mRNA_L-elsbetiae_contig4992.12988.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4992.12988.1
Unique NamemRNA_L-elsbetiae_contig4992.12988.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: D8LL92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL92_ECTSI)

HSP 1 Score: 443 bits (1139), Expect = 2.230e-153
Identity = 237/343 (69.10%), Postives = 259/343 (75.51%), Query Frame = 1
Query:   31 AAALLTGTLPGPSNVYGFVVCPKVA-CRSSSXXXXXXNKTGRRVHVAHRAINDAKDFPPTEKPRPAERNFISILSEDGPEQALPVAFASTFPLWVIDGE--VDRAGRKQVTQVPGASEELGWVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEPVGRAAAGSLFLSAYVEERVEGSETDSIWGSLAEKVPVADAFTDIVSVLADPPEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELG--GVRGVAALGFDVFSVANGGESEFLPEVYRPFFKPEE 1044
            A   L GT    S  +GF+V PKV   R S           RR          AK  P  E+ RPAER FISILS DG EQ LPVA AS+FPLW IDG+  VD AGRK VTQVPG + ELGWV+PRSY+ELW+PEGSPAPAMKLCLGMLMKDG+PRYVMPMVDLVV KGGR WRNR LNSVP+AHTWEPV RAAAGS+FLSAY EERVEGSETDS+WG++AEK+PV DAFTDIVSVLADPPE LD+GSGFH +    + P S    G G  SV  +A A  GGRVRVFLSDVSEP DLLDLEE+G  G+RGVAALGFDV SVANGGESEFLPEVYRPFFKP E
Sbjct:    3 APVALLGTFTVLSTAHGFIVRPKVVHSRRSGGAERTCRACSRR---------QAKGQPAIERERPAERQFISILSADGTEQRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHVLVAEVAVPGS----GPGGSSV--VAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFFKPGE 330          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A6U1NKJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NKJ8_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.850e-43
Identity = 93/260 (35.77%), Postives = 145/260 (55.77%), Query Frame = 1
Query:  274 LPVAFASTFPLWVI-DGEVDRAGRKQVTQVPGASE---ELGWVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEPVGRAAA--GSLFLSAYVEERVEGSETDS-IWGSLAEKVPVADAFTDIVSVLADPPEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFF 1032
            LPV + ST+P+W + D   D +   +++ VPG S    E G+VDPRSY   W+PE SP   ++  +  ++KDG PRY+MP +D+  +K G+ WRNR LNS+P+A  WE     A     L LS +    VEG E ++  W ++AEKV + D    +V+++ADPPE  ++ SGFH + +              AD+   L V +    +R F++D  +P  +L+L  +G     + L   +  + + G+SEFLP+VY P +
Sbjct:   69 LPVGYTSTWPVWALEDTPSDGSSNCRLSAVPGTSSGEGETGFVDPRSYHLFWVPEDSPPLLLRPAVVAVLKDGKPRYIMPGLDITAEKAGQVWRNRGLNSLPLAGQWESFLDTALDLSKLTLSVFARHPVEGEEGNTNAWTTIAEKVNLLDTLDRLVAIMADPPE--EISSGFHVLIMPI------------ADTT--LQVPSGTNNMRAFITDYPDPKRMLELPSMGSDG--SELDIQIEKILSAGKSEFLPQVYAPLY 310          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A6V1VC31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VC31_HETAK)

HSP 1 Score: 158 bits (400), Expect = 2.110e-42
Identity = 100/280 (35.71%), Postives = 155/280 (55.36%), Query Frame = 1
Query:  226 ERNFISILSEDGPEQALPVAFASTFPLWVIDGEVDRAGRKQVTQVPGASEELG---WVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEPVGRAAAGSLFLSAYVEERVEGSETDSIWGSLA--EKVPVADAFTDIVSVLAD-PPEGLDLGSGFHFVFL-----AASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFF 1032
            ER  ISIL   G  + LP+++AS +P+W+++ E   A      +VP A EE G   WVDP S+++LWIP  SP P ++  L +L+KDG PRYV+P +D  +++GGR WRNR + + P+AH W+         L +S Y  +++  +  DS W   A  E++    A   +++++ + PPE   + +GFHFV       AA  P + Q                   R+RVFL+D+ +P+ LL+LE+ G   G   L  +V  +A  GES+++P+VYR  F
Sbjct:   46 ERQSISILGS-GRMETLPLSYAS-YPVWMMEPEGGLA------RVPDAPEEEGGAAWVDPFSFSDLWIPMDSPQPMLRPTLMVLLKDGNPRYVLPGLDTFLEQGGRRWRNRGMRTFPMAHVWQLFLAVPPEFLKISVYTNQKIPDTINDS-WEKFADCEELGAVGALDAVLALVGEGPPE---IKNGFHFVAAPLPVPAAPIPQNCQ-------------------RIRVFLNDIEDPIRLLELED-GAETGGGVLDVEVTEIAPAGESQYIPDVYRQLF 293          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A7S0ERZ3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ERZ3_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 3.390e-28
Identity = 90/311 (28.94%), Postives = 137/311 (44.05%), Query Frame = 1
Query:  232 NFISILSEDGPEQALPVAFASTFPLWVIDGEVDRAGRKQVTQVPGAS---EELGWVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVVDK----GGRSWRNRSLNSVPIAHTWEPVGRAAAGSLFLSAY---------------------VEERVEGSETDSI-------WGSLAEKV--------PVADAFTDIVSVLADP-PEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFF 1032
            N + I S  G    LP+A    +PLW+   +        VT++ GA    EE GWVDP S+ +LW+PE  P P+  L + +++KDG+PRY++P ++  +       G  W NR LNSVP+   W   G A   +  L ++                       E     E D+        W  L            PV +A   I+ VLA+   E  ++G G+HF+        +A+V G       P     PG ++R+ L+   +  +  D E  G +   A     V+S+  GGESEF+PE Y+P +
Sbjct:   21 NMVKISSIKGGSGQLPLAMCR-WPLWIASAD-------HVTKLSGAGGDEEEAGWVDPISFEQLWLPEDLPLPSSHLAVSLVIKDGVPRYLLPCIETSITTVSGVSGTVWHNRGLNSVPLGAQWMAWGEAPLKAYRLFSFGSDFKPPAPPPARRHPRGARAAAEEGAAEEADTAEEELPPAWEPLQVMADRPGGGGQPVEEALGSIMRVLAEAGAEIKEMGEGYHFI--------TARVDG----GALPADTVRPGRKLRLILATALDDPNPNDEEWEGEMLSFARCDTTVYSIPAGGESEFMPECYKPLY 311          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A7S2EFX4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EFX4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.770e-23
Identity = 79/249 (31.73%), Postives = 118/249 (47.39%), Query Frame = 1
Query:  220 PAERNFISILSEDGPE-QALPVAFASTFPLWVIDGEVDRAGRKQVTQVPGAS-EELG--WVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVV-DKGGRSWRNRSLNSVPIAHTWEPVGRAA-AGSLFLSAYVEERVEGSETDSI---------WGSLAEKVPVADAFTDIVSVLADPPEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPL---AVAAPGGRVRVFLSDVSEPVD 912
            P +     I   +GP+ Q + V +AS++P+W +         + VT+VP AS +ELG  WV P S+ +LW+P   P P     LG+++KDG+PRY  P V+ ++  + G +W NR LNS+P+A TW P      A +L L+ Y    +   E D           W +   +  V  A   + + +A+ P  L  G    F +L    PSS        D+ S     +   PG RVR  LSD+    D
Sbjct:   56 PKDPTVHKIKIAEGPKGQTIAVNYASSWPVWYVTHN-----GQSVTRVPDASSDELGGGWVSPSSFEQLWLPMDLPPPTASAALGLVLKDGVPRYAFPTVETILATRDGGAWHNRGLNSLPLAKTWMPFFNVVNADTLSLACY-HRSMPTEENDXXXXXXXXXEEWKAAFPRTDVKGALDLLFNAIANGPNELSEG----FCYLVTPLPSS--------DAQSAFLTKSAVIPGQRVRCLLSDLDTMPD 286          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A7S4R144_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R144_9STRA)

HSP 1 Score: 103 bits (258), Expect = 5.660e-22
Identity = 89/273 (32.60%), Postives = 131/273 (47.99%), Query Frame = 1
Query:  220 PAERNFISILSEDGPE-QALPVAFASTFPLWVIDGEVDRAGRKQVTQVP-GASEELG--WVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVV-DKGGRSWRNRSLNSVPIAHTWEPVGRAA-AGSLFLSAY-----VEERVEGSET--DSIWGSLAEKVPVADAFTDIVSVLADPPEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELGGVRGVAALGFDVFSVANGGES 999
            P +     I   +GP+ Q + V +AS++P+W +         + VT+VP G+S+ELG  WV P S+ +LW+P   P P     LG+++KDG+PRY  P V+  +  + G +  NR LNS+P+A TW        A +L L+ Y      EE  E  E   D  W +   +  V  A   + + +A+ P  L  G    F FL    PSS          +S  AV  PG  VR  LSD+    D  D +++  V  +      V +VA GGE+
Sbjct:   31 PKDPTVHKIKIAEGPKGQTIAVKYASSWPVWYVTHN-----GQSVTRVPDGSSDELGGGWVSPSSFEQLWLPMDLPPPTASAALGLVLKDGVPRYAFPTVETALATRDGGARHNRGLNSLPLAKTWLQFFNVVNADTLSLACYHRSMPTEENDEDDEQKQDEEWKAAFPRTDVKGALDLLFNAIANGPNELSEG----FCFLITPLPSSDTQPA----FLSKQAVI-PGQCVRCLLSDLDTMPD--DDDDMRAVCDIL-----VHNVAPGGEN 282          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A448ZAV6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAV6_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.220e-19
Identity = 78/288 (27.08%), Postives = 135/288 (46.88%), Query Frame = 1
Query:  205 TEKPRPAERNFISILSED---GPEQALPVAFASTFPLWVIDGEVDRAGRKQVTQVPGASEELGWVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEPVGRAAAGS------LFLSAYVEERVEGSETDSIWGSLAEKVP---VADAFTDIVSVLADPPEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFF 1032
            +++P    +NF+ I S +   G +++LP +F   +P W ++ +     R Q  +  G    LG+V P S  +++ P     P +KL +G+ ++ GI R+V+P +D+   KG  + RNR L SVP+AH W   G  ++ +      L LS+   +R      + IW  L+  +P   +A A    +  LA+      LG G H + +A              D    L +  P   VRV + +V +  +  D+E       +  L   + +  +G +SE+LPE Y+P +
Sbjct:   34 SDEPEVVSKNFVEITSLNNFGGRKESLPASFIERWPNWFLENDGTLL-RIQDEETAGG---LGYVTPTSIDQIFQPVDLKRPEIKLAVGIHVRSGIIRHVLPALDISYGKG--THRNRGLCSVPLAHNWVDFGYLSSLADYNRYQLILSSAKRQRSSDXVDNRIWDKLS-SLPGNAIARAIERAIVCLAEEDSDA-LGEGSHIIHIAL-------------DDAKVLEMPKPKNDVRVTMVEVGDEGEQ-DIE-------IGILDVAIVTAMSGSDSEYLPEAYKPLY 292          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A7S0JIP9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JIP9_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 5.360e-16
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 1
Query:  448 KLCLGMLMKDGIPRYVMPMVDLVVDKG-GRSWRNRSLNSVPIAHTWEPVGRAAAGSLFLSAYVEERVEGSETDSIWGSLAEKVPVADAFTDIVSVLADPPEGLDLGS-GFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEE 930
            ++ LGM++++G PRY+ P +D  ++   G +WRNR LN+VP+A TW   G + A SL LSAY+    + +  + I+G      PVA A       L + P  L   S G  F FL    P   +     ++   P    APG R+RVFLSD+ + + L + E+
Sbjct:    1 RIALGMVLRNGEPRYIFPALDTYIETADGMAWRNRGLNTVPLAKTWLHYGESPADSLRLSAYISSCPD-APAEQIFGHR----PVAAALDAACESLENLPPLLKRSSLGDGFCFLLCPLPDLPE-----SEQFLPARALAPGTRLRVFLSDIEKDILLPNTEQ 153          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A0M0K6T8_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K6T8_9EUKA)

HSP 1 Score: 80.5 bits (197), Expect = 5.080e-14
Identity = 64/228 (28.07%), Postives = 100/228 (43.86%), Query Frame = 1
Query:  451 LCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEPVGRAAAGSLFLSAYV--EERVEGSETDSI---------------------------WGSLAEKVPVADAFTDIVSVLADPPEGLD---LGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSE-PVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFFK 1035
            + +G+++++G PRY+ P +D  +D  G+ WRNR + SVP+A TW   G + A +L LS++V      EG  T +                            W    +   V DA  +  + L + P+ L    LG GF   FL A  P           ++ P     PGGR+R+ LSD+ +   D  D  E     G   L   +++V  G +S +LP  YR  ++
Sbjct:    1 MAIGLVLRNGEPRYIFPTIDTYLDAAGKRWRNRGIFSVPLAKTWLHYGESPADNLRLSSFVIAPTLAEGDATAAPTAXXXXXXXXXXXXSKASGRTWERFGQWEQCMDHQQVLDALDEAFAALDNLPDALSRTSLGQGF--CFLIAPLPDKG--------AMLPETALRPGGRLRLLLSDLEDWGTDGNDGREPAWQYGDCELS--MYTVPPGRDSPYLPTPYRELYE 216          
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Match: A0A7S4NHR9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NHR9_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.260e-5
Identity = 68/273 (24.91%), Postives = 110/273 (40.29%), Query Frame = 1
Query:  223 AERNFISILSEDGPEQALPVAFASTFPLWVIDGEVDRAGRKQVTQVPGASEELGWVDPRSYTELWIPEGSPAPAMKLCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEP---VGRAAAGSLFLSAYVEERVEGSETDSIWGSLAEKVPVADAFTDIVSVLADPPEGLDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVSEPVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFF 1032
            A+ N      + G  + +P +    +P WV+  +      K+ +++    ++ G+++P S  EL+ P     P M+L LG+ +++G  R +MP VDL      R   NR L+SVP A  W     +  +  G + +   +++     E  S    +   +  A     I  ++ +PP+    GS    V L               D VS        G   V    +S+  D         VRG   L   V +   G +S FLPEVYR  F
Sbjct:   43 ADENIQIYKPQAGTFEKIPESPTLAWPTWVLYAD------KKESKLVRIPDDRGFLNPVSGEELFQPLDLIEPEMRLALGLHIREGAIRQIMPAVDLSFR---RVHHNRGLSSVPRARQWVDFVNIDWSEFGMVIMQRKLKDGDNSLEVISAGNPVKPYIDHA-----IKYLVENPPDEWSKGSQIVHVVLD--------------DEVSKRMEGIKTGHELVVA--LSQGTD---------VRG--QLSVKVKATEAGSQSAFLPEVYRDLF 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4992.12988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LL92_ECTSI2.230e-15369.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U1NKJ8_9STRA3.850e-4335.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1VC31_HETAK2.110e-4235.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0ERZ3_9EUKA3.390e-2828.94Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2EFX4_9STRA5.770e-2331.73Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S4R144_9STRA5.660e-2232.60Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZAV6_9STRA9.220e-1927.08Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0JIP9_9EUKA5.360e-1634.97Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A0M0K6T8_9EUKA5.080e-1428.07Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S4NHR9_9STRA2.260e-524.91Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4992contigL-elsbetiae_contig4992:6136..9885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.0
Seed ortholog evalue1.6e-122
Seed eggNOG ortholog2880.D8LL92
Hectar predicted targeting categorychloroplast
EggNOG OGs2EA9U@1,2SGID@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-27_001760.1
Exons6
Model size1056
Cds size1056
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4992.12988.1prot_L-elsbetiae_contig4992.12988.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4992 6136..9885 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816500.698581-CDS-L-elsbetiae_contig4992:6135..64141622816500.698581-CDS-L-elsbetiae_contig4992:6135..6414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 6136..6414 -
1691683604.8604329-CDS-L-elsbetiae_contig4992:6135..64141691683604.8604329-CDS-L-elsbetiae_contig4992:6135..6414Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 6136..6414 -
1622816500.7096539-CDS-L-elsbetiae_contig4992:6953..70151622816500.7096539-CDS-L-elsbetiae_contig4992:6953..7015Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 6954..7015 -
1691683604.8735418-CDS-L-elsbetiae_contig4992:6953..70151691683604.8735418-CDS-L-elsbetiae_contig4992:6953..7015Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 6954..7015 -
1622816500.7201512-CDS-L-elsbetiae_contig4992:7516..77431622816500.7201512-CDS-L-elsbetiae_contig4992:7516..7743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 7517..7743 -
1691683604.8823383-CDS-L-elsbetiae_contig4992:7516..77431691683604.8823383-CDS-L-elsbetiae_contig4992:7516..7743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 7517..7743 -
1622816500.733532-CDS-L-elsbetiae_contig4992:8244..83311622816500.733532-CDS-L-elsbetiae_contig4992:8244..8331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 8245..8331 -
1691683604.8909652-CDS-L-elsbetiae_contig4992:8244..83311691683604.8909652-CDS-L-elsbetiae_contig4992:8244..8331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 8245..8331 -
1622816500.7435246-CDS-L-elsbetiae_contig4992:8966..91151622816500.7435246-CDS-L-elsbetiae_contig4992:8966..9115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 8967..9115 -
1691683604.8995085-CDS-L-elsbetiae_contig4992:8966..91151691683604.8995085-CDS-L-elsbetiae_contig4992:8966..9115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 8967..9115 -
1622816500.7535899-CDS-L-elsbetiae_contig4992:9633..98851622816500.7535899-CDS-L-elsbetiae_contig4992:9633..9885Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 9634..9885 -
1691683604.907699-CDS-L-elsbetiae_contig4992:9633..98851691683604.907699-CDS-L-elsbetiae_contig4992:9633..9885Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4992 9634..9885 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4992.12988.1

>prot_L-elsbetiae_contig4992.12988.1 ID=prot_L-elsbetiae_contig4992.12988.1|Name=mRNA_L-elsbetiae_contig4992.12988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=352bp
MKAAVFELQVAAALLTGTLPGPSNVYGFVVCPKVACRSSSSSSSSSNKTG
RRVHVAHRAINDAKDFPPTEKPRPAERNFISILSEDGPEQALPVAFASTF
PLWVIDGEVDRAGRKQVTQVPGASEELGWVDPRSYTELWIPEGSPAPAMK
LCLGMLMKDGIPRYVMPMVDLVVDKGGRSWRNRSLNSVPIAHTWEPVGRA
AAGSLFLSAYVEERVEGSETDSIWGSLAEKVPVADAFTDIVSVLADPPEG
LDLGSGFHFVFLAASWPSSAQVHGAGADSVSPLAVAAPGGRVRVFLSDVS
EPVDLLDLEELGGVRGVAALGFDVFSVANGGESEFLPEVYRPFFKPEEES
A*
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mRNA from alignment at L-elsbetiae_contig4992:6136..9885-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4992.12988.1 ID=mRNA_L-elsbetiae_contig4992.12988.1|Name=mRNA_L-elsbetiae_contig4992.12988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3750bp|location=Sequence derived from alignment at L-elsbetiae_contig4992:6136..9885- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGCGGCCGTATTCGAGCTGCAAGTAGCCGCAGCGCTGTTGACTGG CACATTGCCGGGACCATCAAACGTTTACGGGTTTGTGGTTTGCCCAAAGG TAGCGTGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAGACTGGA AGACGTGTTCATGTTGCACACCGTGCGATAAACGACGCCAAGGACTTTCC GCCCACAGAGAAACCACGACCAGCGGAGCGAAACTTCATCTCCATATTGT CGGTACAGTTTAGGGTCTACGCACGCCCGTTCCCTCGTTGAAAAGCTGAG GATGACACCTCCTTACGGTCAATACCACCCCCCTGTTGAACACCAAGATC AGCTGAAAGCTGTGCGATGGTGCAAGATCTAGACTAGTCCTAGATACGTT CGTATTTCTTATCATCATGAGCGTACGTATGGTGCGGTAGGTTTCTCTAT GCATGGTTACTACGTGTCTCCGTTGGTGTGTATGGTTTCTCACGAGGGGG GTCAGGCATGGTTTTCCTATGTACACCAACCAGCCCGAGAGCTAACATAT GATCAGGGTTTGTGGTATATTCTACGCGTGCCTCAGCCGAGACCGCACTT TGTTCCTGGAGGGCAGACAGAAGCAACAAACACGAAAAACACCCGGAGGC GACGTCGGCACGAATACACCTTCCTCCCACCCTCTTGAATCAACATCAGC AAACCCGGAATCGATCAACCACCCACCCGCTCGCCCTGCTTATTTTCTCT CCCGAAACAACAACCCCCAGGAAGACGGGCCGGAGCAAGCGCTCCCGGTG GCTTTCGCCTCTACCTTTCCGCTGTGGGTCATCGATGGGGAGGTGGACCG TGCTGGGCGGAAGCAAGTCACACAGGTCCCTGGGGCGAGCGAGGAGCTTG GCTGGGTAGACCCAAGGAGGTGTGCTGTGTTTTTGCAACCATGTACTGCG ATGTAGGAGTACTTCGTGCCGGTCGCGAGCCCCGCTCGCAGGATTAGGCG CACGTTTCGAGTAACGTCTGTCTGAGGAAGACGAAGAAAGGGTCGCACTA ATGGGCGTAGCGCAGTTGTGCGTTGCTCTGGCGAAGAGTGCGGGCGTCGT CGGCATTTTGCTACAACTTTTACATATAGACTATGTATGTACCATGCGTG GTTTAGTTAACTGCAGCCTTTGTTGTATGGTAGATGATTTGTTTTTAGGG GGGCATGCTTTGCTCTACGCGTTTATGCAGGCGCTCACGAAAGGCCGGCA TAACAGCTTGCTTCACGTTGTGGCTGCGTGACGGTCGCTCACACTCCGCA CTCCACTGCCGTCGGTAAACGACAAGACACGGCATCGGGCTTCTTGGTAA GTTTCCCAGCAGGCACGTATTCTGTACTCCAAGAAGGTACACGCCACGCG CTTGGCTTTCCCTGAATTTGAGACTCGGTCGCTTGATCCACTGGGCGCGC GCTGCCTTGCTGCGAGCTAAATTTCCCCCCACATGCCACAAGGCGTAGAA CACGTGTGCTTAGTTCCTTTTTGTACCTACCATATCTGTTTTCCGCGTTC TCAGCTACACCGAGCTGTGGATCCCAGAAGGTAGCCCAGCGCCGGCCATG AAGCTGTGCCTTGGCATGCTCATGAAGGACGGCATTCCCAGGTGCGCGCT GCTGGAGCACTCGCAGGACTAGCCTTACGGCAGCAAACTAAACAGTGAAT AACCCGGGAACATACCCCAGAGTGTCCCCTGCAGCAGCTAATCGCGCCTG AGGGGCTACTTCTGTTCCATGAGCTTGGAGAGAGATCGGCAAAGGCTGAA ACTGAAAGCAAGAACGCCGTTGTATAGAGCTAAACGTGTGGAGAGCTAGC CGATGCGTACCTGATATCGCCGAGTATGACGGCAAGGGGGGAAGGAGAGT AATGAAACAACAGCCGATAGTAGCGCTTGGCCTCCTGTCAAAACCAATCA ACTCCCGTTGGTGCCGTCAGAAAGAGGGGCGCGGCAACGACCGTTCTAGT TGCTGCATCGCAGCCCCTCGAGCCCCCCCCCCTCGTCCCCCCGCGCGCGC CCGCGCCTAGGCTACCCTTCGAGACCGCAACACACGCGCCAACCCCTCGT CTCTTTCAATGCCTCGGTCCAAACCCGAAAACCACCAAAAAGGTACGTGA TGCCCATGGTGGACCTGGTCGTTGACAAGGGAGGCCGGAGCTGGCGAAAT CGGAGCCTGAACAGCGTCCCGATCGCTCACACGTGGGAGCCGGTAGGCCG CGCCGCGGCCGGCAGCCTGTTCCTGTCGGCGTACGTGGAGGAGAGGGTAG AGGGCAGCGAGACGGACAGCATCTGGGGCAGCTTGGCGGAGAAAGTGCCC GTGGCGGATGCCTTTACAGGTGAAGCGGCCCCGTCTCCTGCGCAATTACC ATCTAGCCTGCTGTGTCCACCGATATTGATTTGTTGCATATTAGCTCGAT GAACTGACACCGCCCTACTCCTGGACGAGGGCCTGACTGAGTGGATGCGC TCTCTCGCCACCGCTTTTAGGGAGGGGAACGTTTCGGATACTACCAACAG CTGCAGACGGTTCCGCCCTGGCTGACTCGCGGCTGTCGGGACCTGATGTC CCAGACCCTTTGTTGTTTCTTGTGGAGATAGATCGTGTGCTGTTCCGCCG CTTGCAAAGTGACGTACATACGGGCCAGTCGCCCGTACGGTTGCTGTTAT CCTATCGTTGGCGCAGTTCCCCATCCGGCCACGTGGGCGCGTGTGGCCGG GTCTGGCTCAAACGCTCACGGTAATGGCGTGTGCACACCACGCAGCGATT TTTTAAGCGTTCTCTTCTCGCGCGTTTTATGTACGTATGTACGCCCTTTG CCCCTATCACACCCATGCAGATATCGTGAGCGTTCTGGCAGACCCGCCCG AGGGTCTGGACCTTGGGAGCGGCTTCCACTTTGTCGTGGCCGAGGCGAGT ACACGTTTGGAATTGGCCTTACTTGGCGGCGTGTACCGGCGGCACGCTCG TTGTTTTCGAGCGTGTGCGCGTCCAACAACTCCAGCTAAATTTAAATTTT CAACGAAAGAGGAAGCCGACGAACGGATAGGCGCGCTGCTTGCAGCCCCA AAAGCGCAGCCGGCCGCCAGAAGGGGCTCACACGCTCGTTCACAGTTCAC ACCTACCCCTGCCTACAGCTCATTCGTCCTATTGTACCCATAATGAATTC ACTCGCCGCGCTGTGTGTCCCTTTGTTTCCCTTGTGCACGCGTGTGGCGA CTGGCGGTCGTCTTCGGGACGTCACCATTGCTGCTGTGTCGAGCCCTGCT TTCTCGCGACGCGCAGCTCACATGCGTCCGACCCTGCCTCCTGCTCCTGG CTAAGGAACACACACACACACACACACACCGCCCCGAACCCTAACCCGCG GGTACTCCCAGCGCCCACCCCCCTTTCGACAAAACGAGAGCCCGCCCTCT GAACTACCTGAACAACTGTAGGTTTTCCTCGCCGCGTCATGGCCGTCATC GGCGCAGGTTCACGGTGCCGGTGCTGATTCCGTGAGCCCGTTAGCGGTGG CAGCTCCCGGGGGGCGAGTGCGTGTGTTCCTGAGCGACGTCTCCGAGCCG GTAGACCTGCTGGACCTGGAGGAGTTGGGGGGGGTCCGGGGGGTGGCGGC GCTGGGTTTCGACGTTTTTTCGGTCGCCAACGGCGGGGAGAGTGAATTTC TCCCCGAGGTGTACAGGCCGTTTTTCAAGCCGGAGGAGGAGTCCGCTTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig4992:6136..9885-

>mRNA_L-elsbetiae_contig4992.12988.1 ID=mRNA_L-elsbetiae_contig4992.12988.1|Name=mRNA_L-elsbetiae_contig4992.12988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2112bp|location=Sequence derived from alignment at L-elsbetiae_contig4992:6136..9885- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGCGGCCGTATTCGAGCTGCAAGTAGCCGCAGCGCTGTTGACTGG
CACATTGCCGGGACCATCAAACGTTTACGGGTTTGTGGTTTGCCCAAAGG
TAGCGTGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAGACTGGA
AGACGTGTTCATGTTGCACACCGTGCGATAAACGACGCCAAGGACTTTCC
GCCCACAGAGAAACCACGACCAGCGGAGCGAAACTTCATCTCCATATTGT
CGATGAAGGCGGCCGTATTCGAGCTGCAAGTAGCCGCAGCGCTGTTGACT
GGCACATTGCCGGGACCATCAAACGTTTACGGGTTTGTGGTTTGCCCAAA
GGTAGCGTGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAGACTG
GAAGACGTGTTCATGTTGCACACCGTGCGATAAACGACGCCAAGGACTTT
CCGCCCACAGAGAAACCACGACCAGCGGAGCGAAACTTCATCTCCATATT
GTCGGAAGACGGGCCGGAGCAAGCGCTCCCGGTGGCTTTCGCCTCTACCT
TTCCGCTGTGGGTCATCGATGGGGAGGTGGACCGTGCTGGGCGGAAGCAA
GTCACACAGGTCCCTGGGGCGAGCGAGGAGCTTGGCTGGGTAGACCCAAG
GAGGAAGACGGGCCGGAGCAAGCGCTCCCGGTGGCTTTCGCCTCTACCTT
TCCGCTGTGGGTCATCGATGGGGAGGTGGACCGTGCTGGGCGGAAGCAAG
TCACACAGGTCCCTGGGGCGAGCGAGGAGCTTGGCTGGGTAGACCCAAGG
AGCTACACCGAGCTGTGGATCCCAGAAGGTAGCCCAGCGCCGGCCATGAA
GCTGTGCCTTGGCATGCTCATGAAGGACGGCATTCCCAGCTACACCGAGC
TGTGGATCCCAGAAGGTAGCCCAGCGCCGGCCATGAAGCTGTGCCTTGGC
ATGCTCATGAAGGACGGCATTCCCAGGTACGTGATGCCCATGGTGGACCT
GGTCGTTGACAAGGGAGGCCGGAGCTGGCGAAATCGGAGCCTGAACAGCG
TCCCGATCGCTCACACGTGGGAGCCGGTAGGCCGCGCCGCGGCCGGCAGC
CTGTTCCTGTCGGCGTACGTGGAGGAGAGGGTAGAGGGCAGCGAGACGGA
CAGCATCTGGGGCAGCTTGGCGGAGAAAGTGCCCGTGGCGGATGCCTTTA
CAGGTACGTGATGCCCATGGTGGACCTGGTCGTTGACAAGGGAGGCCGGA
GCTGGCGAAATCGGAGCCTGAACAGCGTCCCGATCGCTCACACGTGGGAG
CCGGTAGGCCGCGCCGCGGCCGGCAGCCTGTTCCTGTCGGCGTACGTGGA
GGAGAGGGTAGAGGGCAGCGAGACGGACAGCATCTGGGGCAGCTTGGCGG
AGAAAGTGCCCGTGGCGGATGCCTTTACAGATATCGTGAGCGTTCTGGCA
GACCCGCCCGAGGGTCTGGACCTTGGGAGCGGCTTCCACTTTATATCGTG
AGCGTTCTGGCAGACCCGCCCGAGGGTCTGGACCTTGGGAGCGGCTTCCA
CTTTGTTTTCCTCGCCGCGTCATGGCCGTCATCGGCGCAGGTTCACGGTG
CCGGTGCTGATTCCGTGAGCCCGTTAGCGGTGGCAGCTCCCGGGGGGCGA
GTGCGTGTGTTCCTGAGCGACGTCTCCGAGCCGGTAGACCTGCTGGACCT
GGAGGAGTTGGGGGGGGTCCGGGGGGTGGCGGCGCTGGGTTTCGACGTTT
TTTCGGTCGCCAACGGCGGGGAGAGTGAATTTCTCCCCGAGGTGTACAGG
CCGTTTTTCAAGCCGGAGGAGGAGTCCGCTTAGGTTTTCCTCGCCGCGTC
ATGGCCGTCATCGGCGCAGGTTCACGGTGCCGGTGCTGATTCCGTGAGCC
CGTTAGCGGTGGCAGCTCCCGGGGGGCGAGTGCGTGTGTTCCTGAGCGAC
GTCTCCGAGCCGGTAGACCTGCTGGACCTGGAGGAGTTGGGGGGGGTCCG
GGGGGTGGCGGCGCTGGGTTTCGACGTTTTTTCGGTCGCCAACGGCGGGG
AGAGTGAATTTCTCCCCGAGGTGTACAGGCCGTTTTTCAAGCCGGAGGAG
GAGTCCGCTTAG
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