mRNA_L-elsbetiae_contig4848.12754.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5K6E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6E0_9PHAE) HSP 1 Score: 164 bits (414), Expect = 2.400e-46 Identity = 86/174 (49.43%), Postives = 123/174 (70.69%), Query Frame = -1 Query: 171 DVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGPK-KRKTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKA-------RQAALVAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDE 668 +VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS GP KRK G++T+D NP+C+P M+R+N NGDA SRRQH AA+K+EK+ E+K+A+D+ ++A ++ L A++ A+ H +TIG ++ +M LK+ E ++RI+ LEKK+ML LGD R EL +L+E Sbjct: 30 EVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQERKKAADKRLQEAWKEALETKKKGLAALEAASTHIETIGANMKRMVELKEAEAVGIKRKNRIKVLEKKVMLRLGDETENRAELEFLLNE 203
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5JTM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTM3_9PHAE) HSP 1 Score: 162 bits (409), Expect = 3.630e-44 Identity = 87/172 (50.58%), Postives = 119/172 (69.19%), Query Frame = -1 Query: 171 VPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGP-KKRKTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKARQA------ALVAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDE 665 VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS GP KKRK ++T+D NP+C+P M+R+N NGDA SRRQH AA+K+EK+ E K A+++E ++AR+ L A + AN H +TIG + +M LK+ E ++I+ALEKK++L LGD R EL+ +L E Sbjct: 137 VPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGADVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREKEQEMKAAAEKELQEARKEPLETKKGLAAFEAANTHVETIGADMKRMVELKEAEAVGIKRENKIKALEKKIVLRLGDETENRAELVFLLIE 308
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5KJW8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJW8_9PHAE) HSP 1 Score: 150 bits (380), Expect = 2.360e-40 Identity = 83/173 (47.98%), Postives = 117/173 (67.63%), Query Frame = -1 Query: 171 DVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGPKKRKTG-EITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKARQAAL------VAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDE 668 +VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS G K++TG ++T+D NP+ +P M+R+N NGDA SRRQH AA+K+EK+ E+K A+D+E + AL A++ AN H +IG ++ +M LK+ E ++I+ALEK +ML LGD R EL +L+E Sbjct: 120 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGLSKKRTGGDVTVDSENPVYSPAVMSRLNPNGDALSRRQHFAAIKREKEEERKAAADKELQXXXXXALETKKGPAALEAANTHVDSIGANMKRMVELKEAEAVGIKRENKIKALEKIIMLRLGDETENRAELEFLLNE 292
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5JXM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXM3_9PHAE) HSP 1 Score: 147 bits (370), Expect = 8.410e-37 Identity = 78/182 (42.86%), Postives = 116/182 (63.74%), Query Frame = -1 Query: 171 RKETEAAGAGDEPEDDVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGPK-KRKTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKARQAALVAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDE 713 R++ + G ++VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS GP KRK G++T+D NP+C+P M+R+N NGDA SR + ++ ++ + +E K ++ L A++ AN H +TIG ++ +M LK+ E ++I+ALEKK+ML LGD R EL +L+E Sbjct: 384 REQDKGGDEGKHEGEEVPEWWVFPFLLLTAAYSPWSGRAPSEWKHLDSSDGPSIKRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRSSRRGKQRPTRNFQE---TRKEALKTKKKGLAALEAANTHIETIGANMKRMVELKEAEAVGIKRENKIKALEKKIMLRLGDETENRAELEFLLNE 562
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: D7FV02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV02_ECTSI) HSP 1 Score: 143 bits (360), Expect = 6.930e-36 Identity = 86/212 (40.57%), Postives = 124/212 (58.49%), Query Frame = -1 Query: 171 LRKETE---AAGAGD-------EPEDDVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGPKKR-------------KTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKARQAAL-------VAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDE 716 LR+E A+G+G E +D+PD Y++PYLLLA +S WSGNTPSEWKHL +SSGP+ R + E+ + NP+ +P AM +N+NGDA SRRQ+ A +KKEK+ KK+A ++EN R AL AM++AN H + +I KM L+++ + +IEALE+K+ML + D V+ +L +LDE Sbjct: 259 LRREMASPTASGSGSGANLGRPEGNEDIPDDYYYPYLLLACPWSSWSGNTPSEWKHLAASSGPRNRASKGDKGNSNGNDNSNEVVITDDNPIGSPRAMGLMNANGDAVSRRQYFANIKKEKEQVKKDAKEKENVALRNEALDTRKRGLAAMESANTHVGELSSNIKKMVQLQEESNLAARRKDKIEALERKLMLAISDPNMVKAQLNALLDE 470
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5KGF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF1_9PHAE) HSP 1 Score: 129 bits (323), Expect = 2.510e-32 Identity = 59/103 (57.28%), Postives = 82/103 (79.61%), Query Frame = -1 Query: 363 DVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGP-KKRKTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKARQAAL 668 +VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS GP KKRK G++ +D NP+C+P M+R++ NGDA SRRQH AA+K+EK+ E+K +D+E +++R+ L Sbjct: 117 EVPEWWIFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGGDVNVDSENPVCSPAVMSRLDPNGDALSRRQHFAAIKREKEQERKATADKELQESRKETL 219
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5K7S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7S4_9PHAE) HSP 1 Score: 119 bits (298), Expect = 4.030e-28 Identity = 76/178 (42.70%), Postives = 103/178 (57.87%), Query Frame = -1 Query: 159 DVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGP-KKRKTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKAR-------QAALVAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDEAFSA 668 +VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS GP KKRK G++T+D NP+C+P + AA KE +KEA E KK + L A++ AN H +TIG ++ +M LKQ E ++I+ALEK++ML LGD R EL + +E S+ Sbjct: 105 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSKKRKGGDVTVDSENPVCSPA---------------ERKAATDKELQEARKEAL--ETKKXXXXXXXXXKKGLAALEAANTHIETIGANMKRMVELKQAEAVGIKRENKIKALEKRIMLRLGDETENRAELEFLPNEFLSS 265
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5KVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE3_9PHAE) HSP 1 Score: 102 bits (255), Expect = 1.300e-23 Identity = 44/73 (60.27%), Postives = 57/73 (78.08%), Query Frame = -1 Query: 456 DDVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGPK-KRKTGEITLDGGNPLCNPTAMARVNSNGDAFSR 671 ++V +W+ FP+LL AAYSPWSG PSEWKHL+SS GP KRK G++T+D NP+C+P M+R+N NGDA SR Sbjct: 30 EEVSEWWVFPFLLHTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGGDVTVDSENPVCSPAVMSRLNPNGDALSR 102
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5KE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE63_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.830e-22 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = -1 Query: 171 KKRKTGEITLDGGNPLCNPTAMARVNSNGDAFSRRQHAAAVKKEKDLEKKEASDEENKKARQAALVAMQTANAHAKTIGDSIVKMTSLKQKEYEKGVNRSRIEALEKKMMLGLGDVPAVRLELLKMLDE 557 KKRK G++T+D NP+C+P M+R+N NGDA SRRQH AA+K+E++ E+K A+D+E Q AN H +TIG ++ +M LK+ E ++I+ALEKK+ L LGD R EL +L+E Sbjct: 47 KKRKGGDVTVDSENPVCSPAVMSRLNPNGDALSRRQHFAAIKREQEHERKAAADKE------------QAANTHVETIGANMKRMVELKEAEAVGIKRENKIKALEKKIRLRLGDGTENRAELEFLLNE 163
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Match: A0A6H5KDD8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD8_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.090e-16 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = -1 Query: 501 DVPDWYFFPYLLLAAAYSPWSGNTPSEWKHLESSSGPK-KRKTGEITLDGGNPLCNP 668 +VP+W+ FP+LLL AAYSPWSG PSEWKHL+SS GP KRK G++T+D NP+ +P Sbjct: 117 EVPEWWVFPFLLLTAAYSPWSGQAPSEWKHLDSSDGPSIKRKGGDVTVDSDNPVSSP 173 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4848.12754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4848.12754.1 >prot_L-elsbetiae_contig4848.12754.1 ID=prot_L-elsbetiae_contig4848.12754.1|Name=mRNA_L-elsbetiae_contig4848.12754.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp MLSPMVFAWALAVCMATRAACLAFLFSSSLASFFSRSFSFLTAAACWRRLback to top mRNA from alignment at L-elsbetiae_contig4848:1839..2683+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4848.12754.1 ID=mRNA_L-elsbetiae_contig4848.12754.1|Name=mRNA_L-elsbetiae_contig4848.12754.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=845bp|location=Sequence derived from alignment at L-elsbetiae_contig4848:1839..2683+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4848:1839..2683+ >mRNA_L-elsbetiae_contig4848.12754.1 ID=mRNA_L-elsbetiae_contig4848.12754.1|Name=mRNA_L-elsbetiae_contig4848.12754.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=942bp|location=Sequence derived from alignment at L-elsbetiae_contig4848:1839..2683+ (Laminarionema elsbetiae ELsaHSoW15)back to top |