mRNA_L-elsbetiae_contig4841.12743.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI) HSP 1 Score: 157 bits (396), Expect = 1.730e-44 Identity = 76/126 (60.32%), Postives = 92/126 (73.02%), Query Frame = 1 Query: 283 NIPVFLDRTFKMIELTPDDIVCWSIAGDSFIIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRK 660 +IPVFLDRTF IE T DIVCWS GDSFI+K+V+ E +LPS+YNHK F+SFVRQLNFYGFKK+RGR + S A ++S SWEE+ HPQFRRGR DLL I+R+KD GR+KR+ Sbjct: 18 HIPVFLDRTFSFIEDTSPDIVCWSEVGDSFIVKKVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASSRASSXXXXXXXXAAEAEESASWEEFKHPQFRRGRRDLLVGIKRQKDDGRMKRR 143
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE) HSP 1 Score: 144 bits (363), Expect = 1.410e-36 Identity = 74/131 (56.49%), Postives = 97/131 (74.05%), Query Frame = 1 Query: 373 IIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKS--VDGAAHGGAVAT-PKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRKRGESREPGILTTLATDVGTVSGDLKAVNDRLD 756 ++ V++ E +LPS+YNHK F+SFVRQLNFYGFKK++G AS RS++ D GA +T ++S SWEE+ HPQFRRGR DLL I+R+KD GRLKRKR +S++ ILTTL DV T+S DL+ N +LD Sbjct: 5 LLTSVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRTSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLD 135
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.300e-32 Identity = 67/131 (51.15%), Postives = 88/131 (67.18%), Query Frame = 1 Query: 364 DSFIIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRKRGESREPGILTTLATDVGTVSGDLKAVNDRLD 756 D F V+ E +LPS+YNHK F+SFVRQLNFYGFKK++G + R S + +S SW+E+ HP+FRRGR DLLA I+R+KD GR+KRK+ E + G L+TL TDV +S DL+A N +LD Sbjct: 21 DVFATLHVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSASSVHPPPSAVAADESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLD 151
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI) HSP 1 Score: 126 bits (317), Expect = 2.380e-31 Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 1 Query: 358 AGDSFIIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRKRGESREPGILTTLATDVGTVSGDLKAVNDRLD 756 A + +V+ E +LPS+YNHKNF+SFVRQLNFYGFKK++G AS RS+S D SWEE+ HPQFR+GR DLL I+R+KD G LKRK+ + R+ IL TLA +VG++ DL+ N +LD Sbjct: 4 ASQRDVSSKVLAFEGLLPSYYNHKNFLSFVRQLNFYGFKKVKGGAS-RSESSD---------------SWEEFMHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLD 120
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI) HSP 1 Score: 119 bits (298), Expect = 2.790e-30 Identity = 62/102 (60.78%), Postives = 77/102 (75.49%), Query Frame = 1 Query: 382 QVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKS--VDGAAHGGAVAT-PKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRKRGESRE 678 QV++ E +LPS+YNHK F+SFVRQLNFYGFKK++G AS RS+S D GA +T ++S SWEE+ HPQFRRGR DLL I+R+KD GRLKRKR + E Sbjct: 39 QVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRSSAADSQGEAGAGSTGARESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRDDEVE 140
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: A0A7S2ALL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALL4_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.560e-25 Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 295 FLDRTFKMIELTPDDIVCWSIAGDSFIIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRKRGESRE--PGILTTLATDVGTVSG 726 F+ +T+ M+ P D+ CWS+ GDSFIIK L ++LP F+ HKNF SFVRQLNFYGF+K+R +LR P + W E+ H FRR P+LL I+R + +K G E +T + T + T++G Sbjct: 4 FIAKTYTMVNSCPSDVCCWSLLGDSFIIKDQSLFADMLPHFFKHKNFRSFVRQLNFYGFRKIRAEMALR---------------PTRPTHWSEFRHENFRRNEPELLKIIKRTGTTEHIKATEGSELEILRQQVTAMQTQIDTLTG 134
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: A0A7S2F3P3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3P3_9STRA) HSP 1 Score: 110 bits (274), Expect = 3.420e-24 Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 295 FLDRTFKMIELTPDDIVCWSIAGDSFIIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRKKDSGRLKRKRGESRE--PGILTTLATDVGTVSG 726 F+ +T+ M+ P D+ CWS+ GDSFIIK L ++LP F+ HKNF SFVRQLNFYGF+K+R +LR P + W E+ H FRR P+LL I+R + +K G E +T + T + T++G Sbjct: 4 FIAKTYTMVNSCPSDVCCWSLLGDSFIIKDQSLFADMLPHFFKHKNFRSFVRQLNFYGFRKIRAEMALR---------------PTRPTHWSEFRHENFRRNEPELLKIIKRTGTTEHIKATEGSELEILRQQVTAMQTQIDTLTG 134
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: A0A024TKN1_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKN1_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.960e-21 Identity = 52/119 (43.70%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 283 NIPVFLDRTFKMIELTPDDIVCWSIAGDSFIIKQVM-LLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGR-ASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRK 633 ++PVFL +T+ MIE D + WS G+SFIIK++ E+LP ++ H NF SF RQLNFYGF K++ LR+K +D AV + W E++HP F R PD + IRRK Sbjct: 3 HVPVFLQKTYDMIENCADTVATWSTTGESFIIKRINEFASEVLPRYFKHNNFSSFARQLNFYGFHKVKKEDILLRAKGLDSPTDPDAVLEAQ---GWWEFSHPLFLRDHPDKMGSIRRK 118
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.450e-21 Identity = 49/114 (42.98%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 289 PVFLDRTFKMIELTPDDIVCWSIAGDSFIIKQVMLLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRR 630 PVFL +T++MI+ P ++ WS AGD+FI+K + +LP F+ HKNF SFVRQLNFYGF+K+R +L S + +W E+ H +F RG+P+LL I+R Sbjct: 58 PVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEAFANLLPRFFKHKNFRSFVRQLNFYGFRKLRTDGALISD---------------RPSNWWEFRHEKFLRGKPELLTHIKR 156
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Match: M4C1L5_HYAAE (HSF_DOMAIN domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1L5_HYAAE) HSP 1 Score: 99.8 bits (247), Expect = 3.590e-21 Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 1 Query: 268 GGFGKNIPVFLDRTFKMIELTPDDIVCWSIAGDSFIIKQVM-LLEEILPSFYNHKNFMSFVRQLNFYGFKKMRGRASLRSKSVDGAAHGGAVATPKKSGSWEEYTHPQFRRGRPDLLADIRRK 633 GG G PVFL +T+ MIE +P + CWS AG SFIIK + +LP ++ H NF SFVRQLNFYGF+K + + S D +S +W E+ H +F RGR +L+A IRRK Sbjct: 29 GGNGSAAPVFLQKTYDMIESSPPAVACWSEAGTSFIIKLPREFAKTMLPRYFKHNNFSSFVRQLNFYGFRKHKKDEIVISTEED------------ESKNWWEFYHEKFVRGRQELMAQIRRK 139 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4841.12743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4841.12743.1 >prot_L-elsbetiae_contig4841.12743.1 ID=prot_L-elsbetiae_contig4841.12743.1|Name=mRNA_L-elsbetiae_contig4841.12743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp MERYNSNGTQETGRDSARRVRSSSSSASSAVVSPATATFSQEGGFGKNIPback to top mRNA from alignment at L-elsbetiae_contig4841:4690..9246+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4841.12743.1 ID=mRNA_L-elsbetiae_contig4841.12743.1|Name=mRNA_L-elsbetiae_contig4841.12743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4557bp|location=Sequence derived from alignment at L-elsbetiae_contig4841:4690..9246+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4841:4690..9246+ >mRNA_L-elsbetiae_contig4841.12743.1 ID=mRNA_L-elsbetiae_contig4841.12743.1|Name=mRNA_L-elsbetiae_contig4841.12743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1230bp|location=Sequence derived from alignment at L-elsbetiae_contig4841:4690..9246+ (Laminarionema elsbetiae ELsaHSoW15)back to top |