mRNA_L-elsbetiae_contig51.13146.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A6H5JGS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS5_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 2.530e-129 Identity = 206/239 (86.19%), Postives = 222/239 (92.89%), Query Frame = 1 Query: 367 KASLQELHLAIFQGDTAKVESVVERGDLTALNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILVDYGADVTVSNYDGLTPKRLCEQYCPPRLKERMLQLLREATVAQAKANARKEQLAGEQMSIEAVYHQLAMLRSKLAATAAANTEVPASEAAEGTQTENALLTLVEANVRVVEGQRHALEEMDKTAARMERMFRRLHMRLDAVSPGDVSFS 1083 + SLQELHLAIFQGDTAKVE VV RGD AL++ADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAIL+D+GADVTV+N+DGLTP+RLCEQYCPPRLKERMLQLL+E +AQAKA ARK Q+A EQ++IEAVYHQLAMLRSKLAATAAANT++PASEAAEG Q ENALLTLVEANVRVVEGQRHALE M+KT RMERMFRRLHMRLD V PGDVSFS Sbjct: 420 RTSLQELHLAIFQGDTAKVEEVVARGDARALSEADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILIDHGADVTVANFDGLTPQRLCEQYCPPRLKERMLQLLKEGALAQAKATARKNQVAEEQVNIEAVYHQLAMLRSKLAATAAANTDIPASEAAEGAQMENALLTLVEANVRVVEGQRHALENMEKTVDRMERMFRRLHMRLDLVHPGDVSFS 658
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: D7FI34_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI34_ECTSI) HSP 1 Score: 377 bits (969), Expect = 8.020e-127 Identity = 199/239 (83.26%), Postives = 213/239 (89.12%), Query Frame = 1 Query: 367 KASLQELHLAIFQGDTAKVESVVERGDLTALNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILVDYGADVTVSNYDGLTPKRLCEQYCPPRLKERMLQLLREATVAQAKANARKEQLAGEQMSIEAVYHQLAMLRSKLAATAAANTEVPASEAAEGTQTENALLTLVEANVRVVEGQRHALEEMDKTAARMERMFRRLHMRLDAVSPGDVSFS 1083 +ASLQELHLAIFQGDTAKVE VV RGD AL++ADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAIL+D+GADVTVSN+DGLTP+RLCEQYCPPRLKERMLQLL+EA +AQAKA ARK Q+A EQ++IEAVYHQLAMLRSKLAATAAANT++PASEAAEG Q ENALLTLVEANVRVVEGQRH MFRRLHMRLD V PGDVSFS Sbjct: 47 RASLQELHLAIFQGDTAKVEEVVARGDARALSEADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILIDHGADVTVSNFDGLTPQRLCEQYCPPRLKERMLQLLKEAALAQAKATARKNQVAEEQVNIEAVYHQLAMLRSKLAATAAANTDIPASEAAEGAQMENALLTLVEANVRVVEGQRHXXXXXXXXXXXXXXMFRRLHMRLDLVHPGDVSFS 285
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A0B6Z005_9EUPU (Uncharacterized protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Z005_9EUPU) HSP 1 Score: 70.1 bits (170), Expect = 6.850e-11 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 376 LQELHLAIF---QGDTAKVESVVERGDLTALNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAV-CDSPAVLAILVDYGADVTVSNYDGLTPKRLCEQ 702 LQ+ L IF Q AK + + + D T L+ + GQ PLH+A KG V+ ++VE A+L+AVD GN V+H A+ +SP ++ +L+ GA+V+V N + P + Q Sbjct: 22 LQDSPLRIFKCAQNGNAKEVARIIKSDPTRLHARNPQGQMPLHVAASKGHLVVVEVIVEAKADLDAVDNQGNTVLHLAIIAESPDIVTLLMKSGANVSVRNNAHMMPVHVAAQ 134
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: UPI0003C1002A (ankyrin repeat domain-containing protein 10-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C1002A) HSP 1 Score: 68.2 bits (165), Expect = 2.460e-9 Identity = 34/104 (32.69%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 382 ELHLAIFQGDTAKVESVVERGDLTALNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILVDYGADVTVSNYDGLTPKRL 693 ++H +G+ K++ ++ D +++ D +G+TPL+ A YKG R LL+ GA++ + +G +HAAV P +L+ YGA+V +S+ G+TP L Sbjct: 40 DIHYEASRGNIEKLQILLRTSDKELIDRKDYYGKTPLYWAAYKGQRSSMELLLRAGADVNSQCKHGGSPLHAAVGLFPECALLLIQYGANVNLSDNWGVTPMYL 143
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A6P4ZEQ1_BRABE (LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 46-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZEQ1_BRABE) HSP 1 Score: 63.9 bits (154), Expect = 4.630e-8 Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 460 NQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILVDYGADVTVSNYDGLTPKRLCEQYCPPRLKERMLQLL 744 NQ D G+TPLHLA +G+ + R+LVE GA L AVD GN +H +C L+D G + N GLTP L + +K+++LQLL Sbjct: 25 NQRDPRGRTPLHLAACRGAEDVMRVLVEFGAELSAVDQQGNTAMH--MCGHVDTTQFLIDCGLQSDICNSHGLTPYMLAVRR---GVKKQVLQLL 114
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: C3XX62_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XX62_BRAFL) HSP 1 Score: 61.6 bits (148), Expect = 1.770e-7 Identity = 34/78 (43.59%), Postives = 43/78 (55.13%), Query Frame = 1 Query: 460 NQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILVDYGADVTVSNYDGLTPKRL 693 NQ D G+TPLHLA +G+ + R+LVE GA L AVD GN +H +C L+D G + N GLTP L Sbjct: 24 NQRDSRGRTPLHLAACRGAVDVMRVLVEFGAELSAVDQQGNTAMH--MCGHVDTTQFLIDCGLQSDICNSHGLTPYML 99
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A667Z8X9_9TELE (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) n=3 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Z8X9_9TELE) HSP 1 Score: 62.4 bits (150), Expect = 1.150e-6 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 340 AAGEPGRRKKASLQELHLAIFQGDTAKVESVVER-GDLTA--LNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDV-NGNGVVHAAVCDSPAVLA--ILVDYGADVTVSNYDGLTPKRLCEQYCPPRL 720 A +P K LHLA GD A + ++ G+ A +N AD HG PLHLA +G RLLVEGGA + A + +G+ +H AV ++ +A ++ + ADV +S + G TP L P L Sbjct: 492 AGADPSLLDKDGRTALHLAAQAGDDATLRPLLAHLGERHAHLVNMADYHGLHPLHLAVRRGGERCLRLLVEGGAKINAPEQKSGSSALHLAVRENLFKVACFLITELKADVNMSTFGGNTPLHLAAGLGSPTL 624
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A667YX91_9TELE (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YX91_9TELE) HSP 1 Score: 62.4 bits (150), Expect = 1.160e-6 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 340 AAGEPGRRKKASLQELHLAIFQGDTAKVESVVER-GDLTA--LNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDV-NGNGVVHAAVCDSPAVLA--ILVDYGADVTVSNYDGLTPKRLCEQYCPPRL 720 A +P K LHLA GD A + ++ G+ A +N AD HG PLHLA +G RLLVEGGA + A + +G+ +H AV ++ +A ++ + ADV +S + G TP L P L Sbjct: 531 AGADPSLLDKDGRTALHLAAQAGDDATLRPLLAHLGERHAHLVNMADYHGLHPLHLAVRRGGERCLRLLVEGGAKINAPEQKSGSSALHLAVRENLFKVACFLITELKADVNMSTFGGNTPLHLAAGLGSPTL 663
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A667YWQ1_9TELE (Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YWQ1_9TELE) HSP 1 Score: 62.4 bits (150), Expect = 1.180e-6 Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 1 Query: 340 AAGEPGRRKKASLQELHLAIFQGDTAKVESVVER-GDLTA--LNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDV-NGNGVVHAAVCDSPAVLA--ILVDYGADVTVSNYDGLTPKRLCEQYCPPRL 720 A +P K LHLA GD A + ++ G+ A +N AD HG PLHLA +G RLLVEGGA + A + +G+ +H AV ++ +A ++ + ADV +S + G TP L P L Sbjct: 557 AGADPSLLDKDGRTALHLAAQAGDDATLRPLLAHLGERHAHLVNMADYHGLHPLHLAVRRGGERCLRLLVEGGAKINAPEQKSGSSALHLAVRENLFKVACFLITELKADVNMSTFGGNTPLHLAAGLGSPTL 689
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Match: A0A3Q1HL91_ANATE (Nuclear factor NF-kappa-B p100 subunit-like n=9 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1HL91_ANATE) HSP 1 Score: 62.0 bits (149), Expect = 1.550e-6 Identity = 46/136 (33.82%), Postives = 65/136 (47.79%), Query Frame = 1 Query: 337 AAAGEPGRRKKASLQELHLAIFQGDTAKVESVVER-----GDLTALNQADRHGQTPLHLACYKGSRVMTRLLVEGGANLEAVDV-NGNGVVHAAVCDSPAVLA--ILVDYGADVTVSNYDGLTPKRLCEQYCPPRL 720 +A +P K LHLA GD + + ++ G L +N D HG PLHLA + RLLVEGGAN++A + +GN +H AV +S +A ++ + ADV + G TP L P L Sbjct: 551 SAGADPSLLDKDGRTPLHLAALAGDNSMLRYLLAHLNECHGHL--INSPDYHGLNPLHLAVRRDGERTLRLLVEGGANVDAAEQKSGNTALHLAVRESLFKVACTLITELKADVNAVTFGGNTPLHLAASLGSPSL 684 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig51.13146.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig51.13146.1 >prot_L-elsbetiae_contig51.13146.1 ID=prot_L-elsbetiae_contig51.13146.1|Name=mRNA_L-elsbetiae_contig51.13146.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp MTRLLVEGGANLEAVDVNGNGVVHAAVCDSPAVLAILVDYGADVTVSNYDback to top mRNA from alignment at L-elsbetiae_contig51:46003..52129- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig51.13146.1 ID=mRNA_L-elsbetiae_contig51.13146.1|Name=mRNA_L-elsbetiae_contig51.13146.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6127bp|location=Sequence derived from alignment at L-elsbetiae_contig51:46003..52129- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig51:46003..52129- >mRNA_L-elsbetiae_contig51.13146.1 ID=mRNA_L-elsbetiae_contig51.13146.1|Name=mRNA_L-elsbetiae_contig51.13146.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig51:46003..52129- (Laminarionema elsbetiae ELsaHSoW15)back to top |