mRNA_L-elsbetiae_contig5085.13122.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: D8LQ03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ03_ECTSI) HSP 1 Score: 204 bits (519), Expect = 3.320e-64 Identity = 110/167 (65.87%), Postives = 126/167 (75.45%), Query Frame = 1 Query: 1 VHPSPPPALELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVATLMRRAGRDGGXXXXXXXXXXXXXXXXXXXXXXGEVVVAQVNLVVQVTNVDVAKGRLTRVIYSPLE 501 V P+P +LEL+SV+CGPSDCPVD+ LELSM+FALD+ L GAWW+VKFLVDSVN+RHLVRLGATSERD+PRG+CSM F+V RV VEGIKPCTLANTGLLVA+LMRR G +G + VVAQVNLVVQV DV +GRL RVIYSPLE Sbjct: 38 VVPAPLHSLELISVECGPSDCPVDDRLELSMDFALDRPLAGAWWDVKFLVDSVNERHLVRLGATSERDYPRGSCSMHFEVPRVSVEGIKPCTLANTGLLVASLMRRGGENG-------EPPASAEEKKSGREPGADAVVAQVNLVVQVA--DVGQGRLMRVIYSPLE 195
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: A0A835ZA11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA11_9STRA) HSP 1 Score: 110 bits (276), Expect = 7.320e-28 Identity = 70/160 (43.75%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 25 LELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVATLMRRAGRDGGXXXXXXXXXXXXXXXXXXXXXXGEVVVAQVNLVVQVTNVDVAKGR-LTRVIYSPLE 501 +EL S+D P++CPV EGL+L M F L L A W VKF+VDSVN RH++ LG T + G + F V + V G+KPCTLAN GL+VA+L GR GG G V V VN+VVQV +G+ L R IYSPLE Sbjct: 31 IELTSLDVSPNNCPVAEGLDLKMGFTLSAPLQHAVWSVKFVVDSVNARHVIELGNTEPENLSAGPSRVHFSVPSIDVTGVKPCTLANMGLMVASL---TGRQGG----------------------GRVDVVDVNMVVQVEK----RGQELVRCIYSPLE 161
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: A0A7S1CI95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CI95_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 6.070e-20 Identity = 42/104 (40.38%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 19 PALELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVATLMRRAGRD 330 P +++ + PS PV L L ++F+ + G WEVK++VDSV KR ++ LGAT D+ G SM F V + + GIKP +LAN GLL+A+L +G + Sbjct: 25 PTIDVTRISAEPSIAPVTSELSLEIDFSTTDDIAGGTWEVKYMVDSVGKRKIIMLGATEPEDYAAGANSMSFSVPEINISGIKPSSLANAGLLIASLKSGSGTE 128
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: A0A067CNI8_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CNI8_SAPPC) HSP 1 Score: 89.7 bits (221), Expect = 8.750e-20 Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 19 PALELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVATLMRRAGRD 330 P +++L VD P+ + + L L ++F++ + + +WEV++LVDSV +RH+++LG T D+ RG +F VS + V GIKP LAN GLL AT G D Sbjct: 17 PKVDVLRVDISPNPTHISDELNLEVDFSVSKTVRQGYWEVQYLVDSVLRRHIIKLGRTDATDYTRGENHFQFSVSHIDVSGIKPSNLANCGLLSATFKSEDGDD 120
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: A0A7S3F174_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F174_9EUKA) HSP 1 Score: 83.6 bits (205), Expect = 1.540e-17 Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 22 ALELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVATL 309 +L+ LSV P+ CP+D+ L+L M++ + + L A W++KF+ D NKR +V LG T +D+ G SM+F VS V V +K LAN GLL+A L Sbjct: 7 SLQRLSVQ--PNSCPIDDPLDLEMDYTITKPLPDAHWQIKFVADQANKRKIVVLGETPVQDYDAGAQSMRFSVSEVSVSHLKQHVLANVGLLIAVL 100
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: A0A7S0XDV4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDV4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.410e-16 Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 19 PALELLSVDCGPSD-CPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVA 303 P ++++++D P+ C +++ LEL + F LD+ ++ A+W +KFLVDS +KR + LG T D+P G M F V + + GI P L N+GLL+A Sbjct: 25 PIIQIINIDIQPNTKCNINDPLELRITFELDRDVVAAYWIIKFLVDSTDKRVIRILGETQVEDYPDGESEMIFSVDTIDISGISPSVLTNSGLLMA 120
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: W2H555_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2H555_PHYPR) HSP 1 Score: 80.1 bits (196), Expect = 4.350e-16 Identity = 34/102 (33.33%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 19 PALELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCSMKFQVSRVPVEGIKPCTLANTGLLVATLMRRAG 324 P +++ +VD P+ + + L L ++F LD + W++++LVDSV KRH+++LG ++ RG+ +F S++ + GI+P L N GLL+A +G Sbjct: 15 PTVDVTAVDISPNPAALTDELNLEVDFHLDVPVTNGVWDIEYLVDSVTKRHIIKLGQVEATNYARGDNHFQFSTSQINISGIQPSQLTNCGLLIAAFKGESG 116
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Match: A0A7S0M4T9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M4T9_9CRYP) HSP 1 Score: 67.0 bits (162), Expect = 2.330e-11 Identity = 45/142 (31.69%), Postives = 64/142 (45.07%), Query Frame = 1 Query: 79 LELSMEFALDQALIGAWWEVKFLVDSVNKRHLVRLGATSERDFPRGNCS-MKFQVSRVPVEGIKPCTLANTGLLVATLMRRAGRDGGXXXXXXXXXXXXXXXXXXXXXXGEVVVAQVNLVVQVTNVDVAKGRLTRVIYSPLE 501 L L + F A+ W++K++VD +KR L+ LG TS + S M+ + G KP LAN GL++ATL+ G+V VA VN+V QVT D G L R +YSP++ Sbjct: 3 LTLKLSFTTKVAVNNGIWDIKYMVDMASKRKLIELGKTSAAKYDANTPSNMEISFPGIDTSGFKPHQLANAGLVIATLL-----------------------------DGDVEVASVNMVTQVTKKD---GELLRTVYSPID 112 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5085.13122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5085.13122.1 >prot_L-elsbetiae_contig5085.13122.1 ID=prot_L-elsbetiae_contig5085.13122.1|Name=mRNA_L-elsbetiae_contig5085.13122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp VHPSPPPALELLSVDCGPSDCPVDEGLELSMEFALDQALIGAWWEVKFLVback to top mRNA from alignment at L-elsbetiae_contig5085:3930..8388+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5085.13122.1 ID=mRNA_L-elsbetiae_contig5085.13122.1|Name=mRNA_L-elsbetiae_contig5085.13122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4459bp|location=Sequence derived from alignment at L-elsbetiae_contig5085:3930..8388+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5085:3930..8388+ >mRNA_L-elsbetiae_contig5085.13122.1 ID=mRNA_L-elsbetiae_contig5085.13122.1|Name=mRNA_L-elsbetiae_contig5085.13122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig5085:3930..8388+ (Laminarionema elsbetiae ELsaHSoW15)back to top |