mRNA_L-elsbetiae_contig486.12770.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig486.12770.1
Unique NamemRNA_L-elsbetiae_contig486.12770.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: D8LC96_ECTSI (Peroxisomal membrane protein PEX16 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC96_ECTSI)

HSP 1 Score: 579 bits (1492), Expect = 9.150e-200
Identity = 339/536 (63.25%), Postives = 378/536 (70.52%), Query Frame = 1 
Query:   31 MEQLQHDPRGAEDGWSYAKFVTENTTAARTLESLLQYSGFFAPARFADRDLSIESGYALSSLAALAHDRILLQGQES-LRRGGGDRGTIFFGNTDGDQ------SPDA-----PKRRDRPSSMTAVAERMRVALAMIAHVQVVVEKLAGQHGGLRRRRQAITYLETLKALSRLLLLACTREMVVGGGAYVSGGKQRSQPRQDRNKSGASRPWREVDLREVRLDHPQSSEFAAANANYPPSLSRCPPEVYTGKRSGVRLVVPPRASVIWSGRGRSNRPIGVGRAATTSSFPSSSSLCDGEGDRSSSCSQRSPGEGGFCSTCWARDSGSNPRLSFHGHGGQEIGAGSSSSGATNGERPCVVEGWRHQRQAQEGSSGTALSPREGACGRSQAWLMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAGGGR-AMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 1599
            MEQ Q DPR +E+GW YA FV  N TAART+E+LL+YSGFFAPARFADRDLSIESGYALSSLAALAHD+IL+ GQ   L RGG D G       DG Q      +P +     PK R+RPSS T VA+RMRVALAMIA+VQ+VVEKLA QHGG RRR+QAI YLETLKAL+RLLLLACTREMVVGGG+YVSGG +R+ P  +RNK+GA   WREVDL   RL+  QSSEFA    + PPS    PPEVYTGKRSGV+L+VPPRASV+WSGRGRSNR  GV R A T+S PS  S              R   +G F       DS S+       +GGQ IG G S   A+  +  CV   WR +R+AQ G                QAWLM GEVIHILRPL +SY C + GE+SWRPWL SL MDAAAFACTARAGG   AM+LL            +PVLPYLDEEQAAELRRRKMLWFLYLMRSPAFEL AEPV RGAAGVFEGVP+LGGMAGYALNMLLYVQRHHFYTSAS
Sbjct:    1 MEQQQRDPRASEEGWCYANFVRHNPTAARTVETLLRYSGFFAPARFADRDLSIESGYALSSLAALAHDQILIHGQGGGLGRGGQDGGAANDDGLDGGQVHALGIAPGSSIRLDPKNRERPSSTTVVAQRMRVALAMIANVQIVVEKLAAQHGGPRRRQQAIVYLETLKALARLLLLACTREMVVGGGSYVSGGNRRTPPLGNRNKAGA---WREVDLNGARLNQAQSSEFAV---DRPPSPPCPPPEVYTGKRSGVKLIVPPRASVVWSGRGRSNRSGGVSRLAATASSPSCGS-------------SRRSADGVF-----QNDSSSSSSFRGCANGGQGIGTGGSMEAAS--DESCV---WRQRREAQGG----------------QAWLMAGEVIHILRPLAYSYGCAATGERSWRPWLISLGMDAAAFACTARAGGSSGAMALLTPIGEAGSSG--VPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A835Z8Q5_9STRA (Peroxisomal membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q5_9STRA)

HSP 1 Score: 219 bits (559), Expect = 3.550e-59
Identity = 178/502 (35.46%), Postives = 233/502 (46.41%), Query Frame = 1 
Query:   79 YAKFVTENTTAARTLESLLQYSGFFAPARFADRDLSIESGYALSSLAALAHDRILLQGQESLRRGGGDRGTIFFGNTDGDQSPDAPKRRDRPSSMTAVAERMRVALAMIAHVQVVVEKLAGQHGGLRRRRQAITYLETLKALSRLLLLACTREMVVGGGAYVSGGKQRSQPRQDRNKSGASRPWREVDLREVRLDHPQSSEFAAANANYPPSLSRCPPEVYTGKRSGVRLVVPPRASVIWSGRGRSNRPIGVGRAATTSSFPSSSSLCDGEGDRSSSCSQRSPGEG----GFCSTCWARDSGSNPRLSFHGHGGQEIGAGSSSSGATNGERPCVVEGWRHQRQAQEGSSGTALSPREGACGRSQAWLMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARA---GGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLL 1563
            Y+ FV  N   A  LES+L+YSGF APA+F +R+L +E+GYA SSLA L HD I    Q+  +R  G       G+ +G                  V   +R AL ++AH++VV EK+A   GG  RRRQ IT +E  KA+ RL +LA TREM++ GG +  G          R ++ A R    V L  V L     +E    +   PP      P +Y GKR G +  +P RA                   A   S P      +G     + CS    G      G  S C  + +           GG   GAG  +    +GE        RH+R    G +     P+        AWL+ GE +H +RP  +S +CG  GE +W PWL S+++D A+ ACTARA    GGR                       L  EQ AELRRRK+ W LYL+R+PAFEL   P   GAAG F GVP+LGG+A YAL MLL
Sbjct:   10 YSAFVKANPGTANLLESVLRYSGFLAPAQFGERELLVEAGYAASSLAGLLHDGINAPQQQHQQRSTG-------GHEEG------------------VVATLRTALVVLAHIEVVAEKVAAASGGAVRRRQLITAIEVAKAVMRLTILALTREMLLAGGHHAPGAPPL------RGQTIAGRVGSRV-LSTVGLGLEDRAENGTGHG--PPPA----PVMYQGKRCGRKYALPARAQ------------------ARHGSAPGLRLGANGSAPALNGCSSAQNGSHTDMYGAASCCGLQHAACG--------GGHGDGAGWMAEEDEDGELE------RHRRWLHAGRAPAPPPPK--------AWLLLGEGLHAIRPAAYSAACGRLGEAAWAPWLLSMSVDVASRACTARAVEVRGGRGNG------------------GALTPEQRAELRRRKVQWVLYLLRTPAFELLLGPAATGAAGAFGGVPVLGGLASYALQMLL 415
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A1V9ZIW7_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIW7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 9.330e-18
Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 1 
Query: 1141 ACGRSQAWLMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAGGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYAL-NMLLYVQRHHFYTSAS 1599
            A G   +  +TGE++HILRP++++  C    E+SW P+L S + +     C++R    +  S                  P   EE     RRRKM  FLYL+R+P F     P+  G A   + VPLLG +  +A+ N LLY QR HFYTSAS
Sbjct:  217 ASGHEDSLQLTGELLHILRPVIYAVLCQRKTEQSWLPFLASFSTEVLGILCSSREPSAKKAS------------------PAATEEW----RRRKMCLFLYLLRNPFFSNVTHPLAEGVANATQPVPLLGRLVQFAIENGLLYYQRRHFYTSAS 348
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A067BFH5_SAPPC (Peroxisomal membrane protein PEX16 n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BFH5_SAPPC)

HSP 1 Score: 90.5 bits (223), Expect = 4.360e-16
Identity = 55/154 (35.71%), Postives = 77/154 (50.00%), Query Frame = 1 
Query: 1141 ACGRSQAWLMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAGGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYAL-NMLLYVQRHHFYTSAS 1599
            A G      +TGE++HILRP+V++  C    E+SW P+L S + +     C++     +A                    P + EE     RRRKM  FLYL+R+P F     P+    A   + VP+LG +  +A+ N LLY QR HFYTSAS
Sbjct:  195 ASGHEGPLQLTGEILHILRPVVYAVLCQRKSEQSWVPFLASFSTEVLGLLCSSAEAPTKAT-------------------PAVTEE----FRRRKMCLFLYLLRNPLFSSVTNPLADSVANATQPVPVLGRLIQFAIDNGLLYYQRRHFYTSAS 325
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: W7TST8_9STRA (Peroxisomal membrane protein PEX16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST8_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.170e-16
Identity = 150/547 (27.42%), Postives = 209/547 (38.21%), Query Frame = 1 
Query:   76 SYAKFVTENTTAARTLESLLQYSGFFAPARFADR---DLSIESGYALSSLAALAHDRILLQGQESLRRGGGDRGTIFFGNTDGDQSPDAPKRRDRPSSMTAVAERMRVALAMIAHVQVVVEKLAGQHGGLRRRRQAITYLETLKALSRLLLLACTREMVVGGGAYV---SGGKQRSQPRQDRNKSGASRPWREVDLREVRLDHPQSSEFAAANANYPPS---LSRCPPEVYTGKRSGVRLVVPPRASVIWSGRGRSNRPIGVGRAATTSSFPSSSSLCDGEGDRSSSCSQRSPGEGGFCSTCWARDSGSNPRLSFHGHGGQEIGAGSSSSGATNGERPCVVEGWRHQRQAQEGSSGTALSPREGACGRSQAWLMTGEVIHILRPLVFSY----------------------------SCGSAGEKSWRPWLTSLAMDAAAFACTARA--GGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 1599
            SY  FV  +    R LE L++   FF P+RF +    ++  E   A S++  L +D +LL          G R T           P  PK  DR          + + L +I+H +V+ EK++ + G        + +LE LK L RL L++  ++   GG A V    GG  R+ P   R    A RP          L    S   +    +       L   P EV   KR+  R          W  RGR           T   F   S   +G+ D  S+  +   G+   C+  W   S S    S       E GA +S S  T G+   V  G    R+ +           E A  R++  L+ GE++HILRPLV +                                SA  +S    L +L MD  ++ CT  A  GG  A                      L +    ELRRRK LW LYL+R+P FE    PV R   G    +PL+GG+A Y+   L+Y+QRH   TS S
Sbjct:    6 SYISFVRNHALFVRPLEGLIRTVTFFLPSRFYENGNGEIVSEGALAASNVMTLVNDLVLL----------GPRNT-----------PLLPKEEDR----------LGLTLLLISHTEVLAEKISMRLGD-GTDHLVVLWLEALKVLLRLRLVSLQQQH--GGNANVVLLDGG--RAIPTFHRPVESA-RPSSSTPGETSSLGVKNSGATSGVEEDQEDEEVLLRVLPEEVARPKRAECR------EGQEWK-RGR----------RTGRKFRYFSESYNGDDDYGSN--RHLIGDLTRCNARWTLSSPSPSSASSS----TESGASTSPSAPTTGDCEGVAVGIEWTREERP----------EVAQARARL-LLAGEILHILRPLVLASLRWALARRRRVKGRAVAAPPMGRSLRRGPLHSAAPESLLVLLPAL-MDLVSYQCTTGALNGGDNA----------------------LKQSCEDELRRRKNLWLLYLLRTPVFEGLTHPVTRAVDGSLVRLPLVGGLASYSYQALIYIQRHFTLTSGS 458
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A1W0AC00_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC00_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.730e-15
Identity = 57/154 (37.01%), Postives = 80/154 (51.95%), Query Frame = 1 
Query: 1141 ACGRSQAWLMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAGGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYAL-NMLLYVQRHHFYTSAS 1599
            A G   +  + GEV+HILRP++++  C    E+SW P+L S + +    AC++ AG   +  L                   +D   A ELRRRKM   LYL+R+P F    +P+    A   + VPLLG +  +A+ N L Y QR HFYTSAS
Sbjct:  183 ASGHEGSIQLAGEVLHILRPVIYAILCQRKTEQSWIPFLASFSTEILGIACSS-AGLEHSNKLS------------------VDPLVAEELRRRKMCLLLYLLRNPFFSSATQPLADNVANATKPVPLLGRLLQFAIDNGLHYYQRRHFYTSAS 317
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A7R9U860_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U860_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.860e-13
Identity = 62/190 (32.63%), Postives = 83/190 (43.68%), Query Frame = 1 
Query: 1132 REGACGRSQA--WLMTGEVIHILRPLVFSY-------------SCGSAGEKSWRPWLT-------SLAMDAAAFACTARAG------GGRAMSLLXXXXXXXXXXXXIPVLPYLDE------EQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 1599
            RE A  RS+    L+ GE++HILRP +F                 G     S+  WL            D ++ A  AR        G R+   L            +     L        EQ  ELRRRKM W LYL+RSP F+L  EPV +    V    PL+G ++ YA+ +L+++Q HHFYTS S
Sbjct:  158 RESAEARSEGDGLLLLGEILHILRPFLFCVIERLVLRRQLRRLGKGEGPPNSYGSWLLLAGSFWMDFLSDRSSGAALARREVDLLELGVRSAESLRSTTGPRTGTGILTREASLTRAMMRFAEQKEELRRRKMQWLLYLLRSPLFQLICEPVAKTTDKVLGRAPLIGSLSNYAMQLLMHIQSHHFYTSGS 347
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A2D4C8Q0_PYTIN (Peroxisomal membrane protein PEX16 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8Q0_PYTIN)

HSP 1 Score: 80.1 bits (196), Expect = 1.320e-12
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 1 
Query: 1165 LMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAGGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLL-YVQRHHFYTSAS 1599
            L+TGE++HI+RP+ F+      GE SW P L ++ +++A+F CT  +      +L                     +  A EL  RKM   LYL+R P +    +PV     GV + VPLLG +       +L Y    HFYTSAS
Sbjct:  195 LLTGELLHIIRPVAFAMLRRRRGETSWLPALVAVLIESASFVCTTSSSLSEGATLSTTGIS--------------SKRAAEELASRKMALLLYLLRDPVYASVTKPVTEAVCGVTDYVPLLGRLVRLVSTGILDYYHNFHFYTSAS 326
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: A0A8J5SHV7_ZIZPA (Peroxisomal membrane protein PEX16 n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SHV7_ZIZPA)

HSP 1 Score: 77.4 bits (189), Expect = 5.150e-12
Identity = 52/158 (32.91%), Postives = 74/158 (46.84%), Query Frame = 1 
Query: 1141 ACGRSQAWLMTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAG-----GGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 1599
            A G S      GEV+HI RPLV+       G +SW PWL SLA++  +    +RA      GGR                    + +L   +  EL+RRKM+W LY+MR P F  + +   + A  V   VPL+G + G  + ++   Q  + YTS S
Sbjct:  135 AKGVSGRLFFLGEVVHIFRPLVYVLLIRKFGIRSWTPWLMSLAVEITSLGMHSRATDLHNRGGR--------------------VHHLSSAERDELKRRKMMWALYVMRDPFFANYTKRHLQKAEKVLNPVPLIGFLTGKLVELVEGAQTRYTYTSGS 272
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BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Match: U5DG66_AMBTC (Peroxisomal membrane protein PEX16 n=1 Tax=Amborella trichopoda TaxID=13333 RepID=U5DG66_AMBTC)

HSP 1 Score: 73.9 bits (180), Expect = 7.540e-12
Identity = 44/144 (30.56%), Postives = 67/144 (46.53%), Query Frame = 1 
Query: 1168 MTGEVIHILRPLVFSYSCGSAGEKSWRPWLTSLAMDAAAFACTARAGGGRAMSLLXXXXXXXXXXXXIPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLGGMAGYALNMLLYVQRHHFYTSAS 1599
            + GEV+ I RPLV+       G +SW+PW+ SLA+D AA    +    G    +L                     E+  EL+RRK+LW LYL+R P F  ++             +PL+G +    + +++  Q  + YTSAS
Sbjct:   28 LLGEVLFITRPLVYVLFIRKHGVRSWKPWMLSLAVDFAAMGILSFVTNGGKHHIL-------------------SSEETNELKRRKLLWALYLLRDPFFSKYSRCRIENTEKYLNPIPLVGFLTAKFVELIIGAQTRYTYTSAS 152
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig486.12770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC96_ECTSI9.150e-20063.25Peroxisomal membrane protein PEX16 n=2 Tax=Ectocar... [more]
A0A835Z8Q5_9STRA3.550e-5935.46Peroxisomal membrane protein-domain-containing pro... [more]
A0A1V9ZIW7_9STRA9.330e-1837.01Peroxisomal membrane protein PEX16 n=1 Tax=Achlya ... [more]
A0A067BFH5_SAPPC4.360e-1635.71Peroxisomal membrane protein PEX16 n=3 Tax=Saprole... [more]
W7TST8_9STRA5.170e-1627.42Peroxisomal membrane protein PEX16 n=2 Tax=Monodop... [more]
A0A1W0AC00_9STRA1.730e-1537.01Peroxisomal membrane protein PEX16 n=1 Tax=Thraust... [more]
A0A7R9U860_9STRA3.860e-1332.63Peroxisomal membrane protein PEX16 n=1 Tax=Pinguio... [more]
A0A2D4C8Q0_PYTIN1.320e-1233.56Peroxisomal membrane protein PEX16 n=1 Tax=Pythium... [more]
A0A8J5SHV7_ZIZPA5.150e-1232.91Peroxisomal membrane protein PEX16 n=1 Tax=Zizania... [more]
U5DG66_AMBTC7.540e-1230.56Peroxisomal membrane protein PEX16 n=1 Tax=Amborel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig486contigL-elsbetiae_contig486:8326..12256 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score585.1
Seed ortholog evalue3.2e-164
Seed eggNOG ortholog2880.D8LC96
Preferred namePEX16
KEGG koko:K13335
KEGG TC3.A.20.1,9.A.17.1
KEGG Pathwayko04146,map04146
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000038,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0005783,GO:0005789,GO:0006082,GO:0006605,GO:0006612,GO:0006625,GO:0006629,GO:0006631,GO:0006633,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007276,GO:0007283,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016557,GO:0016558,GO:0017038,GO:0019752,GO:0019953,GO:0022406,GO:0022412,GO:0022414,GO:0022615,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0031984,GO:0032501,GO:0032504,GO:0032581,GO:0032787,GO:0033036,GO:0033365,GO:0034613,GO:0042175,GO:0042579,GO:0042760,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043574,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044743,GO:0045046,GO:0045184,GO:0046394,GO:0046395,GO:0046907,GO:0048137,GO:0048232,GO:0048609,GO:0051179,GO:0051234,GO:0051301,GO:0051641,GO:0051649,GO:0051704,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071806,GO:0071840,GO:0072329,GO:0072330,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0090150,GO:0098588,GO:0098805,GO:0098827,GO:0106101,GO:1901575,GO:1901576
EggNOG free text desc.ER-dependent peroxisome localization
EggNOG OGsKOG4546@1,KOG4546@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Ec32 ortholog descriptionPeroxisome membrane protein, Pex16
Ec32 orthologEc-14_005580.1
Exons4
Model size1953
Cds size1572
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig486.12770.1prot_L-elsbetiae_contig486.12770.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig486 8677..12226 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816478.4165149-UTR-L-elsbetiae_contig486:8325..86761622816478.4165149-UTR-L-elsbetiae_contig486:8325..8676Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig486 8326..8676 -
1691683589.1046326-UTR-L-elsbetiae_contig486:8325..86761691683589.1046326-UTR-L-elsbetiae_contig486:8325..8676Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig486 8326..8676 -
1622816478.4733453-UTR-L-elsbetiae_contig486:12226..122561622816478.4733453-UTR-L-elsbetiae_contig486:12226..12256Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig486 12227..12256 -
1691683589.153614-UTR-L-elsbetiae_contig486:12226..122561691683589.153614-UTR-L-elsbetiae_contig486:12226..12256Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig486 12227..12256 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816478.429243-CDS-L-elsbetiae_contig486:8676..97201622816478.429243-CDS-L-elsbetiae_contig486:8676..9720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 8677..9720 -
1691683589.1195962-CDS-L-elsbetiae_contig486:8676..97201691683589.1195962-CDS-L-elsbetiae_contig486:8676..9720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 8677..9720 -
1622816478.4400074-CDS-L-elsbetiae_contig486:10852..110661622816478.4400074-CDS-L-elsbetiae_contig486:10852..11066Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 10853..11066 -
1691683589.1286561-CDS-L-elsbetiae_contig486:10852..110661691683589.1286561-CDS-L-elsbetiae_contig486:10852..11066Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 10853..11066 -
1622816478.4512408-CDS-L-elsbetiae_contig486:11571..117561622816478.4512408-CDS-L-elsbetiae_contig486:11571..11756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 11572..11756 -
1691683589.1369631-CDS-L-elsbetiae_contig486:11571..117561691683589.1369631-CDS-L-elsbetiae_contig486:11571..11756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 11572..11756 -
1622816478.4632158-CDS-L-elsbetiae_contig486:12097..122261622816478.4632158-CDS-L-elsbetiae_contig486:12097..12226Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 12098..12226 -
1691683589.1450706-CDS-L-elsbetiae_contig486:12097..122261691683589.1450706-CDS-L-elsbetiae_contig486:12097..12226Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 12098..12226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig486.12770.1

>prot_L-elsbetiae_contig486.12770.1 ID=prot_L-elsbetiae_contig486.12770.1|Name=mRNA_L-elsbetiae_contig486.12770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=524bp
MEQLQHDPRGAEDGWSYAKFVTENTTAARTLESLLQYSGFFAPARFADRD
LSIESGYALSSLAALAHDRILLQGQESLRRGGGDRGTIFFGNTDGDQSPD
APKRRDRPSSMTAVAERMRVALAMIAHVQVVVEKLAGQHGGLRRRRQAIT
YLETLKALSRLLLLACTREMVVGGGAYVSGGKQRSQPRQDRNKSGASRPW
REVDLREVRLDHPQSSEFAAANANYPPSLSRCPPEVYTGKRSGVRLVVPP
RASVIWSGRGRSNRPIGVGRAATTSSFPSSSSLCDGEGDRSSSCSQRSPG
EGGFCSTCWARDSGSNPRLSFHGHGGQEIGAGSSSSGATNGERPCVVEGW
RHQRQAQEGSSGTALSPREGACGRSQAWLMTGEVIHILRPLVFSYSCGSA
GEKSWRPWLTSLAMDAAAFACTARAGGGRAMSLLIPVGVGAGDGDGIPVL
PYLDEEQAAELRRRKMLWFLYLMRSPAFELFAEPVGRGAAGVFEGVPLLG
GMAGYALNMLLYVQRHHFYTSAS*
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mRNA from alignment at L-elsbetiae_contig486:8326..12256-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig486.12770.1 ID=mRNA_L-elsbetiae_contig486.12770.1|Name=mRNA_L-elsbetiae_contig486.12770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3931bp|location=Sequence derived from alignment at L-elsbetiae_contig486:8326..12256- (Laminarionema elsbetiae ELsaHSoW15)
GGGGCAACAGGCCCCAGGAGCTAGATTGAGATGGAGCAACTGCAGCACGA
TCCGCGCGGTGCTGAAGATGGATGGTCTTATGCCAAATTCGTGACGGAAA
ATACCACGGCGGCACGCACGTTAGAGAGTCTCCTTCAATACTCCGGCTTC
TTCGCTCCGGTGAGGCCCCTGAAACGCGCCGCAACAACAACAGAGAGCAG
ATGATAGACGAGCCGAGTACGGTAGCAGTAGGGATTCGGTTTGTATGTCT
CCCCTCATGGCTTGCTTGAAGTCAAGAGGAGAAACAAATGTTGGTCATGC
CTTTTGACGGCGGACCTCTCTGCTGTATCTGCTCTCGGGTGGGAGACGAC
GCCCCCGCCGTTCCTGCATGGGACACCCACGAGGCGCCGCCTTCAGCGCC
ACGCCACATCTCACACAAACAGGCTGGAGTCACCGCCACCACACTGACGC
CCCCTGATTTTGCGCCTCTTTCCAAAATGTCAACTGTACTCTTGGTCCAG
GCCCGCTTTGCAGACAGAGATCTTTCTATCGAGTCCGGCTATGCCTTGTC
TAGCCTGGCCGCCTTGGCCCATGACCGAATCCTGCTTCAAGGGCAAGAAA
GCCTGAGACGAGGGGGGGGTGACAGGGGCACCATTTTTTTTGGCAATACC
GATGGCGACCAATCGCCGGATGCTCCCAAGCGGCGGTGAGAACCCAGAAC
CTACGCACACGGGTGGCAGCAATGCCAGCAGGCACACCATCTTAACCTCT
TCCCTGCGACGTCTGGTAAATACTACTGAACCATGTGTGTTGCTACGCCG
GGTAGAGTGGCCACGAGCCACACAGTTGTTCAGCGCAGTTTTCGTGCGGC
GATTCTAGCGTGCCATAGTAGCACGTTGGGAGTGATTTTCTGCGTTTTTC
AACGCTTTGCGGATGTAAGTCATGTCTGCGGATCGTTTGTTTCTCTATTC
GCTTTCCGAGTTGAACCGGCGTTTTGTACGCCACTGCATTCCACGCTGCA
TTCTATGAGAACCCGATAGCCCAGTGTATATTGAACTTCCGCTCTTTAAT
CTGAATCGTATTGATAACTGTAGAAGTTTGGCACACGATTTGTGTATCTT
CTCCCGTTTTTTTAAGAAACCCTCTGCGTGGTCGTTGGTGTGGCGCTTGT
ATCTGCTCTCCGGGGTGATTTGTGCGTGCTTTGCTTACAGAGACCGGCCG
TCTTCGATGACAGCCGTCGCCGAGAGGATGCGCGTAGCCCTGGCAATGAT
AGCCCACGTGCAGGTCGTCGTGGAGAAGCTGGCCGGGCAGCACGGAGGGC
TGCGGAGGAGACGGCAGGCCATTACCTACCTGGAGACGCTTAAGGCCTTG
AGCCGACTCCTGCTCCTTGCGTGCACGCGGGAAATGGTGGTGGGAGGTGG
CGCGGTGAGAGCATTCTTTTTTTCTTTTGCGACGCGTGCGTTGCAGTTAA
TGCCTATGTTTTCATCTTGTTACTGCTTCCCTTAAAGTAGACCACGATCA
GTGGCCCGATGGCGTCCCCTGGTGTACTGGACCATCCGGATCAATTTTTT
ATCTTGATTTTAAACACAAGCTGTCGAAATGCCCGACAAATTTAAAAAAA
TGGTGCACCATCTCCTTGGCCGGTAGCTTATGCATTCATATTGAAGGACA
CCCAAAAGAGTAACATAGCCGGGGGGCAGGCTTGAAATGGATCCTTGTGC
CTCAAGTGGCGGTGTGCTAAAATAGGGTTTAGGGTGTTTCGGGACTGCTA
TAAAAATGCGCTCTAACTCCGACCTTCAGCCTATGGCGGCGCACACCATA
ACTCTCATGCCCAACCAGAGGCTACGAGGAGACACAGGTGTACTCGAATA
GTATCTCAGAGCAACCTCTGGCGTCCTCAGCAGCGTTGGCAGCCCTGTTT
TGAAATGACAGTGACGTTTGCCATGTCAAGAGCTTTACAGGAGTAACTTA
AGACTTTGTACGAGGAACGGAGGACAGCCAAAGGCCCTACATACAGCACC
GCTAAAGAAACGAAGGCTACGCGATGGTAGCTGTTGTCCTTGCCAAGGAG
AATGTGCACTATTTTAAATTGCGATGGCGCTTAGTGTAATAGCGAAAAGA
GACAAAAAAACATTTGCGCCGCTATATAACCGCCATTTGTCTGGAGTTTT
ACCGACCACCTACCAACTTCGTCAGTTATTGCCGGGTGCGGATCACAAAG
CACAACATGCCTCTTCACCTTTTCCGGAATTCGGCCTTTTCCCCTCACCC
ACGTGATCGTGGCCTACCTTAAGCTGCCGTTGGAAGACGGTTTCCGATGA
TACATGTTTTGAGCGAATCCGCAGGTCGACAGATACTTCCGCTGCGTAAA
AACCAGCCTGTTCCATGGGATTTGTTTTTTGTTTTTTATTTTTATCAGAG
CCTTTTACCGACTGATGAACAAGGTTACTTCACCGTAGGGTAGCCGTGCT
GAAACGCCCGCCATCCGCAACCCCCACACTCACCAACAAGAACCAATTTG
TGCCACCCAACCGCTGCTGAACATGTCTGTACGTAGTACGTTTCTGGGGG
TAAACAGAGGTCTCAGCCACGCCAAGATCGGAACAAGTCAGGGGCCAGCA
GACCGTGGAGAGAAGTTGACCTCAGGGAGGTCCGGTTAGACCACCCGCAA
TCCTCCGAGTTTGCGGCCGCCAACGCCAACTACCCCCCATCCCTCTCCCG
CTGCCCCCCCGAGGTATACACGGGGAAGCGGAGCGGCGTGAGATTGGTGG
TTCCGCCGCGCGCGAGCGTCATCTGGAGCGGACGAGGGCGTTCAAACCGC
CCGATCGGTGTCGGCAGAGCGGCGACCACTTCCTCCTTCCCGTCTTCCTC
GTCCTTGTGCGATGGTGAGGGCGATAGGAGCAGCAGCTGCTCTCAGCGAA
GCCCTGGCGAGGGGGGTTTCTGCAGTACTTGCTGGGCGAGGGATAGCGGC
AGCAATCCTCGACTTTCGTTCCACGGTCACGGTGGGCAGGAGATAGGCGC
AGGCAGTTCTAGCAGTGGAGCGACTAACGGCGAGCGTCCATGTGTTGTCG
AAGGATGGCGACATCAGCGACAAGCGCAAGAGGGTAGTAGCGGTACCGCT
CTTTCACCGCGGGAGGGGGCTTGTGGGAGGTCGCAAGCATGGCTTATGAC
GGGAGAAGTCATCCACATCTTGCGGCCGCTGGTGTTCAGCTACAGCTGCG
GGTCCGCCGGGGAGAAATCCTGGCGCCCATGGCTTACTTCTCTGGCAATG
GACGCTGCCGCTTTCGCCTGCACCGCGCGAGCCGGAGGCGGCAGGGCGAT
GTCTCTCTTGATCCCTGTCGGAGTCGGAGCAGGCGACGGCGACGGTATAC
CCGTGCTTCCTTACCTGGACGAGGAGCAAGCGGCCGAGCTGAGGCGCCGC
AAGATGCTGTGGTTCTTGTACCTGATGCGCTCTCCGGCGTTCGAGCTATT
TGCGGAGCCAGTTGGCAGAGGAGCCGCCGGCGTGTTCGAAGGGGTGCCGC
TCTTGGGCGGCATGGCAGGCTACGCACTCAACATGCTGCTCTACGTGCAA
CGACACCACTTCTACACATCAGCATCATGAGGACTTGAATAAACTCGCGG
CAGCATGTTTGCATTTTGTGACGGCGCGTCTCTTGTGTTTTGGTTATTGG
TTTGGCGGGTGGCAAAATGGCTCCCCTTGCCTGGAGCCAAGGTTAGATCC
GCAGAAGAGAGCATGGTTGGGCGGCAAGCTCACGCGTGCCTGCTGATTCG
CGACTTCAAAGTTGACGGGTAGCCACGTTTAAGATTTTCTTTTTTGCTCG
TGAATGGATGCGCAACAAAGGTGCAGGGTTGGCTTGTGAAATCACGAGCC
TGTTTTGGTTTAGGGCTGTCTGTAGGTTCATGTTTGATGGTTGTACGATC
TTGGTCAGCTAAACCTAGCTCATCGGTCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig486:8326..12256-

>mRNA_L-elsbetiae_contig486.12770.1 ID=mRNA_L-elsbetiae_contig486.12770.1|Name=mRNA_L-elsbetiae_contig486.12770.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3144bp|location=Sequence derived from alignment at L-elsbetiae_contig486:8326..12256- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCAACTGCAGCACGATCCGCGCGGTGCTGAAGATGGATGGTCTTA
TGCCAAATTCGTGACGGAAAATACCACGGCGGCACGCACGTTAGAGAGTC
TCCTTCAATACTCCGGCTTCTTCGCTCCGATGGAGCAACTGCAGCACGAT
CCGCGCGGTGCTGAAGATGGATGGTCTTATGCCAAATTCGTGACGGAAAA
TACCACGGCGGCACGCACGTTAGAGAGTCTCCTTCAATACTCCGGCTTCT
TCGCTCCGGCCCGCTTTGCAGACAGAGATCTTTCTATCGAGTCCGGCTAT
GCCTTGTCTAGCCTGGCCGCCTTGGCCCATGACCGAATCCTGCTTCAAGG
GCAAGAAAGCCTGAGACGAGGGGGGGGTGACAGGGGCACCATTTTTTTTG
GCAATACCGATGGCGACCAATCGCCGGATGCTCCCAAGCGGCGGCCCGCT
TTGCAGACAGAGATCTTTCTATCGAGTCCGGCTATGCCTTGTCTAGCCTG
GCCGCCTTGGCCCATGACCGAATCCTGCTTCAAGGGCAAGAAAGCCTGAG
ACGAGGGGGGGGTGACAGGGGCACCATTTTTTTTGGCAATACCGATGGCG
ACCAATCGCCGGATGCTCCCAAGCGGCGAGACCGGCCGTCTTCGATGACA
GCCGTCGCCGAGAGGATGCGCGTAGCCCTGGCAATGATAGCCCACGTGCA
GGTCGTCGTGGAGAAGCTGGCCGGGCAGCACGGAGGGCTGCGGAGGAGAC
GGCAGGCCATTACCTACCTGGAGACGCTTAAGGCCTTGAGCCGACTCCTG
CTCCTTGCGTGCACGCGGGAAATGGTGGTGGGAGGTGGCGCGAGACCGGC
CGTCTTCGATGACAGCCGTCGCCGAGAGGATGCGCGTAGCCCTGGCAATG
ATAGCCCACGTGCAGGTCGTCGTGGAGAAGCTGGCCGGGCAGCACGGAGG
GCTGCGGAGGAGACGGCAGGCCATTACCTACCTGGAGACGCTTAAGGCCT
TGAGCCGACTCCTGCTCCTTGCGTGCACGCGGGAAATGGTGGTGGGAGGT
GGCGCGTACGTTTCTGGGGGTAAACAGAGGTCTCAGCCACGCCAAGATCG
GAACAAGTCAGGGGCCAGCAGACCGTGGAGAGAAGTTGACCTCAGGGAGG
TCCGGTTAGACCACCCGCAATCCTCCGAGTTTGCGGCCGCCAACGCCAAC
TACCCCCCATCCCTCTCCCGCTGCCCCCCCGAGGTATACACGGGGAAGCG
GAGCGGCGTGAGATTGGTGGTTCCGCCGCGCGCGAGCGTCATCTGGAGCG
GACGAGGGCGTTCAAACCGCCCGATCGGTGTCGGCAGAGCGGCGACCACT
TCCTCCTTCCCGTCTTCCTCGTCCTTGTGCGATGGTGAGGGCGATAGGAG
CAGCAGCTGCTCTCAGCGAAGCCCTGGCGAGGGGGGTTTCTGCAGTACTT
GCTGGGCGAGGGATAGCGGCAGCAATCCTCGACTTTCGTTCCACGGTCAC
GGTGGGCAGGAGATAGGCGCAGGCAGTTCTAGCAGTGGAGCGACTAACGG
CGAGCGTCCATGTGTTGTCGAAGGATGGCGACATCAGCGACAAGCGCAAG
AGGGTAGTAGCGGTACCGCTCTTTCACCGCGGGAGGGGGCTTGTGGGAGG
TCGCAAGCATGGCTTATGACGGGAGAAGTCATCCACATCTTGCGGCCGCT
GGTGTTCAGCTACAGCTGCGGGTCCGCCGGGGAGAAATCCTGGCGCCCAT
GGCTTACTTCTCTGGCAATGGACGCTGCCGCTTTCGCCTGCACCGCGCGA
GCCGGAGGCGGCAGGGCGATGTCTCTCTTGATCCCTGTCGGAGTCGGAGC
AGGCGACGGCGACGGTATACCCGTGCTTCCTTACCTGGACGAGGAGCAAG
CGGCCGAGCTGAGGCGCCGCAAGATGCTGTGGTTCTTGTACCTGATGCGC
TCTCCGGCGTTCGAGCTATTTGCGGAGCCAGTTGGCAGAGGAGCCGCCGG
CGTGTTCGAAGGGGTGCCGCTCTTGGGCGGCATGGCAGGCTACGCACTCA
ACATGCTGCTCTACGTGCAACGACACCACTTCTACACATCAGCATCATGA
TACGTTTCTGGGGGTAAACAGAGGTCTCAGCCACGCCAAGATCGGAACAA
GTCAGGGGCCAGCAGACCGTGGAGAGAAGTTGACCTCAGGGAGGTCCGGT
TAGACCACCCGCAATCCTCCGAGTTTGCGGCCGCCAACGCCAACTACCCC
CCATCCCTCTCCCGCTGCCCCCCCGAGGTATACACGGGGAAGCGGAGCGG
CGTGAGATTGGTGGTTCCGCCGCGCGCGAGCGTCATCTGGAGCGGACGAG
GGCGTTCAAACCGCCCGATCGGTGTCGGCAGAGCGGCGACCACTTCCTCC
TTCCCGTCTTCCTCGTCCTTGTGCGATGGTGAGGGCGATAGGAGCAGCAG
CTGCTCTCAGCGAAGCCCTGGCGAGGGGGGTTTCTGCAGTACTTGCTGGG
CGAGGGATAGCGGCAGCAATCCTCGACTTTCGTTCCACGGTCACGGTGGG
CAGGAGATAGGCGCAGGCAGTTCTAGCAGTGGAGCGACTAACGGCGAGCG
TCCATGTGTTGTCGAAGGATGGCGACATCAGCGACAAGCGCAAGAGGGTA
GTAGCGGTACCGCTCTTTCACCGCGGGAGGGGGCTTGTGGGAGGTCGCAA
GCATGGCTTATGACGGGAGAAGTCATCCACATCTTGCGGCCGCTGGTGTT
CAGCTACAGCTGCGGGTCCGCCGGGGAGAAATCCTGGCGCCCATGGCTTA
CTTCTCTGGCAATGGACGCTGCCGCTTTCGCCTGCACCGCGCGAGCCGGA
GGCGGCAGGGCGATGTCTCTCTTGATCCCTGTCGGAGTCGGAGCAGGCGA
CGGCGACGGTATACCCGTGCTTCCTTACCTGGACGAGGAGCAAGCGGCCG
AGCTGAGGCGCCGCAAGATGCTGTGGTTCTTGTACCTGATGCGCTCTCCG
GCGTTCGAGCTATTTGCGGAGCCAGTTGGCAGAGGAGCCGCCGGCGTGTT
CGAAGGGGTGCCGCTCTTGGGCGGCATGGCAGGCTACGCACTCAACATGC
TGCTCTACGTGCAACGACACCACTTCTACACATCAGCATCATGA
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