mRNA_L-elsbetiae_contig493.12891.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A6H5L731_9PHAE (Glyco_trans_2-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L731_9PHAE) HSP 1 Score: 352 bits (902), Expect = 2.150e-119 Identity = 172/196 (87.76%), Postives = 181/196 (92.35%), Query Frame = 2 Query: 5 TTTSVGGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQA---FCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYGRHPDHVPV 583 TTTSVGGRGPALNAGAR+A GDLLLFVHADTIVPPAFD TLRKAF+DPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTR IHLPYGDQA FCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGG IHV+D+AALC PRRWE+PGN PFVNF +NW+FLFLYSKL FSP +IFRLYYGR PD + V Sbjct: 100 TTTSVGGRGPALNAGARMAKGDLLLFVHADTIVPPAFDVTLRKAFRDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRVIHLPYGDQASRAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGHIHVLDEAALCNPRRWEQPGNNPFVNFWRNWMFLFLYSKLGFSPEQIFRLYYGRDPDPIVV 295
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: D7FSW3_ECTSI (Glycosyl transferase, group 2 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW3_ECTSI) HSP 1 Score: 275 bits (702), Expect = 3.770e-91 Identity = 138/169 (81.66%), Postives = 146/169 (86.39%), Query Frame = 2 Query: 56 IATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYGR 562 +A GDLLLFVHADTIVPPAFD TLRKAF+DP+ILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTR IHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGG IHV+D+AALC PRRWEK G F + +N F LY S +IFRLYYGR Sbjct: 1 MAKGDLLLFVHADTIVPPAFDVTLRKAFRDPKILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRVIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGHIHVLDEAALCNPRRWEK--QGVFRSSLQNICFALLYVVGNLSADQIFRLYYGR 167
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A835ZCJ3_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ3_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.860e-46 Identity = 89/196 (45.41%), Postives = 118/196 (60.20%), Query Frame = 2 Query: 2 RTTTSVGGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKEPF----------GMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYG 559 RT S GGRGPAL+AGA+ A GDLLLF+HADT++P +D LR AFQDP +L+S F FG+NRA+ + G+ ++E + RTR+ PYGDQA C + + +GGFP + MMEDFE VRR + GG I + ALC+PRRWE+ G N+ F+F Y L +SP +I+ YYG Sbjct: 110 RTLESRGGRGPALHAGAQAARGDLLLFLHADTLLPQGYDAALRDAFQDPALLLSCFRFGVNRAVCAARGAXXXXXXXXXXRGLRLLEWAVDRRTRAKSFPYGDQALCTSRVNYFRLGGFPRVPMMEDFEFVRRAKAVAQGGGWGIRQLPLTALCSPRRWEQ--KGVLTVSLLNFSFVFRYVVLGWSPQQIYDRYYG 303
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A7S3PIZ7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PIZ7_9STRA) HSP 1 Score: 151 bits (382), Expect = 5.360e-41 Identity = 84/185 (45.41%), Postives = 107/185 (57.84%), Query Frame = 2 Query: 23 GRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGIN-------RALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYY 556 GRG AL+AGA ATGD+LLF+HADT++P +DE LR D ++LM+ F F IN A R G+ +E TN R R+ LPYGDQA + E+GG + MMEDFE+V R+R+ L GGRI ++ + A C+PRRWEK NG N NW F+ Y SP IF YY Sbjct: 139 GRGQALSAGAESATGDILLFLHADTLLPTGYDEVLRNKLADKKVLMTAFSFEINVENAEDSTASFRN----GIKRLEYFTNIRARNFWLPYGDQALAMRRSAYKEVGGVKRLKMMEDFELVSRVRRIALENGGRIEILPEHAKCSPRRWEK--NGIAKNSVLNWTFVAAYVWAGISPDTIFEYYY 317
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A5A8DKP3_CAFRO (Glyco_trans_2-like domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKP3_CAFRO) HSP 1 Score: 152 bits (384), Expect = 5.640e-40 Identity = 82/203 (40.39%), Postives = 116/203 (57.14%), Query Frame = 2 Query: 2 RTTTSVGGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLR-----GKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYG-RHPDHVPVGVH 592 R T+ GR A N GA A GD++ F+HADT VP +D+ +R +DP +++ F FG++R+ + G P GM +E N+R+ + LPYGDQ ++A++G P +VMMEDFE VRR R + +A G RI V+ Q ALC+ RRWE G P W F+F Y+ L F+ +I++LYYG P G H Sbjct: 106 RVVTTSAGRAQAHNEGAAEARGDIIFFLHADTKVPLGWDKLIRDCLRDPTVVIGAFSFGVDRSSFKPDNRWGGSPTGMGTVEWFANFRSGRLQLPYGDQGIFLLRQRWAQLGPMPSLVMMEDFEFVRRARTQAVAEGRRIAVLPQVALCSGRRWEALGV-PATTLSNQW-FVFAYTALGFTDRQIYKLYYGVEAPTEAGGGSH 306
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A0M0JLK4_9EUKA (Glycosyl transferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JLK4_9EUKA) HSP 1 Score: 149 bits (375), Expect = 7.580e-40 Identity = 85/195 (43.59%), Postives = 117/195 (60.00%), Query Frame = 2 Query: 5 TTTSVGGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKE--PFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYGRHPDHVPV 583 TTTS GGRGPA+ AG R++ GD +L +HADT +P +D + +A DP +LM+ F FG +RA L E P G+A+ME N R+R LP+GDQA T +GG+P+ ++E+F +V RLR AG GRI +D ALC+PRRWE+ +N V L + + +PA++F YYG P VPV Sbjct: 138 TTTSSGGRGPAVAAGTRLSVGDAILVLHADTALPANWDGAVLEALADPTVLMTAFSFGCDRAQLSCPESPPAGLALMEWTVNRRSRWYELPFGDQALATTRATLDAIGGYPETCILEEFILVNRLRAMSAAGLGRILTLDATALCSPRRWERSTVWR-INAVNQAVML--WHRWGATPAQVFEFYYGM-PAPVPV 328
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A5A8E156_CAFRO (Glyco_trans_2-like domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E156_CAFRO) HSP 1 Score: 151 bits (382), Expect = 4.490e-39 Identity = 79/191 (41.36%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 2 RTTTSVGGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLR-----GKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYG 559 R T+ GR A N GA A GD++ F+HADT VP +D+ +R +DP +++ F FG++R+ + G P GM +E N+R+ + LPYGDQ ++A++G P +VMMEDFE VRR R + +A G RI V+ Q ALC+ RRWE G P W F+F Y+ L F+ +I++LYYG Sbjct: 106 RVVTTSAGRAQAHNEGAAEARGDIIFFLHADTKVPLGWDKLIRDCLRDPTVVIGAFSFGVDRSSFKPDNRWGGSPTGMGTVEWFANFRSGRLQLPYGDQGIFLLRQRWAQLGPMPSLVMMEDFEFVRRARTQAVAEGRRIAVLPQVALCSGRRWEALGV-PATTLSNQW-FVFAYTALGFTDRQIYKLYYG 294
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A7S2RVS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVS7_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.350e-38 Identity = 77/184 (41.85%), Postives = 104/184 (56.52%), Query Frame = 2 Query: 20 GGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYYGRHPD 571 GGRGP LNAG R + G +LLF+HADT++P FD +R+A +D E+L + F F ++RA + ME + R+ LP+GDQA T +F +GGFPD+ MMEDFE+V+ LR+ AG G I +D A C RRW K N + N V + Y FSP +I+ YY P Sbjct: 127 GGRGPTLNAGVRASRGGILLFLHADTLLPDCFDALVRRALEDHEVLATAFRFRVSRA--EDTRVAALGWMEWTVHLRSSLYELPFGDQAMAITRQRFDALGGFPDVPMMEDFELVQALRRAGAAGAGYIKTLDAPATCGARRWVK--NKVWWCNAMNQVIMIAYVYFGFSPTQIYTWYYQSTPS 306
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A7S2CQU7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CQU7_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.280e-35 Identity = 74/181 (40.88%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 14 SVGGRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLYY 556 S GGRG L AG + GD++LF+HADT+V P FD LR +L + F FG+NR + G+A ME N R+ + LP+GDQA T + +GG PD+ +MEDFE+V++LR+ AG GRI +D LC+ RRW++ G + N V + Y F+PA+I+ YY Sbjct: 131 SKGGRGATLIAGVAASKGDIILFLHADTVVLPGFDGLLRSELAKDSVLATAFSFGVNRDSVVAPIA-GLAWMEWTVNIRSSILELPFGDQAIAMTRQRLDAVGGVPDVPIMEDFELVQKLRRIGAAGSGRIKTLDAKVLCSGRRWQE--KGVWRTNLLNQVIMTAYVYFGFTPAQIYSWYY 308
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Match: A0A8J6XHT9_9CYAN (TIGR04283 family arsenosugar biosynthesis glycosyltransferase n=2 Tax=Iningainema TaxID=1932705 RepID=A0A8J6XHT9_9CYAN) HSP 1 Score: 128 bits (322), Expect = 4.490e-33 Identity = 73/177 (41.24%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 23 GRGPALNAGARIATGDLLLFVHADTIVPPAFDETLRKAFQDPEILMSTFLFGINRALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKFAEMGGFPDIVMMEDFEVVRRLRKEELAGGGRIHVMDQAALCAPRRWEKPGNGPFVNFCKNWVFLFLYSKLRFSPARIFRLY 553 GR +NAGAR+ATG++LLF+HADT++PP FD +RKA Q P + F IN + + + ++E N+R+R + +PYGDQA T F ++G FP+ +MEDFE++RRLR G I ++ L +PRRW+K G F N + + Y L SP RI RLY Sbjct: 62 GRAAQMNAGARVATGEILLFLHADTLLPPEFDVMVRKALQQPTTVAGAFALRINAS------QWSLRLVEWGVNWRSRFLQMPYGDQAIFVTNKIFHQIGTFPNFPIMEDFEIIRRLRCI-----GCITIIKVPVLTSPRRWQK--KGVFKTTLINQIIIIAYL-LGISPERIIRLY 224 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig493.12891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig493.12891.1 >prot_L-elsbetiae_contig493.12891.1 ID=prot_L-elsbetiae_contig493.12891.1|Name=mRNA_L-elsbetiae_contig493.12891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp MSTFLFGINRALLRGKEPFGMAVMERVTNYRTRSIHLPYGDQAFCFTAHKback to top mRNA from alignment at L-elsbetiae_contig493:33685..37169- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig493.12891.1 ID=mRNA_L-elsbetiae_contig493.12891.1|Name=mRNA_L-elsbetiae_contig493.12891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3485bp|location=Sequence derived from alignment at L-elsbetiae_contig493:33685..37169- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig493:33685..37169- >mRNA_L-elsbetiae_contig493.12891.1 ID=mRNA_L-elsbetiae_contig493.12891.1|Name=mRNA_L-elsbetiae_contig493.12891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig493:33685..37169- (Laminarionema elsbetiae ELsaHSoW15)back to top |