mRNA_L-elsbetiae_contig5072.13102.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A7R9U2J4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.440e-17 Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 3 Query: 24 STPKLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQRLVRVVFNGKEAVLPGAE----GAWIPLTELRERLEDVMPT 275 S PKL +FSGHDST++P+LA L +YDG WP YSS++SF+VAE G+ L RVV+N + L G G W+ +L+ L+ +P+ Sbjct: 77 SEPKLSLFSGHDSTLVPLLAVLGVYDGAWPGYSSFVSFEVAEGPDGKVLARVVYNNEAQALSGIAKEDPGHWVSWEDLKAGLQKWIPS 164
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A7S2W840_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W840_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.080e-13 Identity = 31/85 (36.47%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 33 KLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQRLVRVVFNGKEAVLPGAEGAWIPLTELRERLEDVMPTPEDL 287 +++ +S HD+T++PVL +L +DG WPP++SY+SF++ E + G+ +RV++NGK V+ G A L + R+ ++ + P+ D+ Sbjct: 301 RVLFYSAHDTTVVPVLTSLGQFDGVWPPFASYVSFELWESKDGRHSIRVLYNGKPLVVSGCHSARCSLEDFRQAMQSIRPSNYDM 385
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: UPI001401DE40 (lysophosphatidic acid phosphatase type 6 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001401DE40) HSP 1 Score: 76.6 bits (187), Expect = 5.630e-13 Identity = 34/85 (40.00%), Postives = 56/85 (65.88%), Query Frame = 3 Query: 36 LVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQR-LVRVVFNGKEAVLPGAEGAWIPLTELRERLEDVMPTPEDL 287 LV+FS HD+T+LP+L L+++DG WPP++S+++ ++ + +R VR+V+NGKE +P PL E R + D+ T E+L Sbjct: 328 LVLFSAHDTTLLPLLVGLRVFDGRWPPFASHVAIELHVEPVSRRAFVRLVYNGKERRMPQCSATLCPLEEFRAAVADLALTAEEL 412
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A6T8KKC2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8KKC2_HEMAN) HSP 1 Score: 73.9 bits (180), Expect = 5.090e-12 Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 3 Query: 30 PKLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQR-LVRVVFNGKEAVLPGAEGAW-IPLTELRERLEDVMPTPE 281 P + VFSGHDST++P+L AL YD WPPY+S++S ++ DEG R +VR ++NG L G++ IP T +E+L+D PE Sbjct: 364 PLMRVFSGHDSTLMPLLVALGGYDDLWPPYASHVSLELLYDEGRDRHVVRCIYNGAAIGLFGSKDTSPIPYTLFKEKLKDRFKPPE 449
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A1S3HPK8_LINUN (lysophosphatidic acid phosphatase type 6 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HPK8_LINUN) HSP 1 Score: 72.8 bits (177), Expect = 1.230e-11 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 24 STPKLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQRLVRVVFNGKEAVLPGAEGAWIPLTELR 248 S+ +L ++S HDS+++PVL AL IYD WPPY++ + +V ED+ G +RV + G E LPG G I L E + Sbjct: 323 SSQRLCLYSVHDSSLVPVLVALGIYDDKWPPYAADLCIEVYEDQQGTHWIRVTYCGNEQTLPGCSGPVITLEEYK 397
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A2P6NZU5_9EUKA (Component of the counting factor complex n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NZU5_9EUKA) HSP 1 Score: 72.8 bits (177), Expect = 1.300e-11 Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 33 KLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQRLVRVVFNGKEAVLPGAEGAWIPLTELRERLEDVMPTPE 281 K +++SGHDST+ P+L L IYDG WPP+ +Y++F++ +G + V+V +NGKE LP E P+ + ++ + TP+ Sbjct: 395 KYLLYSGHDSTVAPLLGLLNIYDGLWPPFRAYVNFELYSRDG-EHFVQVKYNGKEMKLPACEKVMCPVKTVLAFFQERVVTPQ 476
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: D7FXB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB6_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 3.730e-11 Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 3 VPEAGIPSTPKLVVFSGHDSTMLPVLAALKIYDGNWPPYS 122 VPEAG+PSTPKL +FSGHDST++P+L ALK+YD WPPY+ Sbjct: 347 VPEAGMPSTPKLAIFSGHDSTLVPILTALKVYDDVWPPYA 386
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: UPI0018E23CBF (lysophosphatidic acid phosphatase type 6 n=1 Tax=Cyprinodon tularosa TaxID=77115 RepID=UPI0018E23CBF) HSP 1 Score: 69.7 bits (169), Expect = 8.110e-11 Identity = 31/84 (36.90%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 33 KLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAED-EGGQRLVRVVFNGKEAVLPGAEGAWIPLTELRERLEDVMPTPE 281 KL ++S HD+T++P L AL+IYD WPPY++ I+ ++ + + G V+V + G++ ++PG G + PL E ++ L PE Sbjct: 198 KLFLYSAHDTTLIPCLMALEIYDMKWPPYAADITLELHQHRQTGDAFVKVSYIGQDQLIPGCSGVYCPLQEFKQLLSAYTLNPE 281
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A3Q2E0Y9_CYPVA (Lysophosphatidic acid phosphatase type 6-like n=4 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2E0Y9_CYPVA) HSP 1 Score: 69.3 bits (168), Expect = 1.890e-10 Identity = 31/84 (36.90%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 33 KLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAED-EGGQRLVRVVFNGKEAVLPGAEGAWIPLTELRERLEDVMPTPE 281 KL ++S HD+T++P L AL+IYD WPPY++ I+ ++ + + G V+V + G++ ++PG G + PL E ++ L PE Sbjct: 324 KLFLYSAHDTTLIPCLMALEIYDMKWPPYAADITLELHQHRQTGDAFVKVSYIGQDQLIPGCSGVYCPLQEFKKLLSAYTLNPE 407
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Match: A0A7S0SR77_9STRA (Hypothetical protein n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR77_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.390e-10 Identity = 26/79 (32.91%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 33 KLVVFSGHDSTMLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQ-RLVRVVFNGKEAVLPGAEGAWIPLTELRERLEDV 266 ++ V+SGHDS+++P++ AL +YD WPPY+SY+SF++ ++ + VR ++N ++ + G W+ + +RL+ + Sbjct: 4 RMTVYSGHDSSLVPLMCALGLYDDVWPPYASYLSFEIVTNKYSNIKYVRAIYNDEDRNMLGRSQTWLLYSTFIDRLKQM 82 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5072.13102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5072.13102.1 >prot_L-elsbetiae_contig5072.13102.1 ID=prot_L-elsbetiae_contig5072.13102.1|Name=mRNA_L-elsbetiae_contig5072.13102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp MLPVLAALKIYDGNWPPYSSYISFDVAEDEGGQRLVRVVFNGKEAVLPGAback to top mRNA from alignment at L-elsbetiae_contig5072:5900..8506+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5072.13102.1 ID=mRNA_L-elsbetiae_contig5072.13102.1|Name=mRNA_L-elsbetiae_contig5072.13102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2607bp|location=Sequence derived from alignment at L-elsbetiae_contig5072:5900..8506+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5072:5900..8506+ >mRNA_L-elsbetiae_contig5072.13102.1 ID=mRNA_L-elsbetiae_contig5072.13102.1|Name=mRNA_L-elsbetiae_contig5072.13102.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig5072:5900..8506+ (Laminarionema elsbetiae ELsaHSoW15)back to top |