mRNA_L-elsbetiae_contig4864.12778.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig4864.12778.1
Unique NamemRNA_L-elsbetiae_contig4864.12778.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 2.270e-89
Identity = 137/207 (66.18%), Postives = 164/207 (79.23%), Query Frame = 1
Query:   52 MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672
            MAP+K +YF+  A+GEP+RLALAQSG EW+DNRV    WP LKPTLPY Q+PV+EVDG VIPQS A LRYVGK G LYPTDP+QAAFAD+A DAV DI   MR  I+ E DA+KK  +RK+L ET +P WL  LEK L+ AGG+YFA  KLSIGDIAVVARLNWL +G+ +G+P+T++D  PL+ SLV RVMAEP+IVAY+  RPKK
Sbjct:    1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMR-GIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.260e-83
Identity = 135/208 (64.90%), Postives = 161/208 (77.40%), Query Frame = 1
Query:   52 MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLD-GIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672
            MAP+K +YFDI A+GE +RLALAQSG EW+DNRV   +WP LKPTLPY Q+PV+EVDG VIPQ+ A LRYVGK G LYPTDP+QAAFAD+A DAV D+H  MRA I  E DA+ K  + K+L E  +P WL  LEK L+ AGG+YFA  KLSIGDIAVVARLNWL +G+ D  +P+ I++  PLL SLV RVMAEP+IVAY+  RPKK
Sbjct:    1 MAPMKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRA-IFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPKK 207          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 1.260e-74
Identity = 121/199 (60.80%), Postives = 150/199 (75.38%), Query Frame = 1
Query:   70 SYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARP 666
            SYFDI A+GEP+RLALA SG  W D RV+  ++ A+KP+LPY QLP +EV G +IPQS AQ+RY+GK GGLY  DP++AAFADAA++AVID+H  +R + V E D  KK+ MRK + +  +P WL  LE+ L+ AGG YFA GKLSIGDI VVARLNWL+ G+LDGIP TIVD  PLL +LV  VM+E KIV YL + P
Sbjct:    8 SYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPT-VHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 5.050e-67
Identity = 117/203 (57.64%), Postives = 144/203 (70.94%), Query Frame = 1
Query:   52 MAP---IKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAY 651
            MAP   +  +YFD     EPVR+ALA +G  W D RV+ +++PALKP LP GQLP++EV G V+PQS AQLRYVGK  GLYP D ++AA ADAAVD+V D H+ + A  V + D  ++M MR+ L    +P WL  LEK L  AGG YFA GKLSIGDIAVVARL WL+ GSLDGIP +IVD +PLL +L++RV AEP I  Y
Sbjct:    1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKL-APTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKY 202          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 3.480e-60
Identity = 102/157 (64.97%), Postives = 124/157 (78.98%), Query Frame = 1
Query:  202 LPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672
            +PV+EVDG VIPQS A LRYVGK G LYP DP+QAAFAD+AVDAV DIH  MR  I+ E DA+ K  +RK+L ET +P WLT  EK L+ AGG+YFA  KLSIGDIAVVARLNWL +G+ +G+P+T+++  PLL SLV R+MAEP+IVAY+  RPKK
Sbjct:    1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMR-GIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPKK 156          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.190e-52
Identity = 98/207 (47.34%), Postives = 133/207 (64.25%), Query Frame = 1
Query:   52 MAP-IKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPK 669
            MAP +   YFD     EP+R AL +   EW D R+   ++ ALKP+LP GQ+PV+ +DG  + QS A LRYVGK GGL P+D + AA  DA +D V D+HI +R S + E D  KKM MR +LA   IP WL+ +EK L +  G +F D K+++ DI +  RL+ +RNG LDGIP TI D +P L ++ D V++EPK+ A+LA   K
Sbjct:    1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFM-EKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFD-KMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 4.830e-52
Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 1
Query:   52 MAP-IKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDG-HPLLVSLVDRVMAEPKIVAYLAARPK 669
            MAP +  +YFDI    EP+R AL QSG EW D R+ G ++  +KP+LP GQLPV+EVDG  +PQS   LRYVGK GGL+P+D ++AA  DA +DA +D +I +R +   E D  K++ M  +LA   IP WL  +EK L    G YFA+ K+S+ DI +  RL  LR+G+ +G+P TI D  +P L +L D ++ EPKI A++A   K
Sbjct:    1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYT-EKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAE-KMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.820e-45
Identity = 89/207 (43.00%), Postives = 127/207 (61.35%), Query Frame = 1
Query:   52 MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672
            M+ I  +YFDI    E +RLA    G  + D RV+  ++  +K  LP+ QLP++ VD  V PQS+A LRY GK GGLYP+DP+ AA  DA +D + DI   +R SI  ET+A++K++MRKEL+E T+P WL  LE+ LE AG  +F   +++I D+ +  R+ WLR G L GIP TI+     + +  + V + PK+  Y    P K
Sbjct:    1 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIY-ETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGK 206          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A0A4U0GJK4_9GAMM (Glutathione S-transferase n=1 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4U0GJK4_9GAMM)

HSP 1 Score: 156 bits (395), Expect = 5.480e-42
Identity = 88/208 (42.31%), Postives = 126/208 (60.58%), Query Frame = 1
Query:   52 MAPIKFSYFDIEA-MGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDG-HPLLVSLVDRVMAEPKIVAYLAARPK 669
            M  +  +YFD +   GEP RLAL   G  + D RV   +W A++  +P+  LPV+EVDG ++ QS++  RYVGK  GLYP D +QA   D  +DAV D+   + ++I    DAE K   R+ L    +P +L + +  LE AGG+YFAD +L++GD+ V   + WLR+G LD IP  +VD   P LV+  +R+ A+P+I AY A R K
Sbjct:    1 MPALTLTYFDFDGGRGEPARLALHIGGVPFEDRRVLFKEWQAMRDGMPFRALPVLEVDGRLVAQSNSINRYVGKLAGLYPQDNLQALLCDEVMDAVEDMDFQIGSTI--GLDAEAKKKAREALTAGPLPHYLEQFQARLEAAGGEYFADRRLTVGDLKVWMLVRWLRSGMLDDIPKDLVDRVAPRLVTHAERLAAQPQIAAYYAGRKK 206          
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A6GA09_9DELT (Glutathione S-transferase-like protein n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6GA09_9DELT)

HSP 1 Score: 152 bits (383), Expect = 2.890e-40
Identity = 84/206 (40.78%), Postives = 125/206 (60.68%), Query Frame = 1
Query:   52 MAPIKFSYFDIEA-MGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDG-HPLLVSLVDRVMAEPKIVAYLAAR 663
            M  ++ +YFD     GE  R+AL      + D RVA ADWPA KP  P+G +P++ VDG V  QS A LRYVGK  GLYP D +QAA+ D  +DA+ +I    + +I   +DA++K  +R+ LA   + D+L  +   LE+ GG++FADG+L++ D+ +   +++LR G LD +   + D   P+LV+  +RV A P + AY A R
Sbjct:    1 MPELELTYFDFPGGRGEAPRMALFIGEVPYTDTRVAFADWPAFKPKTPFGAMPLLAVDGQVFAQSCAVLRYVGKVAGLYPEDALQAAYCDETLDAIEEIG--QKIAIATSSDADEKQRLREALAAGPLSDFLRNMGARLESRGGEWFADGRLTVADLRLSIWMSYLRAGKLDHVSPELADAVAPVLVAHHERVKAHPGVQAYHAQR 204          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHF0_ECTSI2.270e-8966.18Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D8LK37_ECTSI1.260e-8364.90Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
B1N8E6_9PHAE1.260e-7460.80Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
B1N8E7_9PHAE5.050e-6757.64Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
A0A6H5JAZ7_9PHAE3.480e-6064.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRV2_9PHAE1.190e-5247.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B1N8E8_9PHAE4.830e-5247.12Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
D7FPV3_ECTSI1.820e-4543.00Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
A0A4U0GJK4_9GAMM5.480e-4242.31Glutathione S-transferase n=1 Tax=Sinimarinibacter... [more]
A6GA09_9DELT2.890e-4040.78Glutathione S-transferase-like protein n=1 Tax=Ple... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4864contigL-elsbetiae_contig4864:9692..13438 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score156.0
Seed ortholog evalue1.9e-35
Seed eggNOG ortholog391625.PPSIR1_26493
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.glutathione S-transferase
EggNOG OGs1PD8F@1224,2WZSI@28221,2Z2NR@29,435EY@68525,COG0625@1,COG0625@2
EC2.5.1.18,5.3.99.2
COG Functional cat.H
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000
Ec32 ortholog descriptionGlutathione S-transferase
Ec32 orthologEc-13_000340.1
Exons6
Model size1282
Cds size624
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4864.12778.1prot_L-elsbetiae_contig4864.12778.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig4864 9743..12831 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816479.2156727-UTR-L-elsbetiae_contig4864:9691..97421622816479.2156727-UTR-L-elsbetiae_contig4864:9691..9742Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4864 9692..9742 +
1691683589.503549-UTR-L-elsbetiae_contig4864:9691..97421691683589.503549-UTR-L-elsbetiae_contig4864:9691..9742Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4864 9692..9742 +
1622816479.3074682-UTR-L-elsbetiae_contig4864:12831..134381622816479.3074682-UTR-L-elsbetiae_contig4864:12831..13438Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4864 12832..13438 +
1691683589.5687761-UTR-L-elsbetiae_contig4864:12831..134381691683589.5687761-UTR-L-elsbetiae_contig4864:12831..13438Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig4864 12832..13438 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816479.230779-CDS-L-elsbetiae_contig4864:9742..97751622816479.230779-CDS-L-elsbetiae_contig4864:9742..9775Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 9743..9775 +
1691683589.5157669-CDS-L-elsbetiae_contig4864:9742..97751691683589.5157669-CDS-L-elsbetiae_contig4864:9742..9775Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 9743..9775 +
1622816479.2442377-CDS-L-elsbetiae_contig4864:9957..100571622816479.2442377-CDS-L-elsbetiae_contig4864:9957..10057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 9958..10057 +
1691683589.524416-CDS-L-elsbetiae_contig4864:9957..100571691683589.524416-CDS-L-elsbetiae_contig4864:9957..10057Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 9958..10057 +
1622816479.2566347-CDS-L-elsbetiae_contig4864:11085..112971622816479.2566347-CDS-L-elsbetiae_contig4864:11085..11297Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 11086..11297 +
1691683589.5333142-CDS-L-elsbetiae_contig4864:11085..112971691683589.5333142-CDS-L-elsbetiae_contig4864:11085..11297Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 11086..11297 +
1622816479.2666476-CDS-L-elsbetiae_contig4864:11713..117541622816479.2666476-CDS-L-elsbetiae_contig4864:11713..11754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 11714..11754 +
1691683589.543126-CDS-L-elsbetiae_contig4864:11713..117541691683589.543126-CDS-L-elsbetiae_contig4864:11713..11754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 11714..11754 +
1622816479.276489-CDS-L-elsbetiae_contig4864:12026..120901622816479.276489-CDS-L-elsbetiae_contig4864:12026..12090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 12027..12090 +
1691683589.5528507-CDS-L-elsbetiae_contig4864:12026..120901691683589.5528507-CDS-L-elsbetiae_contig4864:12026..12090Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 12027..12090 +
1622816479.2884405-CDS-L-elsbetiae_contig4864:12657..128311622816479.2884405-CDS-L-elsbetiae_contig4864:12657..12831Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 12658..12831 +
1691683589.5606444-CDS-L-elsbetiae_contig4864:12657..128311691683589.5606444-CDS-L-elsbetiae_contig4864:12657..12831Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig4864 12658..12831 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig4864.12778.1

>prot_L-elsbetiae_contig4864.12778.1 ID=prot_L-elsbetiae_contig4864.12778.1|Name=mRNA_L-elsbetiae_contig4864.12778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=208bp
MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQ
LPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHI
PMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGK
LSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAY
LAARPKK*
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mRNA from alignment at L-elsbetiae_contig4864:9692..13438+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig4864.12778.1 ID=mRNA_L-elsbetiae_contig4864.12778.1|Name=mRNA_L-elsbetiae_contig4864.12778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3747bp|location=Sequence derived from alignment at L-elsbetiae_contig4864:9692..13438+ (Laminarionema elsbetiae ELsaHSoW15)
TCTACACATCGCAAACATCTAACGATCCACTTCTCACGACTACATCGCAT CATGGCACCCATCAAGTTCTCCTACTTCGATATCGTGAGTGTGTGTGGTC ACAACGCAGTGTGCTTGCTCGTCACGGCCGCGTAGCATTGCGCGGTCGCG GCGGATATATGCCTGCGGCTCCGCGACACTCTGCCTGCTTGCAGCCCTTC CCTCAAGACACGTGTTGTCCTTTCCCCCGTCGTTATTTGCCCTCTGCCGG ACCTCATTCCTTGCAGGAAGCCATGGGCGAGCCTGTCCGGCTGGCTTTGG CGCAGAGTGGGGCGGAGTGGGTCGATAACAGAGTAGCCGGCGCGGATTGG CCTGCGCTCAAACCAAGTGAGCTGGAATGCCAGAGAACAAATGCAAACTT CTTCTTCGAGATCCACGTCTTAGAAATCTGCACAAACTTGCGAACTGCTG TGGATCCTTCACTCACTGCCGTGGATCCTTCACTCACTGCCGTGGATCCT TCATCCATACATCTTCTCGCCACGATCCGCTGCAAAGTTGGACAACTTGA CTCGATGACTTGATTATTTTTCGATTCCCATCCATAAAAACGATACGCAA GATATCGTACCCAGCATAGTCTAAGCAGTATTTGGTGACACGCACACGTT GATATCTAACAGTTAGTCGGGTGCATGTGTCTTGTGCTTGTTGTCTATAG TATCTGTAGGTGGCACCCAACACCCGCCGTGGTGGCAGCCATGATGAAGA GTGCATGTATCCTTAGTGGGAATCGTTCTACACCATGCGAATCCTGTCAG AGCTTGGGAGACGGAAAGACCGCACCCTACCTACGTTAATGGAAAAAAAC GATCGCAAATCTGCACACTTTCGCATCCTCAAGGTGGCACTCGCTGCACG GTCTACTTACTTTTTCCGAGACAAGTTCGCCCGGCCGCCGGCTCTTGTTG TGTTGTGTGTGATGCGCCATTTCGTACCTAGATATATTGTGTGATACTGC ACGGTCCGCCTCTGTTTTGGCCGCAAAGTGTTTTCTCGTGACATGTTGCG GCTTGACGAAGTCGTTAGTCGTTGCAGAGTGTGCCGTGAGCCCGCGCACC AATGCTCTCGAAATTTGAGAGCACATTTGCATCCTATTTAGTCGAGAGGA ATTATTCACCCACACAAGAACGACTCTTGACTACCTCAAAGGTCATTCTA ATGTACTGGTATAATTTATCGTAGGATTGAGATCGACCACATCGTCCGCA TGTGTGGCTATTCTTCAAAGAAATGGGAGGCAACTCCAAACTCGTGTTTG TATGATGCTTATTTCGCCACTCAACAAACGAAACTCCGTCGTGCCCGCCG GGTACCCGTTGCCCTCTCGCCGACCTCCGCCGACCGTGCTGCAGCGTTGC CCTACGGGCAGCTGCCAGTCATGGAGGTCGACGGAGTGGTGATCCCCCAG AGCTCGGCTCAGCTCCGCTACGTCGGGAAAACCGGAGGGCTGTACCCCAC GGACCCCGTTCAAGCAGCGTTCGCGGATGCGGCCGTCGACGCTGTGATCG ACATCCACATCCCCATGCGCGCCTCAATCGTGGGAGAGACCGACGCCGAG AAGAAGGTACGGGCGGTGCACGAGTAGTCGTACCGAACCATACTGGTTAT ATATATGTACCTTGTACGAGTCTACCGTCATCGCATGCGTTGTACGAGTC TACCGTCATCGAATGCGTAAAAGCTGTTCGAAGTATGGAGGCTGCTAGTC TCTTGAGAGAGAGATCGATTTGTGTTGGTTGGTGTGTTTTCATCATTGCT GGGGCACCGTCCCCACGTATATACCGTGGTAGTGTTGGCGGCCCCGTGGT GAAGGCTGCGTTTGTCTCGCTGCGGCACTGGCTCGCTGTTTCAGCTCACA TCGGCCCACGGATGTAGAGCATCCCGATCGATCAATCAATCAGCAACCTA ACAGCGTTGATTCGACTTTTTCTCTTCGTCGCCTCTCTCGGGCCTTCTTT TGTTCTTTCGTGCGAACTCCAGATGGCAATGCGCAAGGAGTTGGCGGAAA CCACCATCCCAGAGTGAGTGCCATGCAGTAGAGAGTGCAGCAGCGCCGCC CTCGTAGAGTTTTTGGGTTGGAACTGTAACCATCGGCAGATCCAGAATCA CGCGCACCAACTGGTTGGTCTCCTGGAGCACCGTTACGAGAGAGCTTGTG TGACTGAGCTGCGCATATTGCGTGAATGATGGAAATAACAATTGCCTTGC CGGCTATTGCGATGTATCGTACATTCCTTTCTGAAAAACCCGTTTCCGTA CCGGCACCCTGCGAATTGTTTTGATCCCTGTGCAGCTGGCTGACCAAGTT GGAGAAGGTCCTGGAGACTGCGGGTGGCCAGTACTTCGCCGACGGCAAGG TTAGTCTCAACCCCCACTCCTGCCCACACTCGTGTCGTTCCTCTTGCTCG CTGATGCTCAGGATGGACGCTCGCACGTTTCGTCAGCGCGCCCTTCACAA GTAGCCTCTCTCCTGTCTCAGCCATACAATACCGCAAAAGTTAAAATCTC TCTGGTATAATTAGTCTCTTGGTACAATAGAGCAATGTCGCGACGAACGG GTTGGCATCACAAGCACAAAAACGGTTTCGGTGCAGGGCCGGCCCTCCAG TTTGGCTCTTTGTTTTTTTCTAGATGTATGTATCCGACATGTTGTGCACG GGCCTGATGGATGTTTTTTGTTCGACTTCCGCGCCATCTATGTTGTGGGT GCACCAGCTTTTAGTCCTGGGTGGCTGTTACAACCGGTCGGGATACCCGG GTGCGCTGCGACTCGGAAGGCCCCATCAATATCCGAACAAAATCTCTAGT GTGGGTACGAAGGCCCCATCTAAGATTCATTGATTATTTTTCAAAAAATC GATTTTCTCCTGCTTTGTTGCACCTGTTTTTAACTCTTTTTGTGCGTTTC GGTTTCTTTTTCGCAGCTCTCCATCGGAGACATTGCGGTGGTCGCCCGTC TCAACTGGCTCCGCAACGGTTCCCTCGACGGTATCCCGGCGACGATAGTG GACGGGCACCCTCTCCTGGTGTCCCTGGTCGACAGGGTGATGGCCGAGCC GAAGATTGTGGCGTACCTGGCGGCGCGGCCGAAGAAATAGATTCGAGGCT ATTGTACCGAGTGCGTTTCCACGGCAGCAGTAGTCAGAGCACGTGCACAC AAGAGTTTGTATTTTACTGCTATATGTACTGACAAGACGGGCAGGTTTTT TCGTTTGAGCGGGTTGTGGCTGATGGCAGACAGCAATGTCGGTATTCGTA CCTAGAGTCTTGTTGCTTGTTTGCTAGAAGAGGATTGCCGCAGAAAGTCG AGAGGCGGATATTGATGCGGGTGTTGTCTCGGGAGCCCTCGCCTACCCGC TTCGTCTAGGCTTGTTTTATTGGTGGTTTGGTGTTGTAGACAACACGGAT GACAGGACCTCTGGCAAGATGTCCCTCCAGCGCTGGTTAAATTGAATGTG ATGTGATGGTGAAAACAATTACGAGTAAAAAAAAGCCGACAACCGCGTAC ATACAACACGTATGTAGACGGTGTACGTTGGTGTTAACAGATACGATGAG CCCTACTCTTCTCGCCCAGGGTAAAAGCACTTGCTGTAGGTATTTCCCAG AGAGCGACCGTCCAAGTAAGTGCTGTCCCAATATTCCAATTTTCAATTTG TTGGTTCTTTCAGGCCTTTCGTTTGAGCAATATATTTTCTTGTGACC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig4864:9692..13438+

>mRNA_L-elsbetiae_contig4864.12778.1 ID=mRNA_L-elsbetiae_contig4864.12778.1|Name=mRNA_L-elsbetiae_contig4864.12778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1248bp|location=Sequence derived from alignment at L-elsbetiae_contig4864:9692..13438+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCACCCATCAAGTTCTCCTACTTCGATATCATGGCACCCATCAAGTT
CTCCTACTTCGATATCGAAGCCATGGGCGAGCCTGTCCGGCTGGCTTTGG
CGCAGAGTGGGGCGGAGTGGGTCGATAACAGAGTAGCCGGCGCGGATTGG
CCTGCGCTCAAACCAAGAAGCCATGGGCGAGCCTGTCCGGCTGGCTTTGG
CGCAGAGTGGGGCGGAGTGGGTCGATAACAGAGTAGCCGGCGCGGATTGG
CCTGCGCTCAAACCAACGTTGCCCTACGGGCAGCTGCCAGTCATGGAGGT
CGACGGAGTGGTGATCCCCCAGAGCTCGGCTCAGCTCCGCTACGTCGGGA
AAACCGGAGGGCTGTACCCCACGGACCCCGTTCAAGCAGCGTTCGCGGAT
GCGGCCGTCGACGCTGTGATCGACATCCACATCCCCATGCGCGCCTCAAT
CGTGGGAGAGACCGACGCCGAGAAGAAGCGTTGCCCTACGGGCAGCTGCC
AGTCATGGAGGTCGACGGAGTGGTGATCCCCCAGAGCTCGGCTCAGCTCC
GCTACGTCGGGAAAACCGGAGGGCTGTACCCCACGGACCCCGTTCAAGCA
GCGTTCGCGGATGCGGCCGTCGACGCTGTGATCGACATCCACATCCCCAT
GCGCGCCTCAATCGTGGGAGAGACCGACGCCGAGAAGAAGATGGCAATGC
GCAAGGAGTTGGCGGAAACCACCATCCCAGAATGGCAATGCGCAAGGAGT
TGGCGGAAACCACCATCCCAGACTGGCTGACCAAGTTGGAGAAGGTCCTG
GAGACTGCGGGTGGCCAGTACTTCGCCGACGGCAAGCTGGCTGACCAAGT
TGGAGAAGGTCCTGGAGACTGCGGGTGGCCAGTACTTCGCCGACGGCAAG
CTCTCCATCGGAGACATTGCGGTGGTCGCCCGTCTCAACTGGCTCCGCAA
CGGTTCCCTCGACGGTATCCCGGCGACGATAGTGGACGGGCACCCTCTCC
TGGTGTCCCTGGTCGACAGGGTGATGGCCGAGCCGAAGATTGTGGCGTAC
CTGGCGGCGCGGCCGAAGAAATAGCTCTCCATCGGAGACATTGCGGTGGT
CGCCCGTCTCAACTGGCTCCGCAACGGTTCCCTCGACGGTATCCCGGCGA
CGATAGTGGACGGGCACCCTCTCCTGGTGTCCCTGGTCGACAGGGTGATG
GCCGAGCCGAAGATTGTGGCGTACCTGGCGGCGCGGCCGAAGAAATAG
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