mRNA_L-elsbetiae_contig4848.12755.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: D7G3M9_ECTSI (NUC153 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M9_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 5.500e-146 Identity = 266/372 (71.51%), Postives = 280/372 (75.27%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQKTEDEAESEDEAIEDRFTAVKPGKAGKGATATRRRPLPGSDSDPATSXXXXXXXXXXXXXXPG---SNSDGPVAVRGGSGGKRKGKDTAP-KKRGREGRAAAGG---RAAPGFYELNDEEDAATAAVGLGSARDKLAQAQRR 1098 VA+ RGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKL+TRLKAVSEPFAYEEYRKKKVK+KMEEKTKSRISIR NLPKVNRAMAERLLDKA SGDKK + E VSSSNPLGDDRFGAMFESA FEVDPESEEYARAHPTS++ANKMRQKTEDEAESED+AIEDRFT V G KG + PL G DS+ +S G S+SDG R G RK D P KKRGR+G+ GG RA PGFYELNDEEDAATAAVGLG +RDK AQAQRR Sbjct: 343 VAHDARGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLYTRLKAVSEPFAYEEYRKKKVKEKMEEKTKSRISIRTNLPKVNRAMAERLLDKAESGDKKKRKAKL------------EGEXXXXXXXXXXXVSSSNPLGDDRFGAMFESAEFEVDPESEEYARAHPTSVIANKMRQKTEDEAESEDDAIEDRFTKV--GGINKGTSGRDGSPLAGRDSEAGSSSSDGGFSEEEGERGDGAAGSDSDGSATGRAGK--VRKKDDVVPRKKRGRDGKTTKGGKQSRAKPGFYELNDEEDAATAAVGLGGSRDKQAQAQRR 698
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A835Z278_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z278_9STRA) HSP 1 Score: 253 bits (647), Expect = 6.210e-73 Identity = 186/418 (44.50%), Postives = 247/418 (59.09%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKM------RQKTEDEAES--EDEAI-EDRFTAVKPGKAGKGATATRRRPLPGSDSDPATSXXXXXXXXXXXXXXPGSNSDGPVAVRGGSGGKRKGKDTAPKKRGREGRAAAGGRAAPGFYELNDEEDAATAAVGLGSARDKLAQAQRRRERAIPLKERISEAARSEGAIVDDRVIRTNAGVVREFSYAPAAG 1230 VA+ RGDSGLL++A EQ+RV++YY+P LGPAPRWCSFLD LTEELEE A+VY+DYKFVT EVE LG+++LVGTPLLRGYMHG+FM +L RL+AVSEPFAYE YR+ K+++++EEK KSRI++R LP VNR +AE+LL K G A + + V++SNPLGDDRF MF+S FEVD S E+ R HP+ R+ D+ +S ED A+ DRFT V XXXXXXXXXXXXXX + P A G+ K TAP RA P F+ELN+ ED +A + LG RD+ +R ++R++PL++R+ E + E + D+V++T+AG+VREF++ P +G Sbjct: 346 VAHDARGDSGLLMLAGEQARVMAYYIPTLGPAPRWCSFLDSLTEELEEGDAATVYDDYKFVTRDEVEALGIASLVGTPLLRGYMHGFFMAAQLHNRLRAVSEPFAYEAYRRAKLRERVEEKRKSRIALRRALPAVNRPLAEKLLAKRGGA---------------------------AAAADADAVAASNPLGDDRFAQMFQSRDFEVDDTSAEFLRHHPSGAPGGGRGRRGGARESDSDDLDSGAEDAALLGDRFTRVGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAT-PKAKAAGA----KRPKTAPAT-----------RAKPKFFELNEGEDT-SAVLALGGERDRAQARERAQQRSLPLEDRLREMTQEERRVGRDKVVKTSAGLVREFTFTPKSG 719
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A7S3UWA4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA4_HETAK) HSP 1 Score: 225 bits (574), Expect = 3.050e-64 Identity = 128/256 (50.00%), Postives = 172/256 (67.19%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQ------EASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQKTEDEAESEDEAIEDRFTAV 753 VA +RGDSGLL++A EQ RV++YYVPALGPAPRWCSFLD +TEELEEE SVYEDYKFVT E EELG +NL+GTPL++GYMHG+FMDMKL+++LKAVSEP AYEE+RKKK+++++E K ++RI+++ LPKVN+ A+R++ K +A ++G + K + N LGDDRF MF S F++D E+EE+ +P+ M+ + +DE ESEDEA+ RF V Sbjct: 104 VAKDQRGDSGLLMLAGEQPRVMTYYVPALGPAPRWCSFLDSVTEELEEEAGPGXXXXXSVYEDYKFVTRREAEELGAANLIGTPLMKGYMHGFFMDMKLYSKLKAVSEPQAYEEWRKKKLRERVEAKRENRIALQKRLPKVNQEYAQRVMAKEAK----------------------DAAKKGT----APKKDAQNVLGDDRFSKMFTSEDFQIDEENEEFKLRNPS----GPMKARADDEEESEDEALGGRFRRV 329
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: H3GLA6_PHYRM (NUC153 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLA6_PHYRM) HSP 1 Score: 221 bits (562), Expect = 5.420e-61 Identity = 119/234 (50.85%), Postives = 156/234 (66.67%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQKTED 705 V +G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVGTPLL+ YMHG+FMD +L+ ++KAV+EPFAY+E+RKKK+K+K+E K +RI+I+ LPKVNRA AER+L+ K K E G S SNPLGDDRF MF S F+VD ES+ Y HP ++ A + R++ ED Sbjct: 324 VVEGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDEWRKKKLKEKVEAKQSNRITIQRRLPKVNRATAERMLENEAKRKKNSK--------------------EADGEDDDADKSFSNPLGDDRFSRMFTSTDFQVDEESDTYRMLHPNAVNAKQQRKQQED 537
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A484EDZ8_BRELC (NUC153 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDZ8_BRELC) HSP 1 Score: 216 bits (550), Expect = 2.800e-59 Identity = 154/420 (36.67%), Postives = 218/420 (51.90%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQKTED-------EAESEDEAIEDRFTAVKPGKAGKGATATRRRPLPGSDSDPATSXXXXXXXXXXXXXXPGSNSDGPVAVRGGSGGKRKGKDTAPKKRGREGRAAAGGRAAPGFYELNDEEDAATAAVGLGSARDKLAQAQRRRERAIPLK-----ERISEAARSEGAIVDDRVIRTNAGVVREFSYAPAA 1227 V +G SG+LL+A EQ R++SYY+P LG AP+WCSFLD LTEELEEE +++VY+DY+FVT A++ G+ +LVGTPLL+ YMHG+FM+ +L+ ++KAV+EPFAYEE+RKKK+++K+E K +RI+I LPK+NRA AER+L K G G + + SNPL D+RF MF S+ FEVD ESE Y HP++ + ++ ED + E+ D+ + DRF V L GS SD + G P A R T+PK++ R P FYE+ + E + GS+ D+ AQ +R+ +PL +RI E+ RS + T+ G +RE S+ P A Sbjct: 324 VVEGSQGKSGVLLVAGEQERIMSYYIPELGIAPKWCSFLDSLTEELEEEAQSTVYDDYRFVTRADIASFGLDHLVGTPLLKAYMHGFFMNARLYNKVKAVAEPFAYEEWRKKKIQEKIESKQANRITIPRRLPKINRATAERILQNESKRKK---------------------GNTQVGDETNSDQNFSNPLRDERFSRMFTSSDFEVDEESEAYRMLHPSAANTRQKLKQQEDMDSDAGTDDEAADDEVSDRFARVIDDDE-------EENTLEGSPSDEFSDE--------------GQEVQQPAAKR-----------TSPKEK---------RRPPPKFYEIANGEKVGDL-MSFGSSSDRAAQRERKELARLPLAKRLKIQRIHESERS----AFKKAETTDGGYIREMSFVPQA 676
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: G4YXE2_PHYSP (NUC153 domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4YXE2_PHYSP) HSP 1 Score: 214 bits (545), Expect = 1.480e-58 Identity = 120/229 (52.40%), Postives = 155/229 (67.69%), Query Frame = 1 Query: 19 RGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQKTED 705 +G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVGTPLL+ YMHG+FMD +L+ ++KAV+EPFAY+E+RKKK+K+K+E K +RI+I+ LPKVNRA AER+L K K GEE S S SNPLGD+RF MF S+ FEVD ES+ Y HP + K ++K ED Sbjct: 330 QGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDEWRKKKLKEKVEAKQANRITIQRRLPKVNRATAERILQNEAKRKKNGKGAD---------------GEEADADS-----SFSNPLGDERFSRMFTSSDFEVDEESDTYRMLHPNAA-NTKQQRKQED 537
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A6P8ITT1_ACTTE (nucleolar protein 10-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ITT1_ACTTE) HSP 1 Score: 213 bits (542), Expect = 2.060e-58 Identity = 113/224 (50.45%), Postives = 158/224 (70.54%), Query Frame = 1 Query: 25 DSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQK 696 DSGLL MATE ++L YY+P+LGPAPRWCSFLD LTEELEE+Q+ +VY+DYKFVT ++E+LG+++L+GT LLR YMHGYFMD++L+ + K ++EPFA+EEYRKKK+++K++E+ ++R+ I+ LP++NRA+AE+LL++ DKK DE G + SNPLGDDRF AMF++ F+VD ESEE+ HP +K + K Sbjct: 322 DSGLLFMATEAPKMLVYYIPSLGPAPRWCSFLDNLTEELEEDQQPTVYDDYKFVTKDDLEKLGLNHLIGTNLLRAYMHGYFMDIRLYQKAKTIAEPFAFEEYRKKKIQEKIDEERENRVRIK-KLPRINRALAEKLLEEKPKKDKK----------------LDEKGPD-----------VSNPLGDDRFAAMFKNPDFQVDQESEEFKLLHPVMSKHDKRKSK 517
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A3M6VIN9_9STRA (NUC153 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIN9_9STRA) HSP 1 Score: 212 bits (540), Expect = 7.340e-58 Identity = 116/234 (49.57%), Postives = 155/234 (66.24%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSLVANKMRQKTED 705 V + +G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVGTPLL+ YMHG+FMD +L+ ++KAVSEPFAY+++RKKK+K+K+E K +RI+I+ LPK+NRA AER+L K K E EE + NPLGD+RF MF S FEVD ES+ Y HP ++ + R++ ED Sbjct: 325 VVDGAQGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIATFGLDHLVGTPLLKAYMHGFFMDARLYNKVKAVSEPFAYDDWRKKKLKEKVEAKQSNRITIQRRLPKINRATAERILQSDAKRKKNSK----------------EVDEEEVDAD----KAFLNPLGDERFSRMFTSTDFEVDEESDTYRMLHPNAINMKQQRKQKED 538
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A662WTJ8_9STRA (NUC153 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTJ8_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.180e-57 Identity = 117/215 (54.42%), Postives = 151/215 (70.23%), Query Frame = 1 Query: 19 RGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHP 663 +G SG+LL+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVGTPLL+ YMHG+FMD +L+ ++KAV+EPFAY+++RKKK+K+K+E K +RI+I+ LPK+NRA AERLL GD K K + GE A P+ + +NPLGDDRF MF S FEVD ESE Y HP Sbjct: 332 QGKSGVLLVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIATFGLEHLVGTPLLKAYMHGFFMDARLYNKVKAVAEPFAYDDWRKKKLKEKIEAKQANRITIQRRLPKINRATAERLLQ----GDAKSKK---------------QQGEAEAE-MPTADKAFANPLGDDRFSRMFTSNDFEVDEESEAYRLLHP 526
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Match: A0A3F2RWL0_9STRA (NUC153 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWL0_9STRA) HSP 1 Score: 208 bits (530), Expect = 1.430e-56 Identity = 121/235 (51.49%), Postives = 158/235 (67.23%), Query Frame = 1 Query: 4 VANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEQEASVYEDYKFVTTAEVEELGVSNLVGTPLLRGYMHGYFMDMKLFTRLKAVSEPFAYEEYRKKKVKDKMEEKTKSRISIRANLPKVNRAMAERLLDKAGSGDKKDKXXXXXXXXXXPPDXXDEAGEEGAGGSPSGKVSSSNPLGDDRFGAMFESAAFEVDPESEEYARAHPTSL-VANKMRQKTED 705 V +G SG++L+A EQ RV+SYY+P LG AP+WCSFLD LTEELEEE +A+VY+DY+FVT AE+ G+ +LVGTPLL+ YMHG+FMD +L+ ++KAVSEPFAY+E+RK K+K+K+E K +RI+I+ LPK+NRA AER+L K XXXXXXX + SNPLGD+RF +MF S FEVD ES+ Y HP + + + RQK ED Sbjct: 300 VVEGAQGKSGVILVAGEQERVMSYYIPELGIAPKWCSFLDSLTEELEEEAQATVYDDYRFVTRAEIASFGLEHLVGTPLLKAYMHGFFMDARLYNKVKAVSEPFAYDEWRKNKLKEKVEAKQANRITIQRRLPKINRATAERILQTEAKRKKNXXXXXXXXXADA-------------------DKTFSNPLGDERFSSMFTSTDFEVDEESDTYRLLHPNAANITQQQRQKRED 515 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4848.12755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4848.12755.1 >prot_L-elsbetiae_contig4848.12755.1 ID=prot_L-elsbetiae_contig4848.12755.1|Name=mRNA_L-elsbetiae_contig4848.12755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=456bp MVANTRRGDSGLLLMATEQSRVLSYYVPALGPAPRWCSFLDVLTEELEEEback to top mRNA from alignment at L-elsbetiae_contig4848:6208..13181- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4848.12755.1 ID=mRNA_L-elsbetiae_contig4848.12755.1|Name=mRNA_L-elsbetiae_contig4848.12755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6974bp|location=Sequence derived from alignment at L-elsbetiae_contig4848:6208..13181- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4848:6208..13181- >mRNA_L-elsbetiae_contig4848.12755.1 ID=mRNA_L-elsbetiae_contig4848.12755.1|Name=mRNA_L-elsbetiae_contig4848.12755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2736bp|location=Sequence derived from alignment at L-elsbetiae_contig4848:6208..13181- (Laminarionema elsbetiae ELsaHSoW15)back to top |