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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1548 |
| Cds size | 837 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816486.4097946-UTR-L-elsbetiae_contig4906:4726..4853 | 1622816486.4097946-UTR-L-elsbetiae_contig4906:4726..4853 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig4906 4727..4853 + |
| 1691683594.56532-UTR-L-elsbetiae_contig4906:4726..4853 | 1691683594.56532-UTR-L-elsbetiae_contig4906:4726..4853 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig4906 4727..4853 + |
| 1622816486.4431689-UTR-L-elsbetiae_contig4906:5933..6517 | 1622816486.4431689-UTR-L-elsbetiae_contig4906:5933..6517 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig4906 5934..6517 + |
| 1691683594.601069-UTR-L-elsbetiae_contig4906:5933..6517 | 1691683594.601069-UTR-L-elsbetiae_contig4906:5933..6517 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig4906 5934..6517 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816486.421533-CDS-L-elsbetiae_contig4906:4853..5147 | 1622816486.421533-CDS-L-elsbetiae_contig4906:4853..5147 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4906 4854..5147 + |
| 1691683594.575409-CDS-L-elsbetiae_contig4906:4853..5147 | 1691683594.575409-CDS-L-elsbetiae_contig4906:4853..5147 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4906 4854..5147 + |
| 1622816486.432596-CDS-L-elsbetiae_contig4906:5390..5933 | 1622816486.432596-CDS-L-elsbetiae_contig4906:5390..5933 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4906 5391..5933 + |
| 1691683594.585249-CDS-L-elsbetiae_contig4906:5390..5933 | 1691683594.585249-CDS-L-elsbetiae_contig4906:5390..5933 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig4906 5391..5933 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4906.12838.1 >prot_L-elsbetiae_contig4906.12838.1 ID=prot_L-elsbetiae_contig4906.12838.1|Name=mRNA_L-elsbetiae_contig4906.12838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=279bp
MMRRSSSEPHAATHGHQRRAGDIPRSPLTIYSCGYVILRRHYSCSTSNGD
PSPLAAASLASPAPGASPTKTPSDDLPAPNTTSGTFNSSIAGVPEHISDM
DCSLHVSTVCTDDTTDISRPFWISPPSFLEVKPKNKHLPPNNVHDTNVFP
NSSQVGEHGGGNSSTTSSTIYNPPPTALPLFPSPQMEKIVAPPSSIPRPG
DTTNTMLIACFSPPAPPASPAKTEEKEQAVESVTPTKVLGIGSGTCMMCL
EECEGVILVCLAAPPAVYRSRGAGGGRR* back to topmRNA from alignment at L-elsbetiae_contig4906:4727..6517+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig4906.12838.1 ID=mRNA_L-elsbetiae_contig4906.12838.1|Name=mRNA_L-elsbetiae_contig4906.12838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1791bp|location=Sequence derived from alignment at L-elsbetiae_contig4906:4727..6517+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTTTTCTTGCAGCATGCCCCTCGATCGCCACATAACGCTACACCCCAC
CGCTATCGACAACCACTCCACGCTACACAGCACCACCAGCCGCCGTGCAC
CGGTGCGGCGTAACTGGCACCGTTTTGATGATGAGGCGATCTTCCAGCGA
GCCGCATGCCGCCACCCATGGTCACCAGCGACGAGCGGGCGACATACCTC
GCTCACCTCTCACAATATATTCTTGTGGTTATGTCATACTCCGGCGACAC
TATAGCTGCTCTACCTCGAACGGTGATCCATCGCCGTTGGCCGCAGCATC
ATTGGCATCACCAGCACCTGGAGCATCGCCGACCAAGACGCCATCCGATG
ACCTCCCCGCACCTAATACCACCTCTGGCACCTTCAACAGTTCTATCGCT
GGTGTGCCTGAGCATATTTCGGTAAGCGCTTTGGTTATCGTCGGGGAGTG
GGAGAAGGTGAAATTCCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAAAGAGATGTCCCGCTGTATCTGCTTGGCGCTGGG
TAGACAGCTGTGTTGTATGGCGCCCTTCGTAACGGACCTTCACGAACATA
CGCCCCAACCACCACGTGCGCGTGGTCATCCCCTGCCGCCAACAAATAAT
GGCGGTTGGCAAAGGACATGGACTGCAGTCTACATGTGTCAACGGTCTGC
ACGGACGACACAACGGATATTTCTCGACCTTTTTGGATATCACCCCCTTC
CTTCCTAGAGGTAAAGCCGAAAAACAAGCACTTGCCCCCCAATAATGTGC
ATGATACAAACGTGTTCCCCAACAGCTCGCAAGTCGGAGAGCACGGAGGT
GGCAACAGCAGCACAACGAGCAGCACCATTTATAACCCCCCACCGACCGC
TCTGCCCCTTTTTCCCTCGCCGCAGATGGAGAAAATTGTGGCGCCACCCT
CATCAATACCTAGGCCTGGTGACACCACCAACACTATGCTTATCGCCTGC
TTTTCTCCACCAGCACCACCAGCATCCCCAGCAAAGACAGAAGAGAAAGA
ACAAGCCGTAGAATCTGTAACCCCGACTAAAGTTTTGGGGATTGGATCTG
GAACGTGCATGATGTGTCTTGAGGAGTGTGAAGGCGTAATTTTGGTCTGC
CTGGCTGCACCTCCGGCCGTCTACCGCAGCAGAGGAGCAGGTGGAGGAAG
GAGATGATGTGAACTCGCAGAAGGTTGACGAATGCGGAGTCTCGGCCTGC
GCCGCGTGTCTAGATACCTACTTTACGGTGAGCTGCGAAGTTTGTGCAAC
ATATCTACTAGATAGACTAGTTGCCTTCCCTGTCCGAAGCGCCCAGCTTC
AGGAGTCGTTCCGCGTTCCGCGCCGAACTCGAGCTGTTCGCGTCAGGGAA
CCAAGTAGACGCTTCCCCTTACTACACGGCCTTCGAGGGAGTCTTCAGAG
ACCTCGAGGTTCCGTAGATGGATCAGGAATCCCGGAACAGCCTAATGCTC
GTGCTCATGAGCAGCATCGAGGGTGAGGCGGTCTTTTGCAGTGCTGAATT
ATTTTTCAGACCAGGAGTTGAAATCGAACGTGCGAGCTGTGCCCTGCCCC
CCCATATCTGATTTATTTCCGAACCGAGGTCAAGACCAGCGTAGCGGTCG
ACATCCCTCAGAGGAGAAAAACATGTTGAAAATATGACCTACCCGCACGC
CCAATCTCTCACTTTGGTTTTTTGTCCACTTTGCTCTACTCGGCGCCAGC
ATTTCGGCCCTTGCCCCCCCCCCCTGCCCCCTTGCCACCGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig4906:4727..6517+ >mRNA_L-elsbetiae_contig4906.12838.1 ID=mRNA_L-elsbetiae_contig4906.12838.1|Name=mRNA_L-elsbetiae_contig4906.12838.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1674bp|location=Sequence derived from alignment at L-elsbetiae_contig4906:4727..6517+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGAGGCGATCTTCCAGCGAGCCGCATGCCGCCACCCATGGTCACCA
GCGACGAGCGGGCGACATACCTCGCTCACCTCTCACAATATATTCTTGTG
GTTATGTCATACTCCGGCGACACTATAGCTGCTCTACCTCGAACGGTGAT
CCATCGCCGTTGGCCGCAGCATCATTGGCATCACCAGCACCTGGAGCATC
GCCGACCAAGACGCCATCCGATGACCTCCCCGCACCTAATACCACCTCTG
GCACCTTCAACAGTTCTATCGCTGGTGTGCCTGAGCATATTTCGATGATG
AGGCGATCTTCCAGCGAGCCGCATGCCGCCACCCATGGTCACCAGCGACG
AGCGGGCGACATACCTCGCTCACCTCTCACAATATATTCTTGTGGTTATG
TCATACTCCGGCGACACTATAGCTGCTCTACCTCGAACGGTGATCCATCG
CCGTTGGCCGCAGCATCATTGGCATCACCAGCACCTGGAGCATCGCCGAC
CAAGACGCCATCCGATGACCTCCCCGCACCTAATACCACCTCTGGCACCT
TCAACAGTTCTATCGCTGGTGTGCCTGAGCATATTTCGGACATGGACTGC
AGTCTACATGTGTCAACGGTCTGCACGGACGACACAACGGATATTTCTCG
ACCTTTTTGGATATCACCCCCTTCCTTCCTAGAGGTAAAGCCGAAAAACA
AGCACTTGCCCCCCAATAATGTGCATGATACAAACGTGTTCCCCAACAGC
TCGCAAGTCGGAGAGCACGGAGGTGGCAACAGCAGCACAACGAGCAGCAC
CATTTATAACCCCCCACCGACCGCTCTGCCCCTTTTTCCCTCGCCGCAGA
TGGAGAAAATTGTGGCGCCACCCTCATCAATACCTAGGCCTGGTGACACC
ACCAACACTATGCTTATCGCCTGCTTTTCTCCACCAGCACCACCAGCATC
CCCAGCAAAGACAGAAGAGAAAGAACAAGCCGTAGAATCTGTAACCCCGA
CTAAAGTTTTGGGGATTGGATCTGGAACGTGCATGATGTGTCTTGAGGAG
TGTGAAGGCGTAATTTTGGTCTGCCTGGCTGCACCTCCGGCCGTCTACCG
CAGCAGAGGAGCAGGTGGAGGAAGGAGATGAGACATGGACTGCAGTCTAC
ATGTGTCAACGGTCTGCACGGACGACACAACGGATATTTCTCGACCTTTT
TGGATATCACCCCCTTCCTTCCTAGAGGTAAAGCCGAAAAACAAGCACTT
GCCCCCCAATAATGTGCATGATACAAACGTGTTCCCCAACAGCTCGCAAG
TCGGAGAGCACGGAGGTGGCAACAGCAGCACAACGAGCAGCACCATTTAT
AACCCCCCACCGACCGCTCTGCCCCTTTTTCCCTCGCCGCAGATGGAGAA
AATTGTGGCGCCACCCTCATCAATACCTAGGCCTGGTGACACCACCAACA
CTATGCTTATCGCCTGCTTTTCTCCACCAGCACCACCAGCATCCCCAGCA
AAGACAGAAGAGAAAGAACAAGCCGTAGAATCTGTAACCCCGACTAAAGT
TTTGGGGATTGGATCTGGAACGTGCATGATGTGTCTTGAGGAGTGTGAAG
GCGTAATTTTGGTCTGCCTGGCTGCACCTCCGGCCGTCTACCGCAGCAGA
GGAGCAGGTGGAGGAAGGAGATGA back to top
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