mRNA_L-elsbetiae_contig4853.12759.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: A0A6H5JW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW91_9PHAE) HSP 1 Score: 212 bits (539), Expect = 1.570e-62 Identity = 109/160 (68.12%), Postives = 128/160 (80.00%), Query Frame = 2 Query: 2 TDMHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSALDEAAWGGHERLVTEL 481 T HIYPKR LEGLE+EIFKLVSYSATPEQWKEWL+VPLE AAA G+ DLF +LL AGA GSAGWRGCRDR+L+DAAAVGGN +V SG L GA+PDV+VVS SSK SAL T V GHE VARRL+ AGAD++F DP+R+ A +A G+E+LV ++ Sbjct: 42 TKTHIYPKRVLLEGLEIEIFKLVSYSATPEQWKEWLQVPLERAAALGNRDLFYKLLEAGAYGSAGWRGCRDRSLIDAAAVGGNVDVVSGFLEAGAEPDVQVVSWSSKTSALCTPVRFGHEDVARRLVTAGADVNFVDPMRKSPAFAQATRAGYEQLVGDI 201
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: D8LS36_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS36_ECTSI) HSP 1 Score: 206 bits (524), Expect = 5.670e-57 Identity = 103/143 (72.03%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSAL 436 MH+YP+R L+G+E EI+KLVSYSATP+QWKEWLR+PLEHAAARG+L+L + LLGAGADGSAGWRGCR RTL+DAAA+GG+E V S LL GAQ DV VVS SSKRSALYTA M GHE ARRL+ AGAD+DF+DPV L Sbjct: 1 MHVYPERRLLQGMESEIWKLVSYSATPQQWKEWLRMPLEHAAARGNLNLVSSLLGAGADGSAGWRGCRGRTLIDAAALGGSEPVVSTLLRAGAQWDVNVVSVSSKRSALYTATMCGHEDAARRLVAAGADVDFEDPVHGNPVL 143
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: D8LRZ8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRZ8_ECTSI) HSP 1 Score: 196 bits (498), Expect = 1.920e-53 Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDP 415 MH+YP+R +G+ EI+KLVS+SATP+QWKEWLRVPLEHAAARG+L+L N LL AGADGSAGW+GCR RTL+DAAA+GG+E V S LL GAQPDV VVS SSKRS+LYTA + GH+ ARRLI AGAD++F+DP Sbjct: 1 MHVYPERRLFQGMGSEIWKLVSHSATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWKGCRGRTLIDAAALGGSEPVVSALLRAGAQPDVNVVSVSSKRSSLYTATVCGHKDAARRLITAGADVNFEDP 136
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: A0A6H5KNQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ1_9PHAE) HSP 1 Score: 190 bits (483), Expect = 8.190e-53 Identity = 96/158 (60.76%), Postives = 120/158 (75.95%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSALDEAAWGGHERLVTEL 481 MHI+P+R SL+GL E+FKLVSY A+ EQW EWLRVPLEHAA+RG+ +L LL AGAD AGWRGCR RTLLDAAA+GGN +V S L+ GA DV V+ SS+RSAL+TA GHEA A+RL++ GAD++F+DPV + S L +A G H +LV +L Sbjct: 1 MHIFPERTSLDGLGSEVFKLVSYGASREQWAEWLRVPLEHAASRGNPNLVERLLQAGADAGAGWRGCRGRTLLDAAALGGNADVMSALIRGGAGADVNKVTVSSRRSALHTATCCGHEAAAKRLVLTGADVNFRDPVAKCSVLSQAIQGSHTQLVNDL 158
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: D8LRS0_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 185 bits (470), Expect = 2.040e-49 Identity = 103/174 (59.20%), Postives = 121/174 (69.54%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVAR-------RLIVAGADMDFQDPVRQRSALDEAAWGGHERLVTELK*VGPTLTV 508 M++YPKR L+G+E EI+KLVSY ATP+QWKEWLRVPLEHAAARG+L+L N LL AGADGSAGWRGC DRTL+DAAA+GG+E V S LL GAQPDV VS SSKRSALYTA + GHE AR L++ GA D QD + L A GH +V L G + + Sbjct: 1 MYVYPKRRLLQGMESEIWKLVSYGATPQQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGCLDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSISSKRSALYTATVCGHEHAARGLDRIVSALLLRGAYTDAQD-TSGATPLIYACGSGHLSVVNTLLAAGADVDI 173
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.220e-47 Identity = 95/155 (61.29%), Postives = 114/155 (73.55%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSALDEAAWGGHERLV 472 MH+YPKRA LEG E+EIFKL+ + ATPEQW EWLR PLEHAAARG+L L LL AGA+G AGWRGCR RT+LDAAA+GGN +V + LL G DV VVS SS+RSAL+ A + GHEA A++LI+AGAD++ DP +L A G H LV Sbjct: 1 MHLYPKRALLEGAELEIFKLLYFGATPEQWAEWLRAPLEHAAARGNLGLVERLLNAGANGGAGWRGCRGRTMLDAAALGGNPDVVATLLASGCASDVNVVSLSSRRSALHVASVCGHEAAAKKLIIAGADVNRVDPGDACVSLHVAVEGRHGDLV 155
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: A0A6H5JY41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY41_9PHAE) HSP 1 Score: 180 bits (456), Expect = 6.190e-47 Identity = 95/155 (61.29%), Postives = 112/155 (72.26%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSALDEAAWGGHERLV 472 MH+ PKRA LE E+EIFKL+S+ ATPE+W EWLR P EHAAARG++ L LL AGADG AGWRGCR RT+LDAAA+GGN +V + LL PDV VVS SSKRSAL+ AV HEA AR L++AGAD DPV + + AA GGH+ LV Sbjct: 1 MHLDPKRALLEEAELEIFKLLSFGATPERWAEWLRAPQEHAAARGNIGLVERLLEAGADGGAGWRGCRSRTMLDAAALGGNADVVTKLLRSECVPDVNVVSVSSKRSALHLAVTWSHEAAARTLMIAGADNHRVDPVNRYTPFHVAAEGGHDDLV 155
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: D8LNI8_ECTSI (EsV-1-8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI8_ECTSI) HSP 1 Score: 168 bits (426), Expect = 1.470e-45 Identity = 97/165 (58.79%), Postives = 111/165 (67.27%), Query Frame = 1 Query: 1042 HQACWGRIEGLEAAVDLLLRWGADETALDNYGRSPAALLDENEGVVYIDNLATQDEAEHTRLLLARAPADRAWRRRGWLVMLRSRYSKATVRRCTSD---NHGTGGEGGGSEVARSECIVCVEHDGPRNTGNGMGGELETEGGGVVQVGAAGQLGLKTDGAMRTA 1527 H+ CW R EGLEAAVD+LLRWGADET L+ G SPA L G V N A QDE + TRLLL+RAPADRAWRRRGWLVMLRSR SKA +C S +HG GGE GGSE+ARSE + ++ P T NG GGE+E GG VQ AAG LGL+ + TA Sbjct: 23 HETCWERHEGLEAAVDMLLRWGADETTLNYGGASPADFLGGRYGKVIGHNPAPQDEIDRTRLLLSRAPADRAWRRRGWLVMLRSRDSKAQEGKCRSSGGYDHGDGGEVGGSEMARSEGMAGADYGRPGTTRNGAGGEVEAGGGEEVQDIAAGLLGLRRKSVVHTA 187
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: D8LE08_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE08_ECTSI) HSP 1 Score: 173 bits (438), Expect = 6.570e-45 Identity = 94/158 (59.49%), Postives = 107/158 (67.72%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSALDEAAWGGHERLVTEL 481 MH+YPKRA LEG EVEIFKL+S+ ATPEQW +WLR PLEHAAARG++ L LL AGADG AGWRGCR RT+LDAA G PDV VVS SSKRSAL+ AV+ GHEA AR L++AGA++ DP Q AA GGH LV L Sbjct: 1 MHLYPKRALLEGAEVEIFKLLSFCATPEQWADWLRAPLEHAAARGNIGLVERLLEAGADGRAGWRGCRGRTMLDAAXXXXXXXXXXXXXXSGCAPDVNVVSVSSKRSALHLAVVCGHEAAARTLMIAGANIRRVDPGDQCVPFHVAAEGGHGDLVGNL 158
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Match: A0A6H5JRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY1_9PHAE) HSP 1 Score: 170 bits (431), Expect = 4.990e-44 Identity = 97/178 (54.49%), Postives = 113/178 (63.48%), Query Frame = 2 Query: 8 MHIYPKRASLEGLEVEIFKLVSYSATPEQWKEWLRVPLEHAAARGSLDLFNELLGAGADGSAGWRGCRDRTLLDAAAVGGNEEVASGLLGVGAQPDVKVVSCSSKRSALYTAVMLGHEAVARRLIVAGADMDFQDPVRQRSALDEAAWGGHERLVT------ELK*VGPTLTVGKAVT 523 M +YP+R L+G+E EI+KLVSYSATP+QWKEWLRVPL+HAAARG+L+L N LL AGADGSAGW+G AQPDV V+S SSKRSALYTA + GHE ARRLI AGAD++F DPV L EA GGH +L+T L V LT G VT Sbjct: 1 MRVYPERVLLQGMESEIWKLVSYSATPQQWKEWLRVPLKHAAARGNLNLVNSLLEAGADGSAGWKG--------------------------AQPDVNVLSVSSKRSALYTATVCGHEDAARRLITAGADVNFDDPVHCSHVLYEAILGGHTQLLTLSCESGHLSVVNTLLTAGANVT 152 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4853.12759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4853.12759.1 >prot_L-elsbetiae_contig4853.12759.1 ID=prot_L-elsbetiae_contig4853.12759.1|Name=mRNA_L-elsbetiae_contig4853.12759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MLASGEGRLSVVKTLLAAGADVNIRENVVGYSAIDKSAMGGHSGVIEAIVback to top mRNA from alignment at L-elsbetiae_contig4853:4837..6363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4853.12759.1 ID=mRNA_L-elsbetiae_contig4853.12759.1|Name=mRNA_L-elsbetiae_contig4853.12759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1527bp|location=Sequence derived from alignment at L-elsbetiae_contig4853:4837..6363+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4853:4837..6363+ >mRNA_L-elsbetiae_contig4853.12759.1 ID=mRNA_L-elsbetiae_contig4853.12759.1|Name=mRNA_L-elsbetiae_contig4853.12759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig4853:4837..6363+ (Laminarionema elsbetiae ELsaHSoW15)back to top |