mRNA_L-elsbetiae_contig506.13091.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig506.13091.1
Unique NamemRNA_L-elsbetiae_contig506.13091.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A6H5J814_9PHAE (Polyketide_cyc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J814_9PHAE)

HSP 1 Score: 474 bits (1220), Expect = 8.060e-158
Identity = 262/363 (72.18%), Postives = 290/363 (79.89%), Query Frame = 3 
Query:  318 AMPESMRRRREGPADGSGARLVSAVLVTSLLLSWMPATSTTSAFVVPAPAAAGSFCGECSSNQVRAVVRSHLRKPLSGTGTGS-----DGGRRGAGGLQMLWSGGRRTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLASDAESVQENSAVKMGAEAFVAK-NGSGGYGQPDWESDETLEAYLSS 1388
            ++P   R +R      +G R    V VTSLLLS +PA  TT AFVV APAA GSFCGEC + QV+A+ RS LR+PL     GS     DG    A  LQMLWSGGRRT+GNEVTVNIERTS NSRRISGSIVINRPIEDVWLTLTDY+RLA+YVPNLT+S+ +PS++G IRLWQEGAQKIVGFDFRASVEMFM+EH+GDPEN+MAQRKLTFGLL+SRMFNEFDGEWRMQFNSRKQ N  QG  YQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNL+ALK AAE VTPEY+EMRRKEREQ A      A+   A D E  Q N+  K GAEAFVAK NG  GYGQP+WESDETLEAYL++
Sbjct:    2 SVPLGQRAQRRRRKHSAGTR----VFVTSLLLSCLPAYCTT-AFVVRAPAATGSFCGECGNEQVKALARSDLRRPLPYPARGSTKIARDGE---ASRLQMLWSGGRRTRGNEVTVNIERTSRNSRRISGSIVINRPIEDVWLTLTDYNRLAKYVPNLTESKLRPSNDGGIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENKMAQRKLTFGLLESRMFNEFDGEWRMQFNSRKQFNTAQGPQYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLSALKLAAEAVTPEYVEMRRKEREQEAAK--RFASPPPADDREKRQANAIAKGGAEAFVAKGNGDEGYGQPEWESDETLEAYLNT 354
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: D7G841_ECTSI (Polyketide_cyc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G841_ECTSI)

HSP 1 Score: 408 bits (1049), Expect = 1.550e-133
Identity = 210/269 (78.07%), Postives = 228/269 (84.76%), Query Frame = 3 
Query:  600 MLWSGGRRTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLA-----SDAESVQENSAVKMGAEAFVAK-NGSGGYGQPDWESDETLEAYLSS 1388
            MLWSGGRRT+GNEVTVNIERTS NSRRISGSIV+NRPIEDVWLTLTDYDRLA+YVPNLTQS+ +PS++G IRLWQEGAQKIVGFDFRASVEMFM+EH+GDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQ N  QG +YQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALK AAE VTPEY+EMRR+ER                      + E  + N+  K GAEAFVAK NG  GYGQP+WESDETLEAYL++
Sbjct:    1 MLWSGGRRTQGNEVTVNIERTSRNSRRISGSIVVNRPIEDVWLTLTDYDRLAKYVPNLTQSKVRPSNDGGIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQFNTAQGPEYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKLAAEAVTPEYVEMRRRERXXXXXXXXXXXXXXXXXXXXXDEREKREANAIAKGGAEAFVAKGNGDEGYGQPEWESDETLEAYLNT 269
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A835ZJC3_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJC3_9STRA)

HSP 1 Score: 275 bits (702), Expect = 4.320e-82
Identity = 149/282 (52.84%), Postives = 193/282 (68.44%), Query Frame = 3 
Query:  600 MLWSGGRRTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSR--KQTNGPQGLDYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLASDAESVQENSAVKMGAEAFVA-------------------KNGSGGYGQPDWESDETLEAYL 1382
            MLWSGGRRT+ ++VTVNIER S+NSRRISGSI++++PIEDVWL LTDYDRL++YVPNLTQS   PS  G IRL+QEGAQ+IVGFDFRAS+ M M+EHYGDP++++A RK+ F L+DS MF +F GEWR+QFNSR   +  GP    Y Y+TK+FYMV+IRPKG VPV+ALEWQIS EVPNNLAA+K+ AE +   + + R    +QA     + +   ++  +++    +AV     A VA                      + G     WE+DETLEAY+
Sbjct:    1 MLWSGGRRTRPDQVTVNIERPSLNSRRISGSIIVDKPIEDVWLVLTDYDRLSDYVPNLTQSRQVPSPTGGIRLFQEGAQQIVGFDFRASLVMDMEEHYGDPDDKLAMRKIKFKLVDSAMFTDFSGEWRLQFNSRIVNKGAGPGQEKYTYSTKVFYMVNIRPKGVVPVVALEWQISEEVPNNLAAVKRTAEVMDSAFFDAR----QQAMDARQLRSGVYISGYSQASATAAAVXXXXXANVALTTQQPVLQQQQQRYPLPPDQSAAGVDSNGWETDETLEAYI 278
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A6V1KTJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KTJ0_HETAK)

HSP 1 Score: 211 bits (536), Expect = 8.630e-58
Identity = 132/273 (48.35%), Postives = 165/273 (60.44%), Query Frame = 3 
Query:  600 MLWSGGRRTKGN-----EVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQ--YTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLASDAESVQENSAVKMGAEAFV---AKNGSG--GYGQPDWESDETLEAYL 1382
            M++  GRR  G+      V V IE  SMNSR+ISGSIVI+RP++DVW  L+DYD LA+ VPNLTQS+  P   G IRL+QEGAQKI+GFDFRAS+ M M E     E +  QRK+ F L++S MFN FDGEW +Q  SR +   P G D Q  YT+K+FY V ++P+GPVPV ALEWQI +EVPNNL A+K A ER+              A V PA         DA    + +A   GA       A+ G+G    G   WE DETL+ Y+
Sbjct:   68 MVFGFGRRKDGSPGHEDNVDVRIEAPSMNSRKISGSIVIDRPVDDVWKILSDYDHLADNVPNLTQSKLVPHPTGGIRLFQEGAQKIIGFDFRASLTMDMTEVMEKAEEKFGQRKILFKLVESAMFNGFDGEWSIQNYSRIKNPNPTGTDDQWIYTSKVFYSVVVKPRGPVPVAALEWQIKSEVPNNLRAVKLATERLPCSA---------GAYVPPA-----EAHFDAPPAVDPAAAAYGAXXXXXXKARTGAGVAASGGSYWEEDETLDMYV 326
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A4D9CWA6_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA6_9STRA)

HSP 1 Score: 202 bits (514), Expect = 4.990e-54
Identity = 124/278 (44.60%), Postives = 168/278 (60.43%), Query Frame = 3 
Query:  588 GGLQML-----WSGGRRTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSE---TKPS-----DNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLASDAESVQENSAVKMGAEAFVAKNGSGGYGQPDWESDETLEAYL 1382
            G L+M+     W GG+     EV VNIE  S N RRIS SIV+NRP+ DVW  LTDY+ L+EYVPNLTQS    T P       N ++RL+QEGAQ IVGF+F+AS+ M M+E     + ++ QR++ F L+DS MF++F GEWR+Q  SR +T   +  ++ Y+TKLFYMV+++PKGPVPV ALEW+I  +VP NL A+K A+E++  +       E++QAA+       A+LA+     Q    V                   DW SDETL AY+
Sbjct:   78 GSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVVEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRT-ACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDC------EQDQAAL-------AALAAGRREQQSRMTVAQ-----------------DWMSDETLGAYI 324
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: W7TTP4_9STRA (START-like domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTP4_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.780e-53
Identity = 124/278 (44.60%), Postives = 169/278 (60.79%), Query Frame = 3 
Query:  588 GGLQML-----WSGGRRTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSE---TKPS-----DNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLASDAESVQENSAVKMGAEAFVAKNGSGGYGQPDWESDETLEAYL 1382
            G L+M+     W GG+     EV VNIE  S N RRIS SIV+NRP+ DVW  LTDY+ L+EYVPNLTQS    T P       N ++RL+QEGAQ IVGF+F+AS+ M M+E +   + ++ QR++ F L+DS MF++F GEWR+Q  SR +T   +  ++ Y+TKLFYMV+++PKGPVPV ALEW+I  +VP NL A+K A+E++  +       E++QAA+       A+LA+     Q    V                   DW SDETL AY+
Sbjct:  190 GSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRT-ACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDC------EQDQAAL-------AALAAGRREQQARMTVAQ-----------------DWMSDETLGAYI 436
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A0G4H7W0_VITBC (Polyketide_cyc domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H7W0_VITBC)

HSP 1 Score: 199 bits (507), Expect = 6.960e-53
Identity = 102/191 (53.40%), Postives = 135/191 (70.68%), Query Frame = 3 
Query:  639 VTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKP------------SDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQ--YTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERV 1169
            V+VNIER + N RRISGS++++  +ED W  LTDYD LA +VPNL  S+  P             D  ++RL+QEGAQKI+GFDFRA+V M M E  GDPENRMA R + F L DS+ F++FDGEW++Q ++R+    P   D +  YTTKLFY+V +RPKGPVPV+ALEW+I  +VP NL A+K+AAE++
Sbjct:  146 VSVNIERPAANVRRISGSVIVDTSMEDCWSILTDYDNLAAHVPNLVVSQRVPLPRSLASSGLNGDDMWQMRLYQEGAQKIIGFDFRAAVTMDMREVLGDPENRMAPRLIEFKLADSQFFSQFDGEWKIQAHTRRVRRHPATGDDEISYTTKLFYVVTVRPKGPVPVMALEWRIKEDVPTNLKAVKQAAEKI 336
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A7S2SEL4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEL4_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.620e-47
Identity = 96/178 (53.93%), Postives = 124/178 (69.66%), Query Frame = 3 
Query:  636 EVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERV 1169
            ++ V IER +MNSRRIS SIVI+RP EDVW  LTDY+ LA +VPNL QS       G +RL+QEGAQKI+GFDF AS+ M M+E   D     +++ + F L++SR F+EFDG W++Q +SR+   G     + YTTKLFY V IRP GPVPVL LEW+I  +VP NL  +K A+ER+
Sbjct:  132 KIPVLIERPTMNSRRISASIVIDRPPEDVWSILTDYNNLATHVPNLVQSRLLDRPGGGLRLYQEGAQKIIGFDFSASLVMDMEEVL-DSRAGSSKKAIQFKLVESRFFSEFDGIWQLQVHSRRPIPGTN--TFTYTTKLFYEVFIRPNGPVPVLPLEWRIREDVPTNLRGVKTASERL 306
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A7R9YDQ6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDQ6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 7.850e-47
Identity = 112/262 (42.75%), Postives = 157/262 (59.92%), Query Frame = 3 
Query:  615 GRRTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRK-LTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLD----YQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAVGPAMGAAASLASDAESVQENSAVKMGAEAFVAKNGSGGYGQPDWESDETLEAYLS 1385
            GR +K +EV V IER + N RRISG+ V++  ++DVW  LTDYD LA++VPNLTQS       G IRL+QEGAQKIVGF+FRAS+ M M     D +   A+++ + F L++S+MF +F GEWR++  SRK+   P   +    Y Y+T +FY V I+P+G VPV ALEW+I  +VP N+ A+KKA+E    E I  R++ R  AA                 ++E    K  A++  A           +E+DETLEAY++
Sbjct:   59 GRSSKDSEVVVTIERLASNIRRISGTCVVDSSVDDVWAILTDYDNLADHVPNLTQSRRLNHPQGGIRLFQEGAQKIVGFNFRASLTMDMTVKIDDDKADAARKRAIGFELVESQMFKDFSGEWRLEPFSRKKKRDPVSGNVIPGYTYSTMMFYTVTIKPRGVVPVGALEWRIKEDVPTNMLAVKKASEE-KGELIRTRQEARLAAA----------------ELEEQMKPKRAAKSQWA-----------FEADETLEAYMA 292
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BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Match: A0A7S0JC23_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC23_9EUKA)

HSP 1 Score: 177 bits (448), Expect = 1.480e-46
Identity = 102/180 (56.67%), Postives = 118/180 (65.56%), Query Frame = 3 
Query:  639 VTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPNLTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLD---YQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKKAAERV 1169
            V VNI  T  NSR IS SI++    EDVW  LTDYD LA +VPNL +SE +P   G IRL+QEGAQKIVGFDFRAS+ M M E   D   R  QR + F L+DS MF  F+G WR+   SR     P   D   Y+YTTKLFYMV I PKG VPV ALEW+I  +VP NL ++K AAERV
Sbjct:   76 VPVNIAMTGFNSRSISASIIVAAAPEDVWTILTDYDNLATHVPNLVKSELRPHPTGGIRLFQEGAQKIVGFDFRASLTMDMRELTDDA--RRGQRSIEFKLVDSLMFAAFNGVWRLAPYSR----APSRTDPTKYEYTTKLFYMVDITPKGLVPVPALEWRIREDVPINLQSVKIAAERV 249
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig506.13091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J814_9PHAE8.060e-15872.18Polyketide_cyc domain-containing protein n=1 Tax=E... [more]
D7G841_ECTSI1.550e-13378.07Polyketide_cyc domain-containing protein n=1 Tax=E... [more]
A0A835ZJC3_9STRA4.320e-8252.84Polyketide_cyc domain-containing protein n=1 Tax=T... [more]
A0A6V1KTJ0_HETAK8.630e-5848.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CWA6_9STRA4.990e-5444.60Polyketide_cyc domain-containing protein n=1 Tax=N... [more]
W7TTP4_9STRA2.780e-5344.60START-like domain protein n=1 Tax=Nannochloropsis ... [more]
A0A0G4H7W0_VITBC6.960e-5353.40Polyketide_cyc domain-containing protein n=1 Tax=V... [more]
A0A7S2SEL4_9STRA2.620e-4753.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9YDQ6_9STRA7.850e-4742.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0JC23_9EUKA1.480e-4656.67Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig506contigL-elsbetiae_contig506:19425..25102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.1
Seed ortholog evalue6.7e-113
Seed eggNOG ortholog2880.D7G841
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Polyketide cyclase / dehydrase and lipid transport
EggNOG OGs2CXIA@1,2RXSU@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionStreptomyces cyclase/dehydrase
Ec32 orthologEc-12_001590.1
Exons7
Model size2597
Cds size1071
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816512.6864414-UTR-L-elsbetiae_contig506:19424..197441622816512.6864414-UTR-L-elsbetiae_contig506:19424..19744Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig506 19425..19744 +
1691683613.4806976-UTR-L-elsbetiae_contig506:19424..197441691683613.4806976-UTR-L-elsbetiae_contig506:19424..19744Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig506 19425..19744 +
1622816512.7796497-UTR-L-elsbetiae_contig506:23896..251021622816512.7796497-UTR-L-elsbetiae_contig506:23896..25102Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig506 23897..25102 +
1691683613.6122713-UTR-L-elsbetiae_contig506:23896..251021691683613.6122713-UTR-L-elsbetiae_contig506:23896..25102Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig506 23897..25102 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816512.6976025-CDS-L-elsbetiae_contig506:19744..199301622816512.6976025-CDS-L-elsbetiae_contig506:19744..19930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 19745..19930 +
1691683613.5011768-CDS-L-elsbetiae_contig506:19744..199301691683613.5011768-CDS-L-elsbetiae_contig506:19744..19930Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 19745..19930 +
1622816512.7085016-CDS-L-elsbetiae_contig506:20780..209121622816512.7085016-CDS-L-elsbetiae_contig506:20780..20912Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 20781..20912 +
1691683613.5104167-CDS-L-elsbetiae_contig506:20780..209121691683613.5104167-CDS-L-elsbetiae_contig506:20780..20912Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 20781..20912 +
1622816512.7206178-CDS-L-elsbetiae_contig506:21392..214701622816512.7206178-CDS-L-elsbetiae_contig506:21392..21470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 21393..21470 +
1691683613.5198-CDS-L-elsbetiae_contig506:21392..214701691683613.5198-CDS-L-elsbetiae_contig506:21392..21470Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 21393..21470 +
1622816512.7313228-CDS-L-elsbetiae_contig506:22191..223691622816512.7313228-CDS-L-elsbetiae_contig506:22191..22369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 22192..22369 +
1691683613.5642598-CDS-L-elsbetiae_contig506:22191..223691691683613.5642598-CDS-L-elsbetiae_contig506:22191..22369Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 22192..22369 +
1622816512.7435315-CDS-L-elsbetiae_contig506:22636..227461622816512.7435315-CDS-L-elsbetiae_contig506:22636..22746Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 22637..22746 +
1691683613.5780716-CDS-L-elsbetiae_contig506:22636..227461691683613.5780716-CDS-L-elsbetiae_contig506:22636..22746Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 22637..22746 +
1622816512.7570758-CDS-L-elsbetiae_contig506:22939..231221622816512.7570758-CDS-L-elsbetiae_contig506:22939..23122Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 22940..23122 +
1691683613.5890179-CDS-L-elsbetiae_contig506:22939..231221691683613.5890179-CDS-L-elsbetiae_contig506:22939..23122Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 22940..23122 +
1622816512.769321-CDS-L-elsbetiae_contig506:23692..238961622816512.769321-CDS-L-elsbetiae_contig506:23692..23896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 23693..23896 +
1691683613.6019337-CDS-L-elsbetiae_contig506:23692..238961691683613.6019337-CDS-L-elsbetiae_contig506:23692..23896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig506 23693..23896 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig506.13091.1prot_L-elsbetiae_contig506.13091.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig506 19745..23896 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig506.13091.1

>prot_L-elsbetiae_contig506.13091.1 ID=prot_L-elsbetiae_contig506.13091.1|Name=mRNA_L-elsbetiae_contig506.13091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=357bp
MPESMRRRREGPADGSGARLVSAVLVTSLLLSWMPATSTTSAFVVPAPAA
AGSFCGECSSNQVRAVVRSHLRKPLSGTGTGSDGGRRGAGGLQMLWSGGR
RTKGNEVTVNIERTSMNSRRISGSIVINRPIEDVWLTLTDYDRLAEYVPN
LTQSETKPSDNGKIRLWQEGAQKIVGFDFRASVEMFMDEHYGDPENRMAQ
RKLTFGLLDSRMFNEFDGEWRMQFNSRKQTNGPQGLDYQYTTKLFYMVHI
RPKGPVPVLALEWQISNEVPNNLAALKKAAERVTPEYIEMRRKEREQAAV
GPAMGAAASLASDAESVQENSAVKMGAEAFVAKNGSGGYGQPDWESDETL
EAYLSS*
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mRNA from alignment at L-elsbetiae_contig506:19425..25102+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig506.13091.1 ID=mRNA_L-elsbetiae_contig506.13091.1|Name=mRNA_L-elsbetiae_contig506.13091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5678bp|location=Sequence derived from alignment at L-elsbetiae_contig506:19425..25102+ (Laminarionema elsbetiae ELsaHSoW15)
CGTACTTGGCGTACTGGGCGTACTTGGCGACTTGGCACGCACACACCAAA
GCTCTTCACACAGTCCATTTACGGCCACAACCGGTGACATCAGCTCCTCA
CAACCTACAGCGAGTACCTTCGGCTTTCTCTCTGTGCTAAATCATCGGGA
ATATCCGGCTAACAACGCAGCAACGCACCCCTCGGGTTCTCCAGCACACC
TCATCCGTCTCTCTCGCTCTCTCCAGCGCACGTGCGTTTCAAGGGGTTGA
ACGGTTTACTGCCCAGCACCTTTGGAGCTCTACTACCCTTGGTCTTCTGC
TGCAACAACGGAACGGAGCAATGCCTGAGAGCATGCGAAGGAGGAGAGAG
GGGCCGGCTGATGGGTCGGGAGCACGGCTGGTCTCGGCGGTGCTAGTGAC
ATCCCTCCTGCTGAGCTGGATGCCAGCCACCTCTACCACCAGTGCGTTCG
TGGTCCCAGCCCCTGCGGCGGCGGGGAGCTTCTGCGGCGAGTGCAGCAGC
AATCAGGTGTGAGACGAACCTTCCGTAGAGGCTTTCGGGTTGAGTGCCGA
CCATATCAAAGCGTTGTCTATTTTTTTAGTGTTTGTTTGGTTGAACGTTC
TCACAGCAACCTTCAACTTCCAGTTTTGTCTTGAGGTGAGACCCTGTGAT
AGAACATGTCATATTTAGCCGTGGTCAGCCCCTACTATGGTTCGCAGTTA
TGGTGTAGATAACAGCAGGCGTTTGCATTTGATTCACACGGAGAATACCA
GTGCCAGCAGTCGTGTTGTCAAGTGTTGGTGGAGTTACCGGTAGTTGTTT
TTCATCGATGACGTCCGACCACCGCAGACTTTGTTTAGACTCTTGGTCTT
CGGCAGTTGAGTAGAGGTTCGTCAGTACCGGTAGATGCACCCGCCTCCCC
AACTCTTAACCCAGAAACAGCAGTGCCAGATCTTACCTATATGCTCAGCC
TTTGATCTGTAGAGTCCGGAGAAGCAACCCTCTCGTGGATTCCCGCGTTG
ATGTACGATTTTCCGAAAATTACCTGGAAACTTTGCTCAATTCTTACCGA
TGTTCTCACGTGGCCGCCCCTGGATCTGGGGGTGCACCGCCTTTTACGCC
TGCAACTGTGCGACCGACGCTTGCTGCTCCAAAGACAACCACGACCCCTG
CCGCTCCCTGCACCTCCCCCACTACACTCTAAAACTGCTGTGTTGGCGCC
GCGCTGGGGTATAGTATGCTGTTTTCGGCAACCGCCGTTGTACCGAACAG
ACAGCAATGCGTTTAGTGTATTATTTAGTCGCATGTATCTAGGCTCCCCG
TCATTCTTAACGGTCTCGTCTGTTGCGCTGTTTCACGTGCAATGTTGTGT
CCGAAGGTCCGAGCAGTTGTGCGGTCACATCTCAGAAAACCATTATCCGG
CACCGGAACCGGCAGCGACGGGGGCCGCCGCGGGGCAGGCGGGTTGCAGA
TGCTGTGGTCGGGGGGCAGGCGTACAAAAGGGAACGAGGTGGGAGTTCGC
TTCGCTTTTGGCGTCTTTTTTGCTTTGAGAGGCTGAGCCGTTGCGAGCTT
TTCGTCCGCGCATGTGTTCTTTTTCTCTCGTCCTCGCGAAGAATGCCAAC
CTGTATTTTCTCTCTCTGTGTCGAAACGTCCACCAACTCTTGTTAGTCCC
CGCGCAGTTACCACGGTTCCAAGAGAGAGACACGTTATTCGTATTTCGTT
GCTTTTCCCTTAAGCGGGTCGATCGAACGGCAGTCATGCGACGGTATTGT
TCGTTTTTCCTGCAGGTAATGTTGCATTTCAGCATCGATAGGAACAGAGC
TCGCGAGGCATTCGCGAAATAAGTTATCGTAGGAACTCACAAGTGGAGTG
TTGCCGCTTGATGCAGCCACACCAGCCAAACCATTATGTATTATCCCCCC
CCCCCGCAATCGGCTCAAAGAAAACACCCCCTCTCCTCCTTTCCACCCCG
CACCCTCGGCGCTGGCAGGTAACGGTGAATATCGAGCGCACAAGCATGAA
TTCCCGCCGAATATCCGGGAGCATTGTCATCAACCGTCCGATTGAGGTAA
GCCGGTGTTATTTGCAGCGAGGAAACCTTCCAACCGAAAGGCCTCCAATT
ACGGCTCAGCCACGGCACACACGCTTTTTTTTTCAGGTCGGCCTCGCAAC
TTGCACTCCAGCTCTTGCTCTTTTATTTCATTATATAATCTGTCCATTTC
GATGAACGAGTTGTCCACGTCCCTTCCTCGCAGGCATTTTGGACGAGTCA
GATTATTGTAGGCTTTGCGTTTTCTGCGAGTGTTTTTTTTCGAAACGCCA
ATGTGTGCTGGCAGCCCTCTCCGCCATTAACTTAGTTGTCTCGCGAAGCG
CGTTGCGCACAGCGCATTTGACGTATGAATAGCAATAGTTACAACGCTCA
TGTATCAGCTTTTGTTTGTTGCCTGGAAGTCGGTAGCACCTGGGTGAAGG
CCCCTCTCCAGTGTACACCGGCCGTGTACCGAGCTAGGGCTTGCGACTTG
GGGACAGGCGTATGGTTGGAGGTGATGATTGCAAAGCGGGACTGCTGTGT
GTTGCCCCAGCCGTTTTTTTTGTCTAGTCCACGCCAAGCAAGGTCATACT
CTATTTACTTTGCTGGCGGCTCCGTACGTCATGAAGCAGGTGGTTCAGTA
CACACACAGCCACTTTGCGCCTTATAATCCGCCCGTGATTTGTATGTCAA
GAAATCTCAATTATTTGGGCGACCTCCTCGCCCCGGCATTGTCATCTGCA
AACACGCCTCCTCTCAGGATGTGTGGCTGACGCTGACAGACTACGACCGG
CTGGCGGAGTACGTGCCGAACTTGACCCAGAGCGAGACGAAGCCCAGCGA
TAACGGGAAGATCAGGCTGTGGCAGGAGGGGGCCCAAAAAATCGTGGGGT
TTGACTTCCGGGCGTCGGTGGAAATGTTCATGGACGAACACTACGGTGAG
TACAAACGTCGAAGCGCCAGTCCCCCCCCCCCCCCCCCCCCCCGTTTGTG
GCTTCCTCTTGTTCACATTTTGTTCGCTTTGCCGAAGGACGGGTATGGGC
CGGACGATCTTGCTTCCTCGGATGTAACTAGCGTGCGAAGGGTTGGTATG
AAGCTGTGCGCGTCAAGCCGAAATGCTCACGTTTTATCCACGTATGGTAT
TTGCCGCTCCACTGCTCCACTGCTGCCGTATGCCGTGTGTGTCTGTCCTG
CTCTCTCGACAGGCGACCCAGAAAACCGGATGGCGCAGCGGAAGCTGACG
TTCGGGTTGCTCGACTCCCGGATGTTCAACGAGTTCGATGGGGAGTGGAG
AATGCAGTTCAACAGTCGCAAGGTGTGCGTGTGCGTGTGCTTGTGCATGT
ACGTGCCTGCGTGTTTGCTCTTTCTTGCGGAGACCGTACCAGCCAACGCG
GGCGGCACACGCACGACTCCCCCCCCCCCCACCAAAACCTGAAACCCTGA
AACTCACGGCCTTTCCTCCCTTACCTCCCGTCGGTGCTTTTTGAACACAA
CACATCACACACCAGCAAACCAACGGACCCCAGGGCTTAGATTACCAGTA
CACGACGAAGCTGTTCTACATGGTGCACATCAGGCCGAAGGGCCCCGTGC
CCGTCCTTGCGCTGGAGTGGCAGATCTCCAACGAAGTCCCGAACAACCTG
GCCGCTCTCAAGAAGGCCGCCGAGAGGGTGACGCCGGAATACATTGAGGT
GAGCTGGCGCGGAGCAGGGAGGGGCGCGGAGAGCACCAGTGTGGACGGCA
GACGAAAACGACAGAGACATTAGCGGCATGGGGGTTAGGGATGCCAGCCT
CGTGGACGGGGGGCGTCGGACGGGGGCCCCGTCCGTGCAGGCTTGAAAGC
TTTCCTTCTGAACACGCCCCCCTCCCCCGCCAGTTATCTGCGGGGTGGCG
TTGTTTTAGTATTTGTACTTTGCTTTGTTTTGTTGCGGACTGCAGTGTGC
TCGGGCATGCGAAGCAGACCCCTGACCAGCTGTTCTTGGTAATAGGACCA
GCCGTCGCCCGGGCATACAAGTGCTTGTGTTTCGTGTTAAGTTTACCGGC
ATCAACAATAGCTCTATATTTTTTTTATGCTGCGGACTAAATTTGCGTTA
CTACATTCTAGCAGCGCGTGTCATAGACCATTAGATATACACACAAATAG
TGGAAGAGTTGTAATTTTTTCAAAAAGTGCTCTCTCTGCATGCAGCCAAG
GGCAAGAACCTCTGCTTAACCTCTTCGGACCCGTTCTCCCTCCCCCGATT
CTCTGTTCCCCGCACAAGATGCGACGGAAGGAGCGCGAACAGGCGGCCGT
GGGTCCGGCGATGGGCGCAGCAGCATCTTTGGCTTCGGACGCCGAGAGTG
TCCAAGAGAACTCCGCCGTTAAGATGGGCGCCGAGGCATTCGTTGCAAAG
AACGGCAGCGGGGGCTACGGGCAACCCGACTGGGAGTCAGACGAGACCCT
GGAGGCGTACCTCTCCTCGTAGTGTATGCATTCCCGTGCAGCGGGGGAGT
GGGCGGAGGGGGGCTCGGTGTGTTTTCGCTGGAGAGAGCAGTCGTGACTC
CGTGCTTGGTTTGAGAGGGATCTATAATAGTGTGGCCGTCATTTGATGTG
GTTTCCTTTCTGTTGGTGTGAAGGCAGGGCCCAGGGTGGCGCGGTCAACG
GTCGACGTTGCGGCGTAGGGCTGATAGGTGGGTGGTTGGTCTGTTTGAGA
GCTTTGGGTGAGGCCGAAGATGCGGAAGATTCGCCTAGAAATTATATAGT
TCGCTGGCGGACGTCGTCTCCTAAACTCAGCACAAGAAGCTTACAGGCTC
CGTCCGGAATCCAATCTCCCCGCGTCCCCTTGTGTGTGTAGTTTTGGTTT
TATTTTTTTAGTTCCTTCTTCGTTGCCCACCTCTGTACAGTGTGGCACAG
CTGTGATGGCGCTGTTGTAGCGTTGGAAAGGGGGCGTGTTGCGATTCGCG
AACATGTTGGATTGCTAAAAAAACGGTGGTCACATCTGACGCCGTGGTTC
TTTGTTGGCGCTGCCTGTGGCGGAGAGGTGAAATTCTGCCTGGCGTGCTG
GTGCTCTCGGGGGGTTCCCATAGAACTCGATGGAACGCTGGTGTGATTCG
CCATGAATGTGTTGATGAGCTGGTCCAAGGTGACGTGGAGTTGTCCGGGG
TAATAAATAAACATGATTTTTAATCGCAGCGTTCTTGGCCTTCAAGACGT
GCTGCTGTAGCTGCTGCGCTCAGGGTCGGCGCGGGTCCATTGGTGAAGTG
TTGATTCCCGGCTGGTGAGAACAGCACCGTGTTTGTTGTTCGCGGCTCGT
TCTGTAAGGAGTAGAACACTTTGGCTGTGGAATCCTCGTATGTGTATAGG
GAGTTGGGCTTGGATACCCGTGATAATTAGAGGAGAGGCGGGGGTGTACC
AAGAGAGTAGAAGGAGGAGGACAAGGAGCAACATATACACCCACAATTTG
GTTGGTTCAGCACGGGCGGAAATGGTGCAGAGTACCGAGTAGGAGATACA
CGCGTAGAGCGTGCAGAACATGGAACCAGAAAACGTTTTCCCGCGTGTAC
GCCGGTCGCCCCGGTCGGTGGTTTAACTTCGAACCTACTAGCAGCAAAGT
GTGAGTTCAATCCCAAGCAGAAGTGTTTCTTTTGCGACTTTGCAGGTGAA
AGCGATAAAAACTGAAAAGCTCATGAGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig506:19425..25102+

>mRNA_L-elsbetiae_contig506.13091.1 ID=mRNA_L-elsbetiae_contig506.13091.1|Name=mRNA_L-elsbetiae_contig506.13091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2142bp|location=Sequence derived from alignment at L-elsbetiae_contig506:19425..25102+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTGAGAGCATGCGAAGGAGGAGAGAGGGGCCGGCTGATGGGTCGGG
AGCACGGCTGGTCTCGGCGGTGCTAGTGACATCCCTCCTGCTGAGCTGGA
TGCCAGCCACCTCTACCACCAGTGCGTTCGTGGTCCCAGCCCCTGCGGCG
GCGGGGAGCTTCTGCGGCGAGTGCAGCAGCAATCAGATGCCTGAGAGCAT
GCGAAGGAGGAGAGAGGGGCCGGCTGATGGGTCGGGAGCACGGCTGGTCT
CGGCGGTGCTAGTGACATCCCTCCTGCTGAGCTGGATGCCAGCCACCTCT
ACCACCAGTGCGTTCGTGGTCCCAGCCCCTGCGGCGGCGGGGAGCTTCTG
CGGCGAGTGCAGCAGCAATCAGGTCCGAGCAGTTGTGCGGTCACATCTCA
GAAAACCATTATCCGGCACCGGAACCGGCAGCGACGGGGGCCGCCGCGGG
GCAGGCGGGTTGCAGATGCTGTGGTCGGGGGGCAGGCGTACAAAAGGGAA
CGAGGTCCGAGCAGTTGTGCGGTCACATCTCAGAAAACCATTATCCGGCA
CCGGAACCGGCAGCGACGGGGGCCGCCGCGGGGCAGGCGGGTTGCAGATG
CTGTGGTCGGGGGGCAGGCGTACAAAAGGGAACGAGGTAACGGTGAATAT
CGAGCGCACAAGCATGAATTCCCGCCGAATATCCGGGAGCATTGTCATCA
ACCGTCCGATTGAGGTAACGGTGAATATCGAGCGCACAAGCATGAATTCC
CGCCGAATATCCGGGAGCATTGTCATCAACCGTCCGATTGAGGATGTGTG
GCTGACGCTGACAGACTACGACCGGCTGGCGGAGTACGTGCCGAACTTGA
CCCAGAGCGAGACGAAGCCCAGCGATAACGGGAAGATCAGGCTGTGGCAG
GAGGGGGCCCAAAAAATCGTGGGGTTTGACTTCCGGGCGTCGGTGGAAAT
GTTCATGGACGAACACTACGGATGTGTGGCTGACGCTGACAGACTACGAC
CGGCTGGCGGAGTACGTGCCGAACTTGACCCAGAGCGAGACGAAGCCCAG
CGATAACGGGAAGATCAGGCTGTGGCAGGAGGGGGCCCAAAAAATCGTGG
GGTTTGACTTCCGGGCGTCGGTGGAAATGTTCATGGACGAACACTACGGC
GACCCAGAAAACCGGATGGCGCAGCGGAAGCTGACGTTCGGGTTGCTCGA
CTCCCGGATGTTCAACGAGTTCGATGGGGAGTGGAGAATGCAGTTCAACA
GTCGCAAGGCGACCCAGAAAACCGGATGGCGCAGCGGAAGCTGACGTTCG
GGTTGCTCGACTCCCGGATGTTCAACGAGTTCGATGGGGAGTGGAGAATG
CAGTTCAACAGTCGCAAGCAAACCAACGGACCCCAGGGCTTAGATTACCA
GTACACGACGAAGCTGTTCTACATGGTGCACATCAGGCCGAAGGGCCCCG
TGCCCGTCCTTGCGCTGGAGTGGCAGATCTCCAACGAAGTCCCGAACAAC
CTGGCCGCTCTCAAGAAGGCCGCCGAGAGGGTGACGCCGGAATACATTGA
GCAAACCAACGGACCCCAGGGCTTAGATTACCAGTACACGACGAAGCTGT
TCTACATGGTGCACATCAGGCCGAAGGGCCCCGTGCCCGTCCTTGCGCTG
GAGTGGCAGATCTCCAACGAAGTCCCGAACAACCTGGCCGCTCTCAAGAA
GGCCGCCGAGAGGGTGACGCCGGAATACATTGAGATGCGACGGAAGGAGC
GCGAACAGGCGGCCGTGGGTCCGGCGATGGGCGCAGCAGCATCTTTGGCT
TCGGACGCCGAGAGTGTCCAAGAGAACTCCGCCGTTAAGATGGGCGCCGA
GGCATTCGTTGCAAAGAACGGCAGCGGGGGCTACGGGCAACCCGACTGGG
AGTCAGACGAGACCCTGGAGGCGTACCTCTCCTCGTAGATGCGACGGAAG
GAGCGCGAACAGGCGGCCGTGGGTCCGGCGATGGGCGCAGCAGCATCTTT
GGCTTCGGACGCCGAGAGTGTCCAAGAGAACTCCGCCGTTAAGATGGGCG
CCGAGGCATTCGTTGCAAAGAACGGCAGCGGGGGCTACGGGCAACCCGAC
TGGGAGTCAGACGAGACCCTGGAGGCGTACCTCTCCTCGTAG
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