mRNA_L-elsbetiae_contig486.12767.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig486.12767.1
Unique NamemRNA_L-elsbetiae_contig486.12767.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A6H5KH94_9PHAE (GH16 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH94_9PHAE)

HSP 1 Score: 714 bits (1842), Expect = 2.230e-253
Identity = 334/395 (84.56%), Postives = 360/395 (91.14%), Query Frame = 1
Query:  268 SLAFLALGG-VDASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDPLKNIGKVNSPYVSTTLQLAPGIPLHRPTNGELLSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVP--------GVGGHLKWYIDDVLVLGIDGDTVEKHGTQIPDEPSYVILNTAVSSSWGFPIPCP 1425
            S   L LG  V A W+DPDT E  KT+ SLHDG+EYELIMSDEFEV+GRSFDDGHDPMWTS THSDDAQTSNGLGSQ FYN+SYGTTTKGS+NITTTDEST WRGYNPYKRKYE LSKSYRSSM+NTWNKFCFTGGIIE++AKLPGEH+IGGLWPAFW+LGNLGRATYEASTNLIWPWSY+KCDPKLQRAQEISACNKINHFGLHGYQGRGSTEID++EAQPG SDDPL N+GKVNSPY+STTLQLAPGIP+HRPTNGELLSP +TWYEGM+F +NS+LNY+FYGMHVDKTTPQEPVYRGADQAYIADAISGLT L RTHFHEYHNYKL+WVP        G  GHLKWYIDD +VLGID +TVEKHGTQIP+EPSYVILNTAVSSSWGFP PCP
Sbjct:   58 SWTLLVLGRRVGAGWIDPDTPEAAKTIRSLHDGAEYELIMSDEFEVSGRSFDDGHDPMWTSTTHSDDAQTSNGLGSQQFYNSSYGTTTKGSMNITTTDESTTWRGYNPYKRKYETLSKSYRSSMVNTWNKFCFTGGIIEIDAKLPGEHNIGGLWPAFWLLGNLGRATYEASTNLIWPWSYDKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDILEAQPGTSDDPLMNLGKVNSPYLSTTLQLAPGIPVHRPTNGELLSPENTWYEGMQFAENSSLNYHFYGMHVDKTTPQEPVYRGADQAYIADAISGLTSLTRTHFHEYHNYKLEWVPPPPTRGDAGPRGHLKWYIDDEMVLGIDAETVEKHGTQIPNEPSYVILNTAVSSSWGFPDPCP 452          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A835YN37_9STRA (Beta-1,6-glucan active enzyme, family GH16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN37_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 2.110e-176
Identity = 238/377 (63.13%), Postives = 290/377 (76.92%), Query Frame = 1
Query:  301 ASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDP-LKNIGKVNSPYVSTTLQLAPGIPLHRPTNGELLSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGV-GGHLKWYIDDVLVLGIDGDTVEKHGTQIPDEPSYVILNTAVSSSWGFPIPCP 1425
            ASW+DPDT  +  T+ SL DG  ++LIMSDEF V GR+F DG DPMWT+  HSDDAQ+S G GS H+YN S   T+ G LNITTT E T W+GYNPYK+KYE L K+++S ++ TWNKFCFTGGIIEM A LPGEH+IGGLWPAFW+LGNLGRATYEASTNL+WPWSYN+C+ KLQ  QEISACN + HFG+H +QGRGSTEID+IE   G+   P +    K+  PY+S TLQ+APGI  HRP       P +TWYEGM +G N+T N++FYG+ VDKT P EPVYR   Q+Y AD IS +T L RTHF+++H YKL+W PG  GG+L WY+DD L+  ID  +++ +G+QIPDEPSYVILNTAV+SSWGFPIPCP
Sbjct:   28 ASWIDPDTPNKHTTMKSLKDGRIHKLIMSDEFNVKGRTFADGEDPMWTAELHSDDAQSSAGYGSLHYYNDSQVVTSHGCLNITTTSEKTQWKGYNPYKKKYEVLFKNFKSGLITTWNKFCFTGGIIEMRAILPGEHNIGGLWPAFWLLGNLGRATYEASTNLVWPWSYNRCNRKLQLGQEISACNGVKHFGMHAHQGRGSTEIDIIEVMAGKPGYPEIIEWDKIGLPYMSATLQVAPGIEDHRPEQDHQQQPENTWYEGMSYGPNTTQNFHFYGLLVDKTLPMEPVYRSEKQSYRADGISAITRLARTHFNDFHTYKLEWRPGADGGYLAWYLDDELLFEIDQASLDPYGSQIPDEPSYVILNTAVASSWGFPIPCP 404          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A7S3M1V3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1V3_9STRA)

HSP 1 Score: 429 bits (1102), Expect = 1.560e-143
Identity = 205/372 (55.11%), Postives = 262/372 (70.43%), Query Frame = 1
Query:  307 WVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDD-PLKNIGKVNSPYVSTTLQLAPGIP--LHRPTNGELLSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKWYIDDVLVLGIDGDTVEKHGTQIPDEPSYVILNTAVSSSWGFP 1413
            WVDPDT +  +TL S  DG  Y+L+MSDEFE  GRSF DGHDP WT     DD QT++G  S  FYNAS  TT  G+L ITTTDE T WRG+NPYK+KYE +S+ ++S ML +WNKFCFTGGI+E++ + PGE DIGGLWPA W+LGNLGRAT+++STNL+WPWSY  CD +LQ AQEIS C+   H+ LH  QGRG+TEID+IE  PG S   P+   G +  PY S TLQLAPGIP  L RP  G L     TWY  + +G+N+++N  FYG ++  T  +EPV R A+++Y  DAIS +  L+  HF + H ++L+W PG  G++ WY D     GI+   ++ +GT+IP EPSYVILNTA+S+SWGFP
Sbjct:   28 WVDPDTPQRKRTLKSYTDGLMYDLVMSDEFERPGRSFKDGHDPTWTGIDKPDDDQTASGKKSLQFYNASQITTRDGNLVITTTDEDTKWRGWNPYKKKYETMSRHFKSGMLQSWNKFCFTGGILEVDVQFPGESDIGGLWPAVWLLGNLGRATFQSSTNLMWPWSYTPCDRELQHAQEISGCDITTHYSLHPKQGRGATEIDMIEVMPGPSGKLPIVKNG-LQRPYNSMTLQLAPGIPAQLRRPPAGTLPEWGFTWYNNLTYGENTSINPFFYGHYLGPTKKEEPVGRTAEESYQCDAISSMMQLEDKHFKKMHTFRLEWQPGPNGYVHWYGDGKFRFGIEQSGLDPYGTEIPTEPSYVILNTAISTSWGFP 398          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A4D9CTT0_9STRA (GH16 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTT0_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 3.880e-136
Identity = 197/384 (51.30%), Postives = 264/384 (68.75%), Query Frame = 1
Query:  301 ASWVDPDTAEEFKTLNSLHDGS--EYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTK-GSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDPLK--NIGKVNSPYVSTTLQLAPGIPLHRPTNGELLSPAS---TWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKWYIDDVLVLGIDGDTVEK-HGTQIPDEPSYVILNTAVSSSWGFPIPCP 1425
            A WVDPD+    +  +SL D +     L+MSDEF V  R+F DGHDP WT+  HSDDA+TS G G+  +YN SY +TT+ G L ITTT EST W+G+NP+ +KYE   K +R +M+N+WNKFCF+GG++E + KLPG  D+GGLWPAFW++GNLGRATYE STNL+WPWS++ CD K Q AQEISAC++  H+ L   +GRG+TEID++EA  G+     K  ++G V  PY+S+TLQ++PG+  +RP  G+  +      TWY+G+ FG+ S +N  FYG  +DKT   EP  R   Q Y ADA+S LT L  TH+ ++H Y+L+W+PG  G+L WY+D  ++  +         G QIP EPSYVILNTAVS++WGFP  CP
Sbjct:   28 AGWVDPDSPHSVQRTHSLRDPNLPSLRLVMSDEFNVAARTFADGHDPTWTAGDHSDDARTSVGKGALIYYNHSYASTTEEGHLKITTTSESTQWKGFNPFTQKYEIFEKEFRGAMVNSWNKFCFSGGVVEASLKLPGPSDVGGLWPAFWLMGNLGRATYEHSTNLMWPWSFDVCDRKKQEAQEISACDRTTHWDLQQNKGRGATEIDIMEAMSGKPHKVTKKGDLG-VGVPYMSSTLQVSPGVEKNRPQAGKNFTEHQEEWTWYDGLRFGEKSKMNMYFYGTLLDKTQKDEPAGRSIHQVYQADAVSALTSLSATHWDDFHTYRLEWMPGPEGYLAWYLDGEMLYDVPASAFSNVTGAQIPVEPSYVILNTAVSTTWGFPETCP 410          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A7S1ZB15_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB15_TRICV)

HSP 1 Score: 387 bits (994), Expect = 6.220e-127
Identity = 200/415 (48.19%), Postives = 264/415 (63.61%), Query Frame = 1
Query:  295 VDASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGR-------SDDPLKNIGKVNSPYVSTTLQLAPGIPLHRPTNG------ELLSP-------ASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKWYID--------DVLVLGIDG---DTVEKH-----------GTQIPDEPSYVILNTAVSSSWGFP 1413
            V   W+DPDT EEF+T  SL DGSEY L+MSDEFE  GR+F DGHDP WT+   SDD  +++G GS HFYN+S  TT  G L I+TT E T W  Y+  K +++   K ++S M+ +W KFCFTGGI+E++  LPG+  IGGLWPA W+LGN+GRATYEASTN IWPWSY++CD  LQR Q ISAC++ NH+G++  QGRG+TEID++E   G        S DP      V  PY   TLQ+APG+P +RP +G      + L+P       A TWYEG+E   N+TLN  FYG ++ +T P+EPV R  ++A+ ADA+  +  L   HF + H ++L+W PG GG L WY          D  ++G DG   D V+ +           G++IP EPSY+I N A+SS+WGFP
Sbjct:   29 VRGGWIDPDTPEEFRTTKSLLDGSEYRLVMSDEFETPGRTFADGHDPTWTALDKSDDDYSASGGGSLHFYNSSSVTTKNGYLQISTTLEETKWNQYDDIKEEWKPQMKHFKSGMVQSWEKFCFTGGIVEVDIVLPGDPYIGGLWPAIWLLGNIGRATYEASTNNIWPWSYDECDRSLQRKQSISACDEANHYGMNPRQGRGATEIDILEGMMGDPEGQYLPSTDP-----PVALPYADMTLQVAPGVPENRPMSGFQPMRNDSLTPDGHTELMAQTWYEGLEVEGNTTLNPFFYGTYLGETKPEEPVTRTKEEAFQADAVGAMHQLTPAHFKKNHKFRLEWRPGRGGRLDWYAQSHANSQGKDGYLMG-DGKGEDWVKAYTLKDESLANLMGSKIPQEPSYLIFNIAISSTWGFP 437          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A7S2EFL5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EFL5_TRICV)

HSP 1 Score: 387 bits (994), Expect = 2.570e-124
Identity = 200/415 (48.19%), Postives = 264/415 (63.61%), Query Frame = 1
Query:  295 VDASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGR-------SDDPLKNIGKVNSPYVSTTLQLAPGIPLHRPTNG------ELLSP-------ASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKWYID--------DVLVLGIDG---DTVEKH-----------GTQIPDEPSYVILNTAVSSSWGFP 1413
            V   W+DPDT EEF+T  SL DGSEY L+MSDEFE  GR+F DGHDP WT+   SDD  +++G GS HFYN+S  TT  G L I+TT E T W  Y+  K +++   K ++S M+ +W KFCFTGGI+E++  LPG+  IGGLWPA W+LGN+GRATYEASTN IWPWSY++CD  LQR Q ISAC++ NH+G++  QGRG+TEID++E   G        S DP      V  PY   TLQ+APG+P +RP +G      + L+P       A TWYEG+E   N+TLN  FYG ++ +T P+EPV R  ++A+ ADA+  +  L   HF + H ++L+W PG GG L WY          D  ++G DG   D V+ +           G++IP EPSY+I N A+SS+WGFP
Sbjct:   29 VRGGWIDPDTPEEFRTTKSLLDGSEYRLVMSDEFETPGRTFADGHDPTWTALDKSDDDYSASGGGSLHFYNSSSVTTKNGYLQISTTLEETKWNQYDDIKEEWKPQMKHFKSGMVQSWEKFCFTGGIVEVDIVLPGDPYIGGLWPAIWLLGNIGRATYEASTNNIWPWSYDECDRSLQRKQSISACDEANHYGMNPRQGRGATEIDILEGMMGDPEGQYLPSTDP-----PVALPYADMTLQVAPGVPENRPMSGFQPMRNDSLTPDGHTELMAQTWYEGLEVEGNTTLNPFFYGTYLGETKPEEPVTRTKEEAFQADAVGAMHQLTPAHFKKNHKFRLEWRPGRGGRLDWYAQSHANSQGKDGYLMG-DGKGEDWVKAYTLKDESLANLMGSKIPQEPSYLIFNIAISSTWGFP 437          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A482SXU5_9ARCH (GH16 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXU5_9ARCH)

HSP 1 Score: 370 bits (949), Expect = 2.240e-122
Identity = 174/332 (52.41%), Postives = 231/332 (69.58%), Query Frame = 1
Query:  301 ASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDPLKNIGK-VNSPYVSTTLQLAPGIPLH--RPTNGELLSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKW 1287
            A W+DPDT  + +   +   G+ ++L+MSDEF   GR F +GHDPMWT    SDD QTS G  S  FYN+SY +T  GSL ITTT E T W+G+NPYK+KYE + + +RS ML +WNKFC+TGGI+E++ + PG HDIGGLWPA W+LGNLGRAT+EASTNL+WPWSY  CD  LQ+AQEIS C+  +HFGL+ +QGRG+TEID+IE  PG S  PL  + K ++ PY S TLQ+APGIPL+  RP  G L     TWY  + +G N+++N  FYG ++ +T   EP+ R   ++Y  DAIS +  +D ++F+  H ++L+W PG  G L W
Sbjct:   18 AGWIDPDTPMDKRQTKNHVTGAIFDLVMSDEFNRPGRKFKNGHDPMWTGIDRSDDDQTSQGRKSLQFYNSSYISTANGSLIITTTTEDTKWKGWNPYKKKYETMMRHFRSGMLQSWNKFCYTGGILEIDVQFPGRHDIGGLWPAVWLLGNLGRATFEASTNLMWPWSYEVCDRSLQKAQEISGCDITSHFGLNAHQGRGATEIDIIEVMPGPST-PLPIVKKNLSRPYNSMTLQVAPGIPLNKRRPFPGTLPEWGFTWYNNVTYGANTSINPFFYGTYLAQTKADEPIGRSKAESYQCDAISSMAQIDESYFNRMHTFRLEWEPGYNGSLTW 348          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A7S1BHS0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BHS0_9STRA)

HSP 1 Score: 377 bits (968), Expect = 1.110e-120
Identity = 187/396 (47.22%), Postives = 245/396 (61.87%), Query Frame = 1
Query:  301 ASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDPLKNIGKVNSPYVSTTLQLAPGIPLHRPTNGEL-------------LSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKWY------IDDVLVLGIDGDTVEKH------GTQIPDEPSYVILNTAVSSSWGFP 1413
            A+W+DPDT  EF +  S  DGS+Y L+MSDEF V+GR+F DG DP WT+    DD   ++G GS H+YN+S  +T  G LNI      T W   +P  +   + S++Y S ML  WNKFCFTGGI+E+   LPG   IGGLWPA W+LGNLGRATY ASTN +WPWSYNKCD + Q AQE+SACN  +H+GLH  QGRGSTEID+IE+  G+  +  +    +++PY   TLQ APGI + RPT G L             +S    WYEG+ +G+ +++N  FYG ++  T P+EPV R   QAY ADA++ +  L   HF + H ++L+W PG  G + WY       D      I G T+         G QIP EPSY+I+N A+SS+WGFP
Sbjct:   46 AAWIDPDTPSEFHSTASFVDGSKYRLVMSDEFNVDGRTFTDGDDPAWTALDKHDDIMDNSGFGSLHYYNSSAVSTAGGYLNIAARIGKTTWLSQDPVNKTIHEESRNYVSGMLQGWNKFCFTGGIVEVEVVLPGNPHIGGLWPAVWLLGNLGRATYMASTNRVWPWSYNKCDREKQPAQELSACNVDSHYGLHKNQGRGSTEIDIIESMSGKVGEIPETDPPISNPYADMTLQSAPGITVRRPTEGHLPARVETTGEYGYPMSLPQNWYEGLIYGNETSMNPYFYGTYLAPTKPEEPVQRSKKQAYQADALAAMFQLFPQHFRKTHKFRLEWQPGRDGRIDWYGQVPSKDDAAPPEWIHGYTIHDEFVRNQTGAQIPAEPSYLIMNIALSSNWGFP 441          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: K0TJA7_THAOC (GH16 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJA7_THAOC)

HSP 1 Score: 367 bits (942), Expect = 1.350e-119
Identity = 192/418 (45.93%), Postives = 255/418 (61.00%), Query Frame = 1
Query:  295 VDASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASY-GTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDPLKNIGK----VNSPYVSTTLQLAPGIPLHRPT-------------NGELLSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWVPGVGGHLKWY------ID-DVLVLGIDGDTV----------------EKHGTQIPDEPSYVILNTAVSSSWGFPIPCP 1425
            V+  W+D DT E  +T  SL DGS YEL+MSDEF + GRSF DGHDP WT+   SDD  +++G GS HFYN+S   TT  G L I +  E+T W  ++P K +++   K ++S  + +WNKFCFTGGI+E++  LPGE DIGGLWPA W+LGNLGRATYE STN++WPWSY+ CD K Q +Q +SACNK NHFGL+  QGRG+TEID+IE   G  D   +N+      +  PY   TLQ+APGI  +RP              +G   S A  WY+ +    N++LN  FYG ++ +T   EPV R  +QA+ ADA+  +  L   HF   H ++L+W PG GG L W+      +D +  V  ++GD                  E  G++IP+EPSYVILNTA+SS+W FP   P
Sbjct:   19 VECGWIDEDTPERLRTTKSLVDGSTYELVMSDEFNIPGRSFADGHDPTWTALDKSDDDYSASGGGSLHFYNSSMVSTTPDGFLTIQSLLETTQWNRHDPIKNEWKQEKKYFKSGNVQSWNKFCFTGGILEVDLILPGEPDIGGLWPAAWLLGNLGRATYEGSTNMLWPWSYDDCDRKKQESQMVSACNKANHFGLNKNQGRGATEIDLIELMGG--DSKGENLPATDPPIQLPYADLTLQIAPGITENRPQPGSQPIREIDRTHSGYATSVAQNWYDNLTVAGNTSLNPFFYGTYLGETKKNEPVTRNKNQAFQADAVGAMKQLVPEHFKTPHTFRLEWQPGRGGRLDWFTKSHKKVDGNGTVFHMEGDGKGQDWEHSLHIPDFALDEAMGSKIPEEPSYVILNTAISSTWAFPYDVP 434          
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Match: A0A7S2W6G7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6G7_9STRA)

HSP 1 Score: 359 bits (921), Expect = 3.720e-117
Identity = 180/383 (47.00%), Postives = 248/383 (64.75%), Query Frame = 1
Query:  295 VDASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSATHSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRKYEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGNLGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGSTEIDVIEAQPGRSDDPLKNIGKVNSPYVSTTLQLAPGIPLHRPTNGELLSPASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISGLTPLDRTHFHEYHNYKLDWV-----PGVGGHLKWYIDDVLVLGIDGDTVEKH-GTQIPDEPSYVILNTAVSSSWGFPIPCP 1425
            V   WVDPDTA+  +T  +L DG  ++L+ SDEF+V+ RSF DG DP WT A H +D  T+  L    FY+    TT+ G LNITT  E+T +  ++    KY    K ++S+M+  WNKFCFTGGI+E+ A LPGE  +GGLWPA W++GNL RATY  S+N +WPWS++KC   LQ+ Q +SACN   H+G+    GRG+ EID++EA PG    PL  +GK   PY ST+LQ+APGI ++RP  G    P   WYEGME+G NS++N  FYG           V +  D  Y +DA+SG T +D+  + ++H Y+L+W      P   G+++WY+DD L+ GI G+T+ +H  +++P EP Y+ILNTA+SS+WGFP PCP
Sbjct:   21 VGGGWVDPDTAQGDRTTRALVDGRTFDLVFSDEFDVDHRSFGDGEDPRWT-ALHKND-YTNTAL---QFYDKHLVTTSHGMLNITTVPETTEFLAFDDDTMKYHRSKKHFKSAMVQGWNKFCFTGGILEVKALLPGEAYVGGLWPAIWLMGNLARATYVGSSNWMWPWSFDKCSRDLQKQQLVSACNPHPHYGMLPNSGRGAPEIDILEAMPGSGALPLSTVGK---PYFSTSLQIAPGIEVNRPQGGVWPGPGM-WYEGMEYGANSSMNIFFYGTRN--------VKKNQDYTYQSDALSGNTQMDKKKWEQWHTYRLEWETKESDPLREGYIRWYMDDELIYGIRGETLSQHLDSEVPSEPMYLILNTAMSSTWGFPQPCP 386          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig486.12767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH94_9PHAE2.230e-25384.56GH16 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YN37_9STRA2.110e-17663.13Beta-1,6-glucan active enzyme, family GH16 n=1 Tax... [more]
A0A7S3M1V3_9STRA1.560e-14355.11Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9CTT0_9STRA3.880e-13651.30GH16 domain-containing protein n=1 Tax=Nannochloro... [more]
A0A7S1ZB15_TRICV6.220e-12748.19Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2EFL5_TRICV2.570e-12448.19Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A482SXU5_9ARCH2.240e-12252.41GH16 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S1BHS0_9STRA1.110e-12047.22Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
K0TJA7_THAOC1.350e-11945.93GH16 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S2W6G7_9STRA3.720e-11747.00Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig486contigL-elsbetiae_contig486:481..2362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score731.1
Seed ortholog evalue3.3e-208
Seed eggNOG ortholog2880.D8LC98
KEGG koko:K21850
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Beta-glucan synthesis-associated protein (SKN1)
EggNOG OGs2QVQE@2759,COG2273@1
COG Functional cat.G
CAZyGH16
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Ec32 ortholog descriptionBeta-1,6-glucan active enzyme, family GH16
Ec32 orthologEc-14_005560.1
Exons2
Model size1425
Cds size1425
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816478.2646012-CDS-L-elsbetiae_contig486:480..17891622816478.2646012-CDS-L-elsbetiae_contig486:480..1789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 481..1789 -
1691683589.0168483-CDS-L-elsbetiae_contig486:480..17891691683589.0168483-CDS-L-elsbetiae_contig486:480..1789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 481..1789 -
1622816478.2757046-CDS-L-elsbetiae_contig486:2246..23621622816478.2757046-CDS-L-elsbetiae_contig486:2246..2362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 2247..2362 -
1691683589.029224-CDS-L-elsbetiae_contig486:2246..23621691683589.029224-CDS-L-elsbetiae_contig486:2246..2362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig486 2247..2362 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig486.12767.1prot_L-elsbetiae_contig486.12767.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig486 481..2362 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig486.12767.1

>prot_L-elsbetiae_contig486.12767.1 ID=prot_L-elsbetiae_contig486.12767.1|Name=mRNA_L-elsbetiae_contig486.12767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=475bp
AVARKIRFRCRRCRGRSFCAYLCLLLSKERVAAAGGLERGSDHRTAMSSA
TRGTPAVSGGTGAVMARDLHQQRRRRPLRTAAAAAAAAASLAFLALGGVD
ASWVDPDTAEEFKTLNSLHDGSEYELIMSDEFEVNGRSFDDGHDPMWTSA
THSDDAQTSNGLGSQHFYNASYGTTTKGSLNITTTDESTIWRGYNPYKRK
YEDLSKSYRSSMLNTWNKFCFTGGIIEMNAKLPGEHDIGGLWPAFWILGN
LGRATYEASTNLIWPWSYNKCDPKLQRAQEISACNKINHFGLHGYQGRGS
TEIDVIEAQPGRSDDPLKNIGKVNSPYVSTTLQLAPGIPLHRPTNGELLS
PASTWYEGMEFGDNSTLNYNFYGMHVDKTTPQEPVYRGADQAYIADAISG
LTPLDRTHFHEYHNYKLDWVPGVGGHLKWYIDDVLVLGIDGDTVEKHGTQ
IPDEPSYVILNTAVSSSWGFPIPCP
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mRNA from alignment at L-elsbetiae_contig486:481..2362-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig486.12767.1 ID=mRNA_L-elsbetiae_contig486.12767.1|Name=mRNA_L-elsbetiae_contig486.12767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1882bp|location=Sequence derived from alignment at L-elsbetiae_contig486:481..2362- (Laminarionema elsbetiae ELsaHSoW15)
GCAGTTGCTCGTAAAATCAGATTTCGATGTCGTCGTTGTCGTGGCCGTTC GTTTTGCGCGTATCTCTGCCTCCTTCTCTCCAAAGAACGCGTTGCGGCTG CGGGGGGATTGGAAAGGTGGGTTCTTGTAGCATGTTCAAATTTGCCGACC ACAGCTGCAGCTGCTCCTCCTCCTCCTCCTCCTGCTGGTGCACGGATGGG CACGAAACCCGTGGCAGGACAAGGGGAAAATGTTGCAAGTAACAGAGACG GCAAGCAGCAGCGTCTCATGTGTGCCAACGAATGAGAAGGGCACACACAA ACACATCACAAAAAATTGACGCGGGGGGCTCAAACAATTGACGAGGGGGG GGGGGTACCCGTGAGGGGGGCCATTCGTGAACGTGCGTGCATGTGAGTAG CCGTCTGCTGACCCACTCTCAACGGCTGGATCACTGGATCCCGCTGCTAG CGTACTCTGTCACTACTAGCGCTGCCTATCTGCGCTGTGGGACGTTCGTG GCTGAAGGAGACACAGCCCACCTCCGGTTCAACTTTTGTGTGTTAGTGCG TGGCTACTTTGCCGCAACGTGAGAGGCAGCGATCACAGGACCGCCATGTC GAGCGCAACGCGCGGCACTCCTGCTGTATCCGGAGGTACGGGTGCTGTTA TGGCACGTGACCTCCACCAGCAACGGAGGAGGCGACCCTTACGGACGGCT GCTGCTGCCGCTGCTGCTGCTGCCTCTTTAGCTTTTTTGGCGCTTGGCGG CGTGGACGCGAGCTGGGTCGACCCGGACACGGCGGAGGAGTTCAAGACGC TCAATTCGCTACACGACGGCTCGGAGTACGAACTGATCATGTCCGATGAG TTCGAGGTCAACGGGCGGTCGTTCGACGACGGCCACGATCCCATGTGGAC ATCGGCCACCCACTCGGATGACGCCCAGACCTCGAACGGGCTGGGTTCGC AGCACTTCTACAACGCGTCCTACGGCACCACGACGAAGGGGAGCCTGAAC ATCACCACCACCGACGAGTCCACCATCTGGCGAGGGTACAACCCGTACAA GCGCAAGTACGAGGACCTCTCCAAGAGCTACCGCAGCTCCATGCTCAACA CCTGGAACAAGTTCTGCTTCACCGGCGGCATCATCGAGATGAACGCCAAG CTCCCAGGGGAGCACGATATCGGCGGCCTCTGGCCGGCCTTCTGGATTCT GGGAAACCTCGGCCGCGCGACATATGAGGCCTCCACCAATCTCATCTGGC CCTGGAGCTACAACAAGTGCGACCCCAAGCTGCAGCGAGCGCAGGAGATC AGCGCGTGCAACAAGATCAACCACTTCGGGTTGCACGGGTACCAGGGCCG CGGATCTACGGAGATCGACGTCATCGAGGCCCAGCCGGGGAGGTCCGACG ACCCGCTCAAGAACATTGGCAAGGTGAACAGCCCGTACGTGTCGACGACG CTCCAGCTTGCCCCGGGTATCCCCCTGCACCGCCCCACCAACGGGGAGCT GCTCTCTCCCGCCAGCACCTGGTACGAGGGCATGGAGTTCGGGGACAACT CTACCCTCAACTACAACTTCTACGGCATGCACGTGGACAAGACAACGCCG CAGGAGCCGGTGTACCGAGGGGCAGACCAGGCGTACATCGCCGATGCGAT CTCGGGGCTCACGCCTCTGGACCGCACCCACTTCCATGAGTACCACAACT ACAAGCTCGATTGGGTTCCCGGGGTAGGCGGACACCTAAAGTGGTACATT GACGACGTTTTGGTGCTCGGCATCGACGGCGACACCGTCGAAAAGCACGG CACGCAGATCCCGGACGAGCCTTCGTACGTCATCCTCAACACTGCAGTTT CCAGCTCTTGGGGTTTCCCGATCCCGTGCCCT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig486:481..2362-

>mRNA_L-elsbetiae_contig486.12767.1 ID=mRNA_L-elsbetiae_contig486.12767.1|Name=mRNA_L-elsbetiae_contig486.12767.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2850bp|location=Sequence derived from alignment at L-elsbetiae_contig486:481..2362- (Laminarionema elsbetiae ELsaHSoW15)
GCAGTTGCTCGTAAAATCAGATTTCGATGTCGTCGTTGTCGTGGCCGTTC
GTTTTGCGCGTATCTCTGCCTCCTTCTCTCCAAAGAACGCGTTGCGGCTG
CGGGGGGATTGGAAAGGCAGTTGCTCGTAAAATCAGATTTCGATGTCGTC
GTTGTCGTGGCCGTTCGTTTTGCGCGTATCTCTGCCTCCTTCTCTCCAAA
GAACGCGTTGCGGCTGCGGGGGGATTGGAAAGAGGCAGCGATCACAGGAC
CGCCATGTCGAGCGCAACGCGCGGCACTCCTGCTGTATCCGGAGGTACGG
GTGCTGTTATGGCACGTGACCTCCACCAGCAACGGAGGAGGCGACCCTTA
CGGACGGCTGCTGCTGCCGCTGCTGCTGCTGCCTCTTTAGCTTTTTTGGC
GCTTGGCGGCGTGGACGCGAGCTGGGTCGACCCGGACACGGCGGAGGAGT
TCAAGACGCTCAATTCGCTACACGACGGCTCGGAGTACGAACTGATCATG
TCCGATGAGTTCGAGGTCAACGGGCGGTCGTTCGACGACGGCCACGATCC
CATGTGGACATCGGCCACCCACTCGGATGACGCCCAGACCTCGAACGGGC
TGGGTTCGCAGCACTTCTACAACGCGTCCTACGGCACCACGACGAAGGGG
AGCCTGAACATCACCACCACCGACGAGTCCACCATCTGGCGAGGGTACAA
CCCGTACAAGCGCAAGTACGAGGACCTCTCCAAGAGCTACCGCAGCTCCA
TGCTCAACACCTGGAACAAGTTCTGCTTCACCGGCGGCATCATCGAGATG
AACGCCAAGCTCCCAGGGGAGCACGATATCGGCGGCCTCTGGCCGGCCTT
CTGGATTCTGGGAAACCTCGGCCGCGCGACATATGAGGCCTCCACCAATC
TCATCTGGCCCTGGAGCTACAACAAGTGCGACCCCAAGCTGCAGCGAGCG
CAGGAGATCAGCGCGTGCAACAAGATCAACCACTTCGGGTTGCACGGGTA
CCAGGGCCGCGGATCTACGGAGATCGACGTCATCGAGGCCCAGCCGGGGA
GGTCCGACGACCCGCTCAAGAACATTGGCAAGGTGAACAGCCCGTACGTG
TCGACGACGCTCCAGCTTGCCCCGGGTATCCCCCTGCACCGCCCCACCAA
CGGGGAGCTGCTCTCTCCCGCCAGCACCTGGTACGAGGGCATGGAGTTCG
GGGACAACTCTACCCTCAACTACAACTTCTACGGCATGCACGTGGACAAG
ACAACGCCGCAGGAGCCGGTGTACCGAGGGGCAGACCAGGCGTACATCGC
CGATGCGATCTCGGGGCTCACGCCTCTGGACCGCACCCACTTCCATGAGT
ACCACAACTACAAGCTCGATTGGGTTCCCGGGGTAGGCGGACACCTAAAG
TGGTACATTGACGACGTTTTGGTGCTCGGCATCGACGGCGACACCGTCGA
AAAGCACGGCACGCAGATCCCGGACGAGCCTTCGTACGTCATCCTCAACA
CTGCAGTTTCCAGCTCTTGGGGTTTCCCGATCCCGTGCCCTAGGCAGCGA
TCACAGGACCGCCATGTCGAGCGCAACGCGCGGCACTCCTGCTGTATCCG
GAGGTACGGGTGCTGTTATGGCACGTGACCTCCACCAGCAACGGAGGAGG
CGACCCTTACGGACGGCTGCTGCTGCCGCTGCTGCTGCTGCCTCTTTAGC
TTTTTTGGCGCTTGGCGGCGTGGACGCGAGCTGGGTCGACCCGGACACGG
CGGAGGAGTTCAAGACGCTCAATTCGCTACACGACGGCTCGGAGTACGAA
CTGATCATGTCCGATGAGTTCGAGGTCAACGGGCGGTCGTTCGACGACGG
CCACGATCCCATGTGGACATCGGCCACCCACTCGGATGACGCCCAGACCT
CGAACGGGCTGGGTTCGCAGCACTTCTACAACGCGTCCTACGGCACCACG
ACGAAGGGGAGCCTGAACATCACCACCACCGACGAGTCCACCATCTGGCG
AGGGTACAACCCGTACAAGCGCAAGTACGAGGACCTCTCCAAGAGCTACC
GCAGCTCCATGCTCAACACCTGGAACAAGTTCTGCTTCACCGGCGGCATC
ATCGAGATGAACGCCAAGCTCCCAGGGGAGCACGATATCGGCGGCCTCTG
GCCGGCCTTCTGGATTCTGGGAAACCTCGGCCGCGCGACATATGAGGCCT
CCACCAATCTCATCTGGCCCTGGAGCTACAACAAGTGCGACCCCAAGCTG
CAGCGAGCGCAGGAGATCAGCGCGTGCAACAAGATCAACCACTTCGGGTT
GCACGGGTACCAGGGCCGCGGATCTACGGAGATCGACGTCATCGAGGCCC
AGCCGGGGAGGTCCGACGACCCGCTCAAGAACATTGGCAAGGTGAACAGC
CCGTACGTGTCGACGACGCTCCAGCTTGCCCCGGGTATCCCCCTGCACCG
CCCCACCAACGGGGAGCTGCTCTCTCCCGCCAGCACCTGGTACGAGGGCA
TGGAGTTCGGGGACAACTCTACCCTCAACTACAACTTCTACGGCATGCAC
GTGGACAAGACAACGCCGCAGGAGCCGGTGTACCGAGGGGCAGACCAGGC
GTACATCGCCGATGCGATCTCGGGGCTCACGCCTCTGGACCGCACCCACT
TCCATGAGTACCACAACTACAAGCTCGATTGGGTTCCCGGGGTAGGCGGA
CACCTAAAGTGGTACATTGACGACGTTTTGGTGCTCGGCATCGACGGCGA
CACCGTCGAAAAGCACGGCACGCAGATCCCGGACGAGCCTTCGTACGTCA
TCCTCAACACTGCAGTTTCCAGCTCTTGGGGTTTCCCGATCCCGTGCCCT
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