mRNA_L-elsbetiae_contig506.13093.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: D7G2I9_ECTSI (Coiled-coil domain-containing protein 86 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I9_ECTSI) HSP 1 Score: 239 bits (610), Expect = 9.210e-76 Identity = 185/264 (70.08%), Postives = 198/264 (75.00%), Query Frame = 1 Query: 1 MRTRSRQGGGEGKPAAEEAQAA---STPRSSSRSAKKXXXXXXXXPSAETKKPKGLASA-------APAATPPSKAARAKGASLQKAKKSAPSKPSKEGKAV---EDQSLANDKDGEA---GAINAG--LGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFVSPWGGGKKK 738 MRTRSR+G G G+P EA + PRSS + XXXXXXXX TKK K +A++ AP A P KA +G S K KKSA + AV E QSL DKDG+ G I A +GVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIED XXXXXXXXXXX QNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQ+NSRTGE+EFVSPWGGGKKK Sbjct: 1 MRTRSREGTGGGEPVEAEALVSLPLQPPRSSKKRXXXXXXXXXXXXXXATKKSKEVANSLEPPAPTAPEAITPGKAGEKEGESQSKTKKSASKAGEHDVAAVGGKEGQSLGKDKDGKRAHDGPITAADRMGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDXXXXXXXXXXXXXQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQINSRTGEVEFVSPWGGGKKK 264
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A836C9I7_9STRA (Coiled-coil domain-containing protein 86 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I7_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.620e-30 Identity = 70/123 (56.91%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 352 GRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFVSPW 720 GR VSGR WK+R+QSQRA QRTT T+ LSSSW K + K A+ E+EMR+AK+ E E +NEMK++T+QTI+KTHK+K MSKKQLRQIKK QVNS+TG++E VSPW Sbjct: 6 GRNVSGRLWKSRSQSQRAIAQRTTGTKELSSSWKAKEAERTKLAAVKQKEREMREAKIAEKEALKAAKLEREKRRAENEMKSSTFQTITKTHKLKGMSKKQLRQIKKMQVNSKTGQVELVSPW 128
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A6U1MPN8_9STRA (Coiled-coil domain-containing protein 86 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MPN8_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 6.640e-20 Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1 Query: 340 VAPKGRCVSGRDWK-ARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFVSPW 720 +A +GR VSGR+WK +RN+S S Q T + LSSSW +K + K++ +E+E+++ Q+ E XXXXXXX QQN +K TTYQTI+K HK+KT+SKKQLRQIKK +V+ +TG++E VSPW Sbjct: 8 MAKQGRNVSGRNWKKSRNKS---STQVTKVVKQLSSSWQQKQLERDKKRRTKEIEEEIKERARQDKEXXXXXXXXXAARRQQNLLKATTYQTITKVHKLKTLSKKQLRQIKKTRVDPKTGQVELVSPW 132
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A067C5E8_SAPPC (Coiled-coil domain-containing protein 86 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5E8_SAPPC) HSP 1 Score: 87.8 bits (216), Expect = 2.820e-18 Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 346 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFV 711 P+G+ VS R WK + Q+QR SM AT+TLS++W +K+ +KAK++ + +E E+ K QE DK NEMK++T Q ISKTHK+KTMSKKQLRQI+K ++N + G +E+V Sbjct: 11 PRGQPVSNRPWK-KTQTQRKSMMTYKATKTLSTTWDEKMAMKAKKKEMKDLEHEIAARKKQERLDKKIAREEKEKRRMANEMKSSTVQQISKTHKLKTMSKKQLRQIRKTRMN-KNGVVEYV 130
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A1V9Z366_9STRA (Coiled-coil domain-containing protein 86 n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z366_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.090e-17 Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 346 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFV 711 P+G+ VSGR WK + Q+ R SM AT+TLS++W +K+ +KAK++ + +E E+ K QE DK +NEMK+ T Q ISKTHK+KTMSKKQLR I+K ++N + G +E+V Sbjct: 11 PRGKPVSGRPWK-KAQTARKSMMTYKATKTLSTTWEEKMAMKAKKKEMKDLEHEIAARKRQERLDKKLAREEKEKRRLENEMKSATVQNISKTHKLKTMSKKQLRNIRKTRMN-KNGVVEYV 130
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A7S2SQR5_9STRA (Coiled-coil domain-containing protein 86 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQR5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 6.430e-17 Identity = 62/124 (50.00%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 349 KGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFVSPW 720 KGR VSGR WK RNQ + +++ + + +T SW ++ K +R + +E XXXXXXX Q N MK TT QTI+KTHK+KTM+KKQLRQIKK QVNSRTG++E VSPW Sbjct: 73 KGRNVSGRSWKRRNQRRASTVIQDASRKT---SWEERQSKKRRRDEMKDLEXXXXXXXXXXXXXXXXXXXXXLAERQANAMKGTTMQTITKTHKLKTMNKKQLRQIKKTQVNSRTGQVELVSPW 193
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A024TTD3_9STRA (Coiled-coil domain-containing protein 86 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TTD3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.490e-15 Identity = 56/122 (45.90%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 346 PKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFV 711 P+G VSGR WK + Q + SM AT+TLS++W +K+ KAK++ + +E E+ + K QE DK NE K +T Q I KTHK+KTMSKKQLR IKK ++N + GEIE V Sbjct: 13 PRGVPVSGRSWK-KPQRAKNSMMTFKATKTLSTTWDEKMAAKAKKKEMKELEHEIANRKKQEKIDKRVAREEKEKRRIANEFKASTLQVIKKTHKLKTMSKKQLRNIKKTRMN-KNGEIELV 132
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A6G0X8C4_9STRA (Coiled-coil domain-containing protein 86 n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X8C4_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.560e-15 Identity = 55/131 (41.98%), Postives = 80/131 (61.07%), Query Frame = 1 Query: 319 AINAGLGVAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFV 711 A A AP+G+ VSGR WK + Q + SM AT+TLS++W +K+ KAK++ + +E+E+ + K QE DK NE+K+ + Q I KT K+KTMSKKQLR IKK ++N + G++E V Sbjct: 5 AAEAKKNEAPRGKPVSGRFWK-KPQKAKNSMMTFKATKTLSTTWEEKMAAKAKKKEMKELEQEIANRKKQEKIDKRLAREEKEKRRMANELKSASVQVIRKTGKLKTMSKKQLRNIKKTRMN-KNGQVELV 133
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A484DTI9_BRELC (Coiled-coil domain-containing protein 86 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTI9_BRELC) HSP 1 Score: 76.3 bits (186), Expect = 8.560e-14 Identity = 57/124 (45.97%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 340 VAPKGRCVSGRDWKARNQSQRASMQRTTATETLSSSWAKKLEIKAKRQAIMAMEKEMRDAKLQEIEDKXXXXXXXXXXXQQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFV 711 V P+GR VSGR WK R Q R S Q+ T+ LS++W +KL+ ++K + + ++KE++ + E + XXXXXXX++NE+K+ + Q IS+TH++KTMSKKQLR IKK VN + G +E+V Sbjct: 19 VPPRGRPVSGRVWK-RVQKTRFSSQKLKGTKVLSTTWEEKLQKRSKLKELKELQKEIKSRRQSEKDAVRQARXXXXXXXKENELKSASVQVISRTHRLKTMSKKQLRNIKKTIVN-KNGVVEYV 140
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Match: A0A7S2SQP8_9STRA (Coiled-coil domain-containing protein 86 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQP8_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.110e-13 Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 1 Query: 577 QQNEMKNTTYQTISKTHKMKTMSKKQLRQIKKRQVNSRTGEIEFVSPW 720 Q N MK TT QTI+KTHK+KTM+KKQLRQIKK QVNSRTG++E VSPW Sbjct: 66 QANAMKGTTMQTITKTHKLKTMNKKQLRQIKKTQVNSRTGQVELVSPW 113 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig506.13093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig506.13093.1 >prot_L-elsbetiae_contig506.13093.1 ID=prot_L-elsbetiae_contig506.13093.1|Name=mRNA_L-elsbetiae_contig506.13093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp MRTRSRQGGGEGKPAAEEAQAASTPRSSSRSAKKRSAPETSSPSAETKKPback to top mRNA from alignment at L-elsbetiae_contig506:31862..35002- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig506.13093.1 ID=mRNA_L-elsbetiae_contig506.13093.1|Name=mRNA_L-elsbetiae_contig506.13093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3141bp|location=Sequence derived from alignment at L-elsbetiae_contig506:31862..35002- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig506:31862..35002- >mRNA_L-elsbetiae_contig506.13093.1 ID=mRNA_L-elsbetiae_contig506.13093.1|Name=mRNA_L-elsbetiae_contig506.13093.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig506:31862..35002- (Laminarionema elsbetiae ELsaHSoW15)back to top |