mRNA_L-elsbetiae_contig4864.12778.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 278 bits (712), Expect = 2.270e-89 Identity = 137/207 (66.18%), Postives = 164/207 (79.23%), Query Frame = 1 Query: 52 MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672 MAP+K +YF+ A+GEP+RLALAQSG EW+DNRV WP LKPTLPY Q+PV+EVDG VIPQS A LRYVGK G LYPTDP+QAAFAD+A DAV DI MR I+ E DA+KK +RK+L ET +P WL LEK L+ AGG+YFA KLSIGDIAVVARLNWL +G+ +G+P+T++D PL+ SLV RVMAEP+IVAY+ RPKK Sbjct: 1 MAPMKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMR-GIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPKK 206
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 264 bits (674), Expect = 1.260e-83 Identity = 135/208 (64.90%), Postives = 161/208 (77.40%), Query Frame = 1 Query: 52 MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLD-GIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672 MAP+K +YFDI A+GE +RLALAQSG EW+DNRV +WP LKPTLPY Q+PV+EVDG VIPQ+ A LRYVGK G LYPTDP+QAAFAD+A DAV D+H MRA I E DA+ K + K+L E +P WL LEK L+ AGG+YFA KLSIGDIAVVARLNWL +G+ D +P+ I++ PLL SLV RVMAEP+IVAY+ RPKK Sbjct: 1 MAPMKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRA-IFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPKK 207
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 241 bits (614), Expect = 1.260e-74 Identity = 121/199 (60.80%), Postives = 150/199 (75.38%), Query Frame = 1 Query: 70 SYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARP 666 SYFDI A+GEP+RLALA SG W D RV+ ++ A+KP+LPY QLP +EV G +IPQS AQ+RY+GK GGLY DP++AAFADAA++AVID+H +R + V E D KK+ MRK + + +P WL LE+ L+ AGG YFA GKLSIGDI VVARLNWL+ G+LDGIP TIVD PLL +LV VM+E KIV YL + P Sbjct: 8 SYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPT-VHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYLESGP 205
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 221 bits (564), Expect = 5.050e-67 Identity = 117/203 (57.64%), Postives = 144/203 (70.94%), Query Frame = 1 Query: 52 MAP---IKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAY 651 MAP + +YFD EPVR+ALA +G W D RV+ +++PALKP LP GQLP++EV G V+PQS AQLRYVGK GLYP D ++AA ADAAVD+V D H+ + A V + D ++M MR+ L +P WL LEK L AGG YFA GKLSIGDIAVVARL WL+ GSLDGIP +IVD +PLL +L++RV AEP I Y Sbjct: 1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKL-APTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKY 202
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 202 bits (513), Expect = 3.480e-60 Identity = 102/157 (64.97%), Postives = 124/157 (78.98%), Query Frame = 1 Query: 202 LPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672 +PV+EVDG VIPQS A LRYVGK G LYP DP+QAAFAD+AVDAV DIH MR I+ E DA+ K +RK+L ET +P WLT EK L+ AGG+YFA KLSIGDIAVVARLNWL +G+ +G+P+T+++ PLL SLV R+MAEP+IVAY+ RPKK Sbjct: 1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMR-GIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLEEFPLLSSLVQRIMAEPRIVAYMEGRPKK 156
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 1.190e-52 Identity = 98/207 (47.34%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 52 MAP-IKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPK 669 MAP + YFD EP+R AL + EW D R+ ++ ALKP+LP GQ+PV+ +DG + QS A LRYVGK GGL P+D + AA DA +D V D+HI +R S + E D KKM MR +LA IP WL+ +EK L + G +F D K+++ DI + RL+ +RNG LDGIP TI D +P L ++ D V++EPK+ A+LA K Sbjct: 1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFM-EKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFD-KMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE) HSP 1 Score: 182 bits (463), Expect = 4.830e-52 Identity = 98/208 (47.12%), Postives = 135/208 (64.90%), Query Frame = 1 Query: 52 MAP-IKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDG-HPLLVSLVDRVMAEPKIVAYLAARPK 669 MAP + +YFDI EP+R AL QSG EW D R+ G ++ +KP+LP GQLPV+EVDG +PQS LRYVGK GGL+P+D ++AA DA +DA +D +I +R + E D K++ M +LA IP WL +EK L G YFA+ K+S+ DI + RL LR+G+ +G+P TI D +P L +L D ++ EPKI A++A K Sbjct: 1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYT-EKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAE-KMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.820e-45 Identity = 89/207 (43.00%), Postives = 127/207 (61.35%), Query Frame = 1 Query: 52 MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDGHPLLVSLVDRVMAEPKIVAYLAARPKK 672 M+ I +YFDI E +RLA G + D RV+ ++ +K LP+ QLP++ VD V PQS+A LRY GK GGLYP+DP+ AA DA +D + DI +R SI ET+A++K++MRKEL+E T+P WL LE+ LE AG +F +++I D+ + R+ WLR G L GIP TI+ + + + V + PK+ Y P K Sbjct: 1 MSSITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRDLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIY-ETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKNGPGK 206
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A0A4U0GJK4_9GAMM (Glutathione S-transferase n=1 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4U0GJK4_9GAMM) HSP 1 Score: 156 bits (395), Expect = 5.480e-42 Identity = 88/208 (42.31%), Postives = 126/208 (60.58%), Query Frame = 1 Query: 52 MAPIKFSYFDIEA-MGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDG-HPLLVSLVDRVMAEPKIVAYLAARPK 669 M + +YFD + GEP RLAL G + D RV +W A++ +P+ LPV+EVDG ++ QS++ RYVGK GLYP D +QA D +DAV D+ + ++I DAE K R+ L +P +L + + LE AGG+YFAD +L++GD+ V + WLR+G LD IP +VD P LV+ +R+ A+P+I AY A R K Sbjct: 1 MPALTLTYFDFDGGRGEPARLALHIGGVPFEDRRVLFKEWQAMRDGMPFRALPVLEVDGRLVAQSNSINRYVGKLAGLYPQDNLQALLCDEVMDAVEDMDFQIGSTI--GLDAEAKKKAREALTAGPLPHYLEQFQARLEAAGGEYFADRRLTVGDLKVWMLVRWLRSGMLDDIPKDLVDRVAPRLVTHAERLAAQPQIAAYYAGRKK 206
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Match: A6GA09_9DELT (Glutathione S-transferase-like protein n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6GA09_9DELT) HSP 1 Score: 152 bits (383), Expect = 2.890e-40 Identity = 84/206 (40.78%), Postives = 125/206 (60.68%), Query Frame = 1 Query: 52 MAPIKFSYFDIEA-MGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQLPVMEVDGVVIPQSSAQLRYVGKTGGLYPTDPVQAAFADAAVDAVIDIHIPMRASIVGETDAEKKMAMRKELAETTIPDWLTKLEKVLETAGGQYFADGKLSIGDIAVVARLNWLRNGSLDGIPATIVDG-HPLLVSLVDRVMAEPKIVAYLAAR 663 M ++ +YFD GE R+AL + D RVA ADWPA KP P+G +P++ VDG V QS A LRYVGK GLYP D +QAA+ D +DA+ +I + +I +DA++K +R+ LA + D+L + LE+ GG++FADG+L++ D+ + +++LR G LD + + D P+LV+ +RV A P + AY A R Sbjct: 1 MPELELTYFDFPGGRGEAPRMALFIGEVPYTDTRVAFADWPAFKPKTPFGAMPLLAVDGQVFAQSCAVLRYVGKVAGLYPEDALQAAYCDETLDAIEEIG--QKIAIATSSDADEKQRLREALAAGPLSDFLRNMGARLESRGGEWFADGRLTVADLRLSIWMSYLRAGKLDHVSPELADAVAPVLVAHHERVKAHPGVQAYHAQR 204 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4864.12778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4864.12778.1 >prot_L-elsbetiae_contig4864.12778.1 ID=prot_L-elsbetiae_contig4864.12778.1|Name=mRNA_L-elsbetiae_contig4864.12778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=208bp MAPIKFSYFDIEAMGEPVRLALAQSGAEWVDNRVAGADWPALKPTLPYGQback to top mRNA from alignment at L-elsbetiae_contig4864:9692..13438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4864.12778.1 ID=mRNA_L-elsbetiae_contig4864.12778.1|Name=mRNA_L-elsbetiae_contig4864.12778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3747bp|location=Sequence derived from alignment at L-elsbetiae_contig4864:9692..13438+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4864:9692..13438+ >mRNA_L-elsbetiae_contig4864.12778.1 ID=mRNA_L-elsbetiae_contig4864.12778.1|Name=mRNA_L-elsbetiae_contig4864.12778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1248bp|location=Sequence derived from alignment at L-elsbetiae_contig4864:9692..13438+ (Laminarionema elsbetiae ELsaHSoW15)back to top |