mRNA_L-elsbetiae_contig4855.12761.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5KDQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ3_9PHAE) HSP 1 Score: 162 bits (409), Expect = 2.830e-42 Identity = 106/221 (47.96%), Postives = 145/221 (65.61%), Query Frame = 3 Query: 3 KCERVMYAGADPHTIKHSWAPHERGLKLVSTLVDTK-VGKKGKSITGYPDANEVALSKMAREKADELMEGKRKAAQRRG--QXXXXXXXXADSTISCPVIAAILASQSSGSRTRTSFSGTSSAKPSADPEPPNQSDWRDTAAPVIEAMKSMTAENMLAYLSEQGVEAAAELQQQQ---REARELQAASRAALKDAGMFARTNEGRRTWQTILTAAAYDVDE 647 +C R+MYAG + + H W+PHERG+KL +TL+D+K G+K TGY +A+EV LS +AREKAD +M GKR AA++ G Q AD +SCPVIAAI S G RTR+S + +A +PEP Q DWRD++ + AM+SM +L +L+ QGV AA L+++Q R+AR++ A ++ AL A RTNEGRRT+QTILTAAA+D D+ Sbjct: 14 ECTRIMYAGQTRYEVIHKWSPHERGIKLRTTLLDSKRKGRKAAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHE-GLRTRSSATTNPAAN---NPEP--QPDWRDSSESFLAAMRSMAEGELLDFLAGQGVAAADLLRKEQADARDARKMVAGTKKALAAASTQGRTNEGRRTFQTILTAAAFDGDD 228
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5JJC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC8_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.070e-30 Identity = 84/220 (38.18%), Postives = 122/220 (55.45%), Query Frame = 3 Query: 6 CERVMYAGADPHTIKHSWAPHERGLKLVSTLVDTKVGKKGK-SITGYPDANEVALSKMAREKADELMEGKRKAAQRRGQXXXXXXXX------ADSTISCPVIAAILASQSSGSRTRTSFSGTSSAKPSADPEPPNQSDWRDTAAPVIEAMKSMTAENMLAYLSEQGVEAAAELQQQQREARELQAASRAALKDAGMFARTNEGRRTWQTILTAAAYDVD 644 C R++ G + H W PH+ GLKL + L+D + + + YP +E AL AREKA+E+++ +R ++ Q ADS + CPV AA+ +TR + ++ + EPP Q +W DT+ + AM++MT +L L+E V AA +L++Q EARELQ+A R ALKDA + RT EGRRT+QT+LTA AYD D Sbjct: 15 CIRIVPLGDKQWKVTHQWVPHDLGLKLTTKLMDQRKDTRVVVQLVAYPKDDEDALCSKAREKAEEILKTRRDRYEKTLQPSSGVRRCGNTGRRADSEMGCPVRAAL------PRKTRAGVTRPTTPDRPPEEEPPEQFEWSDTSPAFVAAMRAMTTTELLRCLAELKVPAADKLREQLEEARELQSACRRALKDAAIQGRTKEGRRTFQTLLTAVAYDGD 228
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5JIF1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF1_9PHAE) HSP 1 Score: 101 bits (251), Expect = 9.600e-24 Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 3 KCERVMYAGADPHTIKHSWAPHERGLKLVSTLVDTK-VGKKGKSITGYPDANEVALSKMAREKADELMEGKRKAAQRRG--QXXXXXXXXADSTISCPVIAAILASQSSGSRTRTS 341 +C R+MYAG + + H W+PHERG+KL +TL+D+K G+K TGY +A+EV LS +AREKAD +M GKR AA++ G Q AD +SCPVIAAI S G RTR+S Sbjct: 14 ECTRIMYAGQTRYEVIHKWSPHERGIKLRTTLLDSKRKGRKAAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHE-GLRTRSS 128
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5JIB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB0_9PHAE) HSP 1 Score: 101 bits (251), Expect = 6.910e-22 Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 3 Query: 3 KCERVMYAGADPHTIKHSWAPHERGLKLVSTLVDTK-VGKKGKSITGYPDANEVALSKMAREKADELMEGKRKAAQRRG--QXXXXXXXXADSTISCPVIAAILASQSSGSRTRTS 341 +C R+MYAG + + H W+PHERG+KL +TL+D+K G+K TGY +A+EV LS +AREKAD +M GKR AA++ G Q AD +SCPVIAAI S G RTR+S Sbjct: 14 ECTRIMYAGQTRYEVIHKWSPHERGIKLRTTLLDSKRKGRKAAENTGYCEASEVVLSNLAREKADAIMAGKRNAARKNGIPQGGGSGGCGADRVMSCPVIAAIQGSHE-GLRTRSS 128
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5JIV9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIV9_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 5.880e-14 Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 435 MKSMTAENMLAYLSEQGVEAAAELQQQQ---REARELQAASRAALKDAGMFARTNEGRRTWQTILTAAAYDVDE 647 MKSMT+E +LA LS++G+ AA ELQ+ Q +AR+ QAASR ALKDA +F RTN+GR+T+QTILTA AYD DE Sbjct: 1 MKSMTSEALLACLSQEGIPAAQELQELQLQLEDARQFQAASREALKDAAVFGRTNQGRQTYQTILTACAYDGDE 74
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5JIQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ3_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.850e-13 Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 3 Query: 381 EPPNQSDWRDTAAPVIEAMKSMTAENMLAYLSEQGVEAAAELQQQQREARELQAASRAALKDAGMFARTNEGRRTWQTILTAAAYD 638 EPP Q +W DT+ + AM++MT +L L+E V AA +L++Q EAR+LQ+A R ALKDA + R EGRR +QT+LTA AYD Sbjct: 30 EPPEQFEWSDTSPAFVAAMRAMTTTELLRCLAELKVPAADKLREQLEEARKLQSACRRALKDAAIQGRAKEGRRAFQTLLTAVAYD 115
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5KIV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIV8_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.190e-12 Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 3 Query: 435 MKSMTAENMLAYLSEQGVEAAAELQQQQREARELQAASRAALKDAGMFARTNEGRRTWQTILTAAAYDVDE 647 MK+M AE +L L + GV AA E+ Q+ +AR+ QAASRAALKDA +F RTN GR+T+QTILTA AYD DE Sbjct: 1 MKAMNAETLLQSLIDNGVPAAQEIHQELADARQFQAASRAALKDAAVFGRTNMGRQTYQTILTAHAYDGDE 71
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5JI78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI78_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.270e-12 Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 3 Query: 435 MKSMTAENMLAYLSEQGVEAAAELQQQQREARELQAASRAALKDAGMFARTNEGRRTWQTILTAAAYDVDE 647 MK+M AE +L L + GV AA E+ Q+ +AR+ QAASRAALKDA +F RTN GR+T+QTILTA AYD DE Sbjct: 1 MKAMNAETLLQSLIDNGVPAAQEIHQELADARQFQAASRAALKDAAVFGRTNMGRQTYQTILTAHAYDGDE 71
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5K847_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K847_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 3.410e-12 Identity = 79/225 (35.11%), Postives = 117/225 (52.00%), Query Frame = 3 Query: 6 CERVMYAGADPHTIKHSWA-PHERGLKLVSTLVDTK-VGKKGKSITGYPDANEVALSKMAREKADELMEGKRKAAQRR------GQXXXXXXXXADSTISCPVIAAILASQSSGSRTRTSFSGTSSAKPSADPEPPNQSDWRDTAAPV-IEAMKSMTAENMLAYLSEQGVEAAAELQQQQR--EARELQAAS-RAALKDAGMFARTNEGRRTWQTILTAAAYDVD 644 CER + G D H +K SW ERG+ + +TLVD+K + ++ +GY +E A+S+ A E D++++ KR+ Q+ XXXX DS ++ PVI A+ RTR +P+A DWR +A + +M SM +N L +L + G A + +++ R E + A S A++ A RTNEGRRT QTILTAAA+ VD Sbjct: 180 CERTVLLGKDKHVVKLSWRLVSERGVLVTATLVDSKHKNRSSQTYSGYAKDSEEAVSEKAEELTDKVLKNKRERWQKAQXXXXXXXXXXXVRRTEDSAVADPVIMALRGV----GRTRPRVVTIQPTEPTA------PVDWRQQSAETFLASMDSMGYDNALQHLEKIGSTFAKDTRKRLRGLEDKVSTAVSLERAIEQAQKQRRTNEGRRTLQTILTAAAFPVD 394
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Match: A0A6H5KYP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP1_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 2.510e-11 Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 3 Query: 3 KCERVMYAGADPHTIKHSWAPHE-RGLKLVSTLVDTKVGKKGKSI-TGYPDANEVALSKMAREKADELMEGKRKAAQRRG-QXXXXXXXXADSTISCPVI---AAILASQSSGSRTRTSFSG 350 +CERVMYAG + SW E RG+++ + L D K GK+ + +G +A E LSK+AREKAD++M+GKR+ A+R G ADS +SCPVI A L+ SG RT ++ G Sbjct: 14 ECERVMYAGERQFKVVQSWRLKEGRGVEITTKLFDLKAGKRAAARNSGTSEACEADLSKVAREKADKIMKGKREGARRAGVPQARGRGGGADSHMSCPVIRVAARQLSPNFSGGRTTSTSRG 135 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4855.12761.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4855.12761.1 >prot_L-elsbetiae_contig4855.12761.1 ID=prot_L-elsbetiae_contig4855.12761.1|Name=mRNA_L-elsbetiae_contig4855.12761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=210bp MYAGADPHTIKHSWAPHERGLKLVSTLVDTKVGKKGKSITGYPDANEVALback to top mRNA from alignment at L-elsbetiae_contig4855:436..1542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4855.12761.1 ID=mRNA_L-elsbetiae_contig4855.12761.1|Name=mRNA_L-elsbetiae_contig4855.12761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1107bp|location=Sequence derived from alignment at L-elsbetiae_contig4855:436..1542+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4855:436..1542+ >mRNA_L-elsbetiae_contig4855.12761.1 ID=mRNA_L-elsbetiae_contig4855.12761.1|Name=mRNA_L-elsbetiae_contig4855.12761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1260bp|location=Sequence derived from alignment at L-elsbetiae_contig4855:436..1542+ (Laminarionema elsbetiae ELsaHSoW15)back to top |