mRNA_L-elsbetiae_contig5116.13177.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: D7FRH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6_ECTSI) HSP 1 Score: 411 bits (1057), Expect = 2.930e-138 Identity = 199/276 (72.10%), Postives = 229/276 (82.97%), Query Frame = 2 Query: 293 LVPRICKRYEGYAAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAPGAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGKVAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHYEHTPWTND-GYTVAPSINGY 1117 ++ ICK +E YA VAD G GKIVGVSFVDVHAKGSRVA LGPVSSIAPGAGKK+FVAACA+AE+LGFSTL+LMQIA NSRSFSLYAKLGFE KHTCQY+GGFL GV+LK+MVA D+ ECA++FL AHG+GCGWDRRADITG L+SG PFPMLVARDADGKV GYTTGF+++GHTVA +QD+FC MF ESS+LHQQ GLPCPRFHCPVEFT LLSW+LAQ+GL+IFRA+++MARGHYEHTPW + G VAPS +G+ Sbjct: 57 IIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYMGGFLEPPSEGSLSPPPAPS-----GVTLKAMVAGDVEECAEMFLEAHGKGCGWDRRADITGCLESGAPFPMLVARDADGKVVGYTTGFYLMGHTVAKSQDIFCDMFRESSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLRIFRATIVMARGHYEHTPWQDAIGNVVAPSASGH 327
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: D7FVW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW9_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 2.870e-133 Identity = 196/283 (69.26%), Postives = 225/283 (79.51%), Query Frame = 2 Query: 272 HRSVLSLLVPRICKRYEGYAAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAPGAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGKVAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHYEHTPWTND-GYTVAPSINGY 1117 H ++ ++ ICK YEGYA V D G GKIVGVSFVDVHAKGS+VATLGPV+S+A GAGKK+FVAAC +AE+LGFSTLIL QIA NSRSFSLYAKLGFE KHT QY+GGFL GV+LK+MVA D+ ECA+LFL AHG+ CGWDRRADITG L SG PFPMLVARDA+GKV GY+TGFF+IGHTVA +QD+FC MF E S+LH+Q GLPCP+F+CPVEFT LLSW LAQ+GLK+FRAS+IMARGHYEHTPW N G+ VAPS GY Sbjct: 50 HPAIGPTVIQSICKSYEGYAVVEDGGAGKIVGVSFVDVHAKGSKVATLGPVASLASGAGKKSFVAACDYAEELGFSTLILTQIAANSRSFSLYAKLGFETKHTVQYIGGFLEQPSEGSLPLPPAPS-----GVTLKAMVAGDVEECAELFLEAHGKDCGWDRRADITGCLGSGFPFPMLVARDANGKVVGYSTGFFMIGHTVAKSQDIFCYMFREGSKLHKQAGLPCPKFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHYEHTPWPNAAGHIVAPSTTGY 327
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: D7FRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH7_ECTSI) HSP 1 Score: 150 bits (380), Expect = 1.250e-39 Identity = 77/102 (75.49%), Postives = 87/102 (85.29%), Query Frame = 2 Query: 293 LVPRICKRYEGYAAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAPGAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGG 598 ++ ICK +E YA VAD G GKIVGVSFVDVHAKGSRVA LGPVSSIAPGAGKK+FVAACA+AE+LGFSTL+LMQIA NSRSFSLYAKLGFE + + + G Sbjct: 39 IIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKGSRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFEGQASLKVTTG 140
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: A0A6H5K2U2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2U2_9PHAE) HSP 1 Score: 135 bits (339), Expect = 9.960e-35 Identity = 59/86 (68.60%), Postives = 73/86 (84.88%), Query Frame = 2 Query: 863 IGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHYEHTPWTND-GYTVAPSINGY 1117 +GHTVA + D+ C MF ESS+LHQQ GLPCPRFHC VEFT LLSW+LAQ+GLKIFRA+++MARGHYEHTPW + G+ +AP+ +GY Sbjct: 1 MGHTVAKSHDIICDMFRESSKLHQQAGLPCPRFHCRVEFTGLLSWALAQRGLKIFRATILMARGHYEHTPWQDTIGHLMAPTASGY 86
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: A0A6H5KFB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB4_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.050e-34 Identity = 101/264 (38.26%), Postives = 113/264 (42.80%), Query Frame = 2 Query: 329 AAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAPGAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGKVAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHYEHTPWTN-DGYTVAPSINGY 1117 A V D G GKIVGVSFVDVHAKGSRVATLGPV+S+A GAGK +FVAACA+AE+LGFSTL AG RS DGKV GY+TG RF+CPVEFT LLSW LAQ+GLK+FRAS+IMARGH+EHTPW N G+ VAPS GY Sbjct: 78 APVEDGGAGKIVGVSFVDVHAKGSRVATLGPVASLASGAGKNSFVAACAYAEELGFSTL-----AGGPRS-----------------------------------------------------------------------------------------------DGKVVGYSTGTI--------------------------------RFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHFEHTPWPNATGHIVAPSTTGY 209
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: A9P0X9_PICSI (N-acetyltransferase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P0X9_PICSI) HSP 1 Score: 79.3 bits (194), Expect = 1.040e-12 Identity = 71/239 (29.71%), Postives = 111/239 (46.44%), Query Frame = 2 Query: 341 DNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAP-----GAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGKVAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTE-LLSWSLAQQGLKIFRASV 1039 DN G +G +F++ G V +GPV + P GAGK A A+ +++ L+QIA N++SFSLYAKLGF+ Y G + + H G +K M D+ C++L H G +R DI L++ + +D + YTTGF + GH++A ++D F +F L ++RG H P L+ W+L ++GL++ R V Sbjct: 69 DNASGLPIGAAFLNFT--GESVQAVGPVF-VDPDWNNKGAGKALMNALIERAKATNATSIRLVQIAANTQSFSLYAKLGFQPVECISYFEGSMDENLHSGASFIP--------GFKVKMMEESDVHACSEL----HKSVLGHERETDIRELLQTNPGNSWVAVKD--DILQAYTTGFCLEGHSIAISEDAFKTLFEVV--LCEKRGCSMT-IHIPGRIHPFLIDWAL-KRGLRLVRLRV 286
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: A0A2K1JT89_PHYPA (N-acetyltransferase domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JT89_PHYPA) HSP 1 Score: 79.7 bits (195), Expect = 1.150e-12 Identity = 85/299 (28.43%), Postives = 127/299 (42.47%), Query Frame = 2 Query: 260 GLPQHRSVLSLLVPRICKRYEG--------YAAVADNGEGKIVGVSFVDVHAKGSRVAT-LGPV----SSIAPGAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGK-VAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQR--GLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHYEHTPWTNDGYTVAPSI 1108 G+P +V S P + R G Y VA + EGK+VG + H G A +GPV + G GK A HA+ L ++ L A N +SF LYA LGF + F + + V + M A DI C D++ + G+DR +I + S VA D + GYTTG F++GHT+ +++ + A+ T + R + L P + P L+ W+LA + L + R + M G Y+ NDG+ +PSI Sbjct: 39 GVPTSFNVAS---PEVASRMLGSFVSQPSCYKLVAIDSEGKVVGGVLIQ-HGSGDNSAHGVGPVFVSLDAADRGIGKTVTKAVVEHAQSLNAPSIRLNTSASNRKSFCLYASLGFMP---VECTTSFFGTVNPDDGVIAASALEISTEVVRTRKMEAADIKACGDMY----SKAMGYDREDEIRD-MHSKFSEKCWVATTKDNSTILGYTTGLFLLGHTMGSSEAAWVAVITRAIRENNGNVSSLTIPGAYYP----RLIKWALATK-LILTRHNWYMVIGMYQKP---NDGFFWSPSI 317
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: A0A6H5K5T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T0_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 3.260e-12 Identity = 39/55 (70.91%), Postives = 44/55 (80.00%), Query Frame = 2 Query: 293 LVPRICKRYEGYAAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAPGAGKKT 457 ++ ICK +E YA VAD G GKIVGV FVDVHAKGS+ A LG VSSIAPGAGKK+ Sbjct: 39 MIQSICKSHEAYAVVADGGTGKIVGVPFVDVHAKGSKEACLGAVSSIAPGAGKKS 93
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: UPI001F55A25F (GNAT family N-acetyltransferase n=2 Tax=Nostoc TaxID=1177 RepID=UPI001F55A25F) HSP 1 Score: 75.5 bits (184), Expect = 3.450e-11 Identity = 68/250 (27.20%), Postives = 115/250 (46.00%), Query Frame = 2 Query: 326 YAAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAPGA-----GKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGKVAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHY 1060 Y+ VA+ +G+++G +F+ +G +A +GP +++ P A G++ A + ++ + L+Q A NSRS SLY KLGF+ + G S G S++ M D+A C L HG DR ++ A+ G MLV + DG+V+GYT+ GH VA + A+ ++ + G F+ P+ +L W L GL++ + + +M+ G Y Sbjct: 105 YSVVAEASDGRVIGSNFLW---EGDTIAGVGP-TTVDPAAQNRSVGRRLMEDVLQRAREKRYAGVRLVQAAHNSRSLSLYTKLGFDVREPLANFEGKPLS--------------LTIPGRSVRLMTEADLAVCNQLCDRIHGH----DRAGELKAAIGRGTA--MLV--ECDGRVSGYTSEIGFFGHAVAENNEDLKALIA-AAPASAELG-----FYVPMRNADLFRWCL-NHGLRVTQTATLMSLGLY 321
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Match: UPI001FA9DD6C (GNAT family N-acetyltransferase n=1 Tax=Streptomyces sp. 891-h TaxID=2720714 RepID=UPI001FA9DD6C) HSP 1 Score: 67.4 bits (163), Expect = 6.100e-9 Identity = 65/250 (26.00%), Postives = 104/250 (41.60%), Query Frame = 2 Query: 326 YAAVADNGEGKIVGVSFVDVHAKGSRVATLGPVSSIAP-----GAGKKTFVAACAHAEKLGFSTLILMQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHXXXXXXXXXXXXXXXGVSLKSMVAEDIAECADLFLTAHGRGCGWDRRADITGALKSGIPFPMLVARDADGKVAGYTTGFFIIGHTVATTQDVFCAMFTESSRLHQQRGLPCPRFHCPVEFTELLSWSLAQQGLKIFRASVIMARGHY 1060 Y+ VA+ +G++VG +F+D S V +GP++ I P G G++ A + + LMQ ++RSFSLYA +GFE + T + G S + G +++ D+ C +L HG +DR ++ +L G + + G++ GY T H VA T A+ + P P + LL W LA GLK+ + +M G Y Sbjct: 16 YSVVAEL-DGRVVGSNFLDER---SSVVGVGPLT-IDPAVQNRGVGRRLMQDVLERATERAAPGIRLMQSGYHTRSFSLYASMGFEFRETVACMQGPAMSRE--------------VPGYTVREATEADLGRCDELCRQVHG----FDRGGEVADSLGQGTARVV----EHQGRITGYATDLAFFAHAVAETNPSLQALIASAP------SFGGPGILVPASNSALLQWGLAN-GLKVVQLLSLMTTGLY 231 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5116.13177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5116.13177.1 >prot_L-elsbetiae_contig5116.13177.1 ID=prot_L-elsbetiae_contig5116.13177.1|Name=mRNA_L-elsbetiae_contig5116.13177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=203bp MQIAGNSRSFSLYAKLGFEAKHTCQYVGGFLASSDHPPPPPESDGGVSGGback to top mRNA from alignment at L-elsbetiae_contig5116:569..4322+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5116.13177.1 ID=mRNA_L-elsbetiae_contig5116.13177.1|Name=mRNA_L-elsbetiae_contig5116.13177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3754bp|location=Sequence derived from alignment at L-elsbetiae_contig5116:569..4322+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5116:569..4322+ >mRNA_L-elsbetiae_contig5116.13177.1 ID=mRNA_L-elsbetiae_contig5116.13177.1|Name=mRNA_L-elsbetiae_contig5116.13177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1218bp|location=Sequence derived from alignment at L-elsbetiae_contig5116:569..4322+ (Laminarionema elsbetiae ELsaHSoW15)back to top |