGGTTGTTTTTCTGCTCGCTTCGCCAAATATTACGTCAC TGTTGTATGGAATACCGTTTGAACCCCATATCGAGTCCTTGTTCTAGTGT GGGGTAGGTTCCATCTTTGATTCATTGCTTATTTTTAAGAAGGTGCCAGC ACCGAACGACACATTTCGGGACAGCTCTCGACTAGATCTTCCCAACGCCA GCCACCCTCTTTCGGCACTGGCACTCTTCTTGCTGGGGAGGGAAGGATCG AGCTTTGAAAATATGTATGTCCAGGGGGTGGGTGGTGGTATCTTCTGTCA CCAACGGTATTTGCTGCTGCACTGCTGTTGCTGTCCCGCCGCCTGCACAA CCTCCGCGCCCAGCTCACGACCGCCCAGCTCACGACCCCCGGCAAACCGT CTATACCTCCATCATCGCTGTCTCCGCTTTTAACACACAGCGGAGGCCAA CCCCTTGATCGAGCGCCTGGGGCTGGTCCAAGACCCCGAGAGGTTCTCCG CCGCCGCGCCGGCCAAGTGCTTCAGCGGCTCCTACCAGGGCGCCGCGATA AGCGTGGTGACGAACGGGAAGTGCGCGCGGTTCGGCGTCGACCAGATCGG CACCGTGGCCGCCGGGCTGTCGACCTGGCTCTCCGTGGAGGTGACACGAC GAGAGCAGCAAGCAAAGGGCGGTCGCCGTGTGCGACTCACTCGATCGCCC CGTGTTTTTATGCCGCGCGCGCTGTTTGTGTGCCCCCCAGAAGGATAGAA ATGTAATATTGTACTTGCCTGCAGAGCTAGATTTGTACTTCTTACGTATG TAGAAGCAAGGCACGTTTGGCGCATGTTTTTTTTTTTTTTTTCTCTCCCA TTATTGGCTTGTTCGTCGTCGTCTGCCCCACTGGCCCCCGTCTTCTCCAC TTTGCGACGAGCTAGACGACCCAACCGGGGTCACACAGGTGTATGTATGC ATGTATGTATGTATGCATGTGTGTGTGTGCATGGACATACACTTGCGAGT CGAGGTCGTGTGCTTTTCTTTTGGGCCGGGCAGGCAGGCAGGCAAGCAGG CAGAGGCGTGAGTGAGTGAGTAAGTGAGATCGCGAGGTCGACTTTGAACT TCCCTGTCCGCGCTGGAGTACAGACACCACGCGACACACGAGAGAAAACG CAAACAATACACACACGCACACACACACACACACGCACGCGCAAATGGCG AAGGCAAGCGTGTGAGACGTAACGACGGCATCTGCTCGCACACGCCGCAA AGATCGTTACAAAACACGCAAGCAAGCAGGCATGAACAACACTCGGAAGC GGAGAGTGAGCGAGCGTATGTAGGGAAACATGGTGCCCCCGCTGAGGAGC AAGCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACGATGA GCTATGTGTTTTGAAAGCTAAATATGTAAGTATTTTCTGGGTCGGCGAAG CAAGTTATATGCCGGCGGAAGACTCACGCTGCTGTAGTTTTTCAGCACGG TGTTTCGTGGCCTCTCAGCGCGAGCATCTTGGGCGGCACCGGACGATATT TCACTTGGAGCAGGTTCTCGGAAGGAAGCAAAGTTTGAAAAACGGGAACC TACTACTGCTGTAATAGATACATAACTTGTTTGGCACTGCTTTTTCGGAC GACTGCGCTTGCTGCACCACACGTTTAGACAGGAACTGAAGGTTTTCGCG CTTGCTGTAGCCCGCTCTCGATCCCGTGTACGCTGGTTCTTCTCTTTTTG GAACGGAACCCTCTCACCCATACGTACATACATATGTACATACGTGCGTT TGTTTTGCTTTTTAAAAAATAAACAATGAATCAAAGATGGAACCTAACCC ACACTTAGAGCAAAGGACTCGATGTATGGGATTCAAACGGTATTCCATAC AGATAAGTGACGTAATATTTGGCGAAGCGAGCTTTTTCTTAATCGGCGTC GAGTGCGCTCCCTTAAGTGTTTTTGTGACCACGGGGACCCCATGGATGTT TTTGGACTAGATGGAGAGCTAATGGGAAAAACAAAAAAACAACAACAGCA GCAACAACAACAACAACAACAACAACAGCAACAGCATACGAGGCGGTAAC CTGGCCGCAGCACGTAGTTGTTGTAGCTTGTGCCTCTAGGCGTAGGGAAG CTCAGGCCTCTCTTTTGTGGGACGACCCGCGTGTCTGGTTGGCGATTCTG CGGACATTTTGCAGCCGTGCGCGCGCGACTCGCGCACGCGCGCCGGTCCA GTTAGCGCTCGTGTATATACATAACACAAGAGCCAATCACTGACTGCTGC TGCGTTGGCACCGGAGGATGTCCGTCCACAGACGAAAATAAACACACTTC TTTCTGGTTTCTTCCTTCAAAAAGCTTTGGTTGTGTGTTTTGCGCACCCG TGTCCCCGTGTATCTTCGCCGCGTACCCCGCCCGCTCTGCTCGTTGCCTC TCTCACGGGCGCGGTTGGGTTTGTTTGCTGGGTGCTACAAACATGCATAT TTTACGGGTGTACCGCTTGCCTTTTGGCCGTTGTAGGCCTTTGTCCACCC CCCCTGGTATTTTGCTATTTGGCTCTCGGGCCTCGGCCTTCTGGCCTTTT TCTGCCTCTTTTGGTGTGGTGAGCCTTCGGCTCCCCGTCAATAGCTCTCC TTCCTCACCTGGCGTGGTATTTGGTTTGCTTTTTGGAACTTTCTTTCATG TTATCTTCCTTGCTTTTTTGAACATTCTATGTTTGTCGTATGTGTAGTAT TGTAGGTACATACATCTACGTATCTTTGATTTCGTTGTTGGCGAGACGCA AGACCCCTCGGGGTCCGGTTCAGTACCGCCGGGCGTGTACGTACCACATT TTCATTTTGTGTTGGCGAGATGCAAGACCCCTCGGGGTCCGGTTCAGTAC CGCCGGGCGCGCGTATGTACCACATTTTCTCTTTTTATTTTTCTTCCGCG GCGTCGAGTGGTGTGCCCCCTTAAGTGTTTTGTGCCCACGGGGCCCCCGG GGATGTTTTGGACTAGAGAGCTAATGTGAGAAACAACAACTACAACAACA ACAACAACAACAACATTGTACATGTCATCTCCGTCTGGCCCCAGGCGATC AAGCCCGACCTGGTGATCAACGCGGGAACCGCTGGTGGGTTTAAGAAGCA CGACACGGCGATCGGCGACGTTTTCGTGAGCACGAGGGTAAAGAACCACG ACAGAAGGTGCGGCTTTGTATGCATGTACGTACATTTTAAGACACAGACA GACAGCGCACGGATAAATAAGACAGCAGCGCACAACCCCCCCCCCCCCCT AGTGCCCGTCGTGGTCGGTTATTGCGGCGGGTTTTGTTTTTTTGGCGCAT TTTTGCTGATGGTGTGTCGTGTTGGCGCTGGTTTTTACTTACCCGGCGCG GCGGAGGAGATGAAGGGATTATTGTAGCGGATGAAAGGGGGCAGGACAAG TCAGTGTTGGTGTACCATCAGCAGCCTCAACACCACCGCAACCACCGCAA CCACCACAATCGCCAGAAAGATATATATCGTCCAACACAGCGCGCTTCCC TCGGTCACCTCCACACCGGGATTGACTTGCTGCACCCCCCTCCTTCGTTG CGGCCAAGGGGAGCATGCGGATTGTAATACCCCAACACCTAAATATGCCG ACAAACTGATTTAAGCCAAAACCCGAGGGGAGAGGTGTAGGGGGGGCGTA CTAGATTCTACTTCGAAGTATGTATTGTTTTCGGGGGGACTGCAGCCTAG ATTGTAAGAGGGCGCCGCGTGGGGGATTTAACCCCCCTGGGTCTCTCCCA CACTAAGTATTATATAAAAAACAAACTGTATTTAGCCCATAAACATCAAA ACGGGGGGGGGGGGTGCGGCGGCATAGGTGTTGGGTATGCAACCCGCATG CCCCCTTGACTGCGGTACGAAGGCCCCGTACGAAGCAACATTACCAATCC CCCCCCCCCCCCGCCCCCTGCCCATCCGCCGGGCCGGTGAAACCCGAGAG TACATCTCCCCTTCCTGGCGTCAGGAATGCCGAGATCCGACGACATACCC CTTCTCCCCGCTGCCCCATGGTGCACGTCGCCCCTCCCTCCCTCCCTCAA GGGGTCACCAGGATTGCAGGGCTGGAAGCACACCCCAAACTTACATATGG CCGATTTCGGGGAGGGGGGGGGGGGGGTATACTAAAACCTATATAAAAGA AAGGGGACCCTCAGCTGGTATTATTAAGGGGGCGATTTTAGCCGGGGGTA TATGCCCCCGAACGGTCCCTCCTATACTTAAATCCTAGTATATGTTTCCC AAACCTCGGTAGGGCCAAAAAAGAGGGAGGAAGGGGGGGGGGGGGGGGGG GGGTATGCTTCCAGGATTGTCACCTGGGTGACCCCTTGCCTCCCCCCCTC CGGCGTGTTTTGTTTTTGTGTGCCTTTTTTGTGTGCCTTTTTTATGTATG TATCGAAAGGATCCCGATCCCAGGGTTCAAAGAGTTCGGCGTCGGGGACC ACGAGTCCCACCCCACGCCGGAGATGCACAAGGAGCTGGGGTTCAAGGAA GGCGTGGTGACCACCGGGAGCTCGTTCGACCACACCGAGATGGACGACAA GATGATGGACGAGAACGGTGAGCAGTGGCGTGGTTTCTCTCAAGAGCAGT ACGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGACTTTGACATATAGAG AGAGAGAGGGGGAGTNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGTGG TGGGGAGGGGGGGGTGTTTTTTTTTTTTTTTTTTTTCTTGAGACAGAGAC AGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAG AGAGAGAGAAATAATGATCGATTGGAGTTGGCGCTCTGAGGGGGGGGTGC ACACTGACTTGGTGTGTCGCCCGCGGAAAGAAAAGTGGCTGTCTTGTCTT TTGTCTCGAGTTCCGCGTCGGGAGGGAATGCCCGCTGGGTTGGTCGGGGC GGGCGGGGGCGGGGGGGTATCGTGAATCATCGGAGGCGTCGTGGATCATG AGGGGGGTGCCAGACTGGTCGAACGATAGGCTGCTCGATGCGTCCGCGCG GCTGTTATCCACGTATGTACAAGTAGAAAAAGTATATAACTGAGGGGGGG GGGGGCAGGATTGGACCGGAACAGAGGAAGCAACTTCGACCTCACCGTCG ACGAGGGAAAGGGACGGCTGAACCCTTCTCGCGACATAAAACTTAGGCAA GCACCGCAGAAGTGGGGAGTGGCGGCCGACCTCGGGGAAAAAAGGAACCC TTTTGTGTGACCACGGTTCAGTACTCTGGCAAGATGCCGCGCCCTCGTGG CGAGGAGCCCAGATCGAGCACTGGAAATAAATGTGAAGAGTAAAATAATA TAAATCGCTGTGTAGAGGAGAGGGCGTGGATGGGAGTGAGAAGCGGTGGG TGCAAGCTAGCAGCAGCCGGCCGTTGTAGGCACTACCAACAGCAATCAGT CGCGCCGTCGGAGGGCGCAGGCAGCACTTTGTTTTCCAAGTTCCTCCCCC CGGCCTATTTTCACACATCTTTTTTGAGGCGACTCACATTCATCTCGGCC ACTTGCATGCATACTTATTCGTCGTGGGGGTTTCATGACTGCTGAGAGCG AGGGTGTTCCTCACGGCTCCGGCGGCGTTCTGTTTTCACACGTCTTCCTT GAGGCGACTGACATTCATCTCGGCCACTTGCATACATACGTATTCATCGT GGGGGTTTCATGACTGCTGAGAACGAGGGTGTTCCTCACGGCTCCGGCGG CGTTCTGTTGCGGAGGCGTCAATAGGCACTGCTGTTGCTGACGGTTGTTA CCGTTCTTGTGTTCACGCTAAAAAACGGCGGAGTAGATTTAACACAGGAG GGTCGCTCGCGGTTTCATGTTTTCACGCTGTATGTACTCTGCCTCTTTTT TATTATTATTTTTTTTTATTATTATTATTACTATTTTCTCCTCCCATTAT TGGCTTATTCGTCGTCTGCCCCACTGGCCCCCTTCCTCCACCACGACTGG CTAGACGACCTTCTGTTGCTGCGTGTTTTAGCGCGAGTTGTGTGCATGCG ATCTTGCGTGGACGGTGCAAGTCGCGTCCGTTGAACGTGAGACCCACCAG TCGCATTTTCCTGCCGCGCCGTCGGTTATTTTGGCGCAGGTTCTCCCTTG AGGTGGTCTCGCTCGCTCTATTTACGTTTATGTCTGGGAGGGGATGGACA GAGGGGCAGACTTATGGCTTGGGTCGTCGTAGATAAATGCAGCTATGTAG CGATGGGGGGGGGGTGAATGGAGTGCGGGCAGAAATAACCGAGCGGGGCA GAAAATGCGACAACAGTTGTAGTCTGTATGCCGGATACAACTCAACCAAA GGGCTAACGGCTGTGTCCCCCCCCCCCCCCCCCCCCCGTCGGTGTCGGAC AAATGAATTGATTTGATTTGATTTGATGGATACAGACGCGAGAGTGAAGG ACATGGAAGCGGCGGCGGTTGCTTGGGCTTGCGAGCAGCACGGGACCCCG CTCTTCTGCGTCAAGGTGGTGACGGATCTCGTGGACGGCGGAGGGGTGGG CGAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5218:2078..10684+

>mRNA_L-elsbetiae_contig5218.13323.1 ID=mRNA_L-elsbetiae_contig5218.13323.1|Name=mRNA_L-elsbetiae_contig5218.13323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1302bp|location=Sequence derived from alignment at L-elsbetiae_contig5218:2078..10684+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGACACTGCTGCTTCTTCGATCAACAGCGTTGTGGTCATCGTGGC
AATGGAAGATGTCCGACACTGCTGCTTCTTCGATCAACAGCGTTGTGGTC
ATCGTGGCAATGGAAGCGGAGGCCAACCCCTTGATCGAGCGCCTGGGGCT
GGTCCAAGACCCCGAGAGGTTCTCCGCCGCCGCGCCGGCCAAGTGCTTCA
GCGGCTCCTACCAGGGCGCCGCGATAAGCGTGGTGACGAACGGGAAGTGC
GCGCGGTTCGGCGTCGACCAGATCGGCACCGTGGCCGCCGGGCTGTCGAC
CTGGCTCTCCGTGGAGCGGAGGCCAACCCCTTGATCGAGCGCCTGGGGCT
GGTCCAAGACCCCGAGAGGTTCTCCGCCGCCGCGCCGGCCAAGTGCTTCA
GCGGCTCCTACCAGGGCGCCGCGATAAGCGTGGTGACGAACGGGAAGTGC
GCGCGGTTCGGCGTCGACCAGATCGGCACCGTGGCCGCCGGGCTGTCGAC
CTGGCTCTCCGTGGAGGCGATCAAGCCCGACCTGGTGATCAACGCGGGAA
CCGCTGGTGGGTTTAAGAAGCACGACACGGCGATCGGCGACGTTTTCGTG
AGCACGAGGGTAAAGAACCACGACAGAAGGCGATCAAGCCCGACCTGGTG
ATCAACGCGGGAACCGCTGGTGGGTTTAAGAAGCACGACACGGCGATCGG
CGACGTTTTCGTGAGCACGAGGGTAAAGAACCACGACAGAAGGATCCCGA
TCCCAGGGTTCAAAGAGTTCGGCGTCGGGGACCACGAGTCCCACCCCACG
CCGGAGATGCACAAGGAGCTGGGGTTCAAGGAAGGCGTGGTGACCACCGG
GAGCTCGTTCGACCACACCGAGATGGACGACAAGATGATGGACGAGAACG
GATCCCGATCCCAGGGTTCAAAGAGTTCGGCGTCGGGGACCACGAGTCCC
ACCCCACGCCGGAGATGCACAAGGAGCTGGGGTTCAAGGAAGGCGTGGTG
ACCACCGGGAGCTCGTTCGACCACACCGAGATGGACGACAAGATGATGGA
CGAGAACGACGCGAGAGTGAAGGACATGGAAGCGGCGGCGGTTGCTTGGG
CTTGCGAGCAGCACGGGACCCCGCTCTTCTGCGTCAAGGTGGTGACGGAT
CTCGTGGACGGCGGAGGGGTGGGCGAGGTGACGCGAGAGTGAAGGACATG
GAAGCGGCGGCGGTTGCTTGGGCTTGCGAGCAGCACGGGACCCCGCTCTT
CTGCGTCAAGGTGGTGACGGATCTCGTGGACGGCGGAGGGGTGGGCGAGG
TG
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