mRNA_L-elsbetiae_contig484.12742.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig484.12742.1
Unique NamemRNA_L-elsbetiae_contig484.12742.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig484.12742.1 vs. uniprot
Match: D8LD16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD16_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 8.610e-34
Identity = 74/96 (77.08%), Postives = 76/96 (79.17%), Query Frame = 2 
Query:  713 PAADADPFAELAAGGASN----AGRRGPGGEQRFEKGDEVLYVRGSDPPLDGVVQKVHLEDETPYYTVLINVTGREKNTDHLHLRHKGDEGKATGG 988
            PA D DPFAELAAG        AGRR P GE+ FEKGDEVLY+RGSDPPLDGVVQKVHLEDETPYYTVLI VTGREKNTD  HLRHKG EG A  G
Sbjct:   19 PAVDDDPFAELAAGXXXXXXXXAGRREPDGEEIFEKGDEVLYIRGSDPPLDGVVQKVHLEDETPYYTVLIAVTGREKNTDRAHLRHKGAEGAAANG 114
[Close]
BLAST of mRNA_L-elsbetiae_contig484.12742.1 vs. uniprot
Match: A0A6H5KW83_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW83_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.560e-20
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 2 
Query:  800 FEKGDEVLYVRGSDPPLDGVVQKVHLEDETPYYTVLINVTGREKNTDHLHLRHKGDE 970
            F  GDEVLY+RGSDPPLDGVVQKVHLEDETPYYTVLI +TGREKNTD  HLRHKG E
Sbjct:  698 FAPGDEVLYIRGSDPPLDGVVQKVHLEDETPYYTVLIAITGREKNTDRAHLRHKGAE 754
[Close]
BLAST of mRNA_L-elsbetiae_contig484.12742.1 vs. uniprot
Match: A0A7R9UBE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.410e-6
Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 2 
Query:  770 GRRGPG-GEQRFEKGDEVLYVRGSDPPLDGVVQKVHLEDETPYYTVLINVTGREKNTDHLHLRHKG 964
            G  GP  G   + +G++V+YV        GVV+KVH +D  PYY+V +   GREKNTDH HL+  G
Sbjct:   64 GAAGPAQGAPPYAQGEQVVYVDSQGAQTMGVVEKVHYDDNPPYYSVRL-ADGREKNTDHTHLQKAG 128
[Close]
BLAST of mRNA_L-elsbetiae_contig484.12742.1 vs. uniprot
Match: A0A7S1UFQ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFQ4_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.390e-6
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 2 
Query:  800 FEKGDEVLYVRGSDPPLDGVVQKVHLEDETPYYTVLINVTGREKNTDHLHL 952
            FEKG+ V+Y  G      GV++KVH +D  PYY++ +   GREKNTDH  +
Sbjct:   45 FEKGETVMYTDGQGVQTMGVIEKVHYDDNPPYYSIKL-ANGREKNTDHTRV 94
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig484.12742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LD16_ECTSI8.610e-3477.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW83_9PHAE1.560e-2085.96Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7R9UBE7_9STRA3.410e-645.45Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1UFQ4_9STRA4.390e-647.06Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig484contigL-elsbetiae_contig484:32527..38921 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size2149
Cds size1833
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig484.12742.1prot_L-elsbetiae_contig484.12742.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig484 32841..38921 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816475.5277767-UTR-L-elsbetiae_contig484:32526..328401622816475.5277767-UTR-L-elsbetiae_contig484:32526..32840Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig484 32527..32840 -
1691683587.079498-UTR-L-elsbetiae_contig484:32526..328401691683587.079498-UTR-L-elsbetiae_contig484:32526..32840Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig484 32527..32840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816475.5423274-CDS-L-elsbetiae_contig484:32840..331751622816475.5423274-CDS-L-elsbetiae_contig484:32840..33175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 32841..33175 -
1691683587.0931714-CDS-L-elsbetiae_contig484:32840..331751691683587.0931714-CDS-L-elsbetiae_contig484:32840..33175Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 32841..33175 -
1622816475.5543792-CDS-L-elsbetiae_contig484:34304..348121622816475.5543792-CDS-L-elsbetiae_contig484:34304..34812Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 34305..34812 -
1691683587.1113613-CDS-L-elsbetiae_contig484:34304..348121691683587.1113613-CDS-L-elsbetiae_contig484:34304..34812Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 34305..34812 -
1622816475.5692375-CDS-L-elsbetiae_contig484:36379..365731622816475.5692375-CDS-L-elsbetiae_contig484:36379..36573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 36380..36573 -
1691683587.1296582-CDS-L-elsbetiae_contig484:36379..365731691683587.1296582-CDS-L-elsbetiae_contig484:36379..36573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 36380..36573 -
1622816475.5799606-CDS-L-elsbetiae_contig484:37262..377631622816475.5799606-CDS-L-elsbetiae_contig484:37262..37763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 37263..37763 -
1691683587.1443512-CDS-L-elsbetiae_contig484:37262..377631691683587.1443512-CDS-L-elsbetiae_contig484:37262..37763Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 37263..37763 -
1622816475.5899389-CDS-L-elsbetiae_contig484:38626..389211622816475.5899389-CDS-L-elsbetiae_contig484:38626..38921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 38627..38921 -
1691683587.1575325-CDS-L-elsbetiae_contig484:38626..389211691683587.1575325-CDS-L-elsbetiae_contig484:38626..38921Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig484 38627..38921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig484.12742.1

>prot_L-elsbetiae_contig484.12742.1 ID=prot_L-elsbetiae_contig484.12742.1|Name=mRNA_L-elsbetiae_contig484.12742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=611bp
GGVRQRWWHPRGRVCRFLRGVVRLVAGCQGGSWCRPASAGISWASRGPTA
AAAAAAAAAGQCFVSAGRAGGATAVCAAARCVRGSATAAAGATTTTAAAA
AGLRCFRSTSSTAAAAAAAAAAAAVWPCQLPSNRSTAAVPPGTVPSAATA
TTLAAAIPQAAAAAAAAAAAAAAAAAAAADPSSGWRGAPCPPRRTTSAVC
PTIFAAADAADAADAADADAAGAGRCGGPDSIATTSPAGGRCRPFRGAGG
GRSEQRRQARAGRRAALRKGRRSAVRPRERPSARRRRAEGAPRRRDALLH
GAHQRDGAREEHRPLALATQGGRGEGDGRGLRRSSSNTSSSNSNTSSSSS
NSICSSSSSSSSSSSSSSSSSSSPYPNPHKHSLKSAPPCPPSLRKGFRGG
SSSRGRGRRRRRCRCLRSLASRFRWPWRREQAWTGLEGAILSGGKGRSQG
CRRQQRRRDWLLRSRYEVCWRLRRCCCCCCCCCCCCCLLQCQYNSKRRIP
WRGQPVRLVLTRPNWHTLVKSHRGPDLEPAGITAGRAGGLEAAPPPPPPP
LPMPAFGQACCACCFFSPERAGVLGGSFSLCTERLAPAPRPAPPLPCRAV
ATPAECIRSG*
back to top

mRNA from alignment at L-elsbetiae_contig484:32527..38921-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig484.12742.1 ID=mRNA_L-elsbetiae_contig484.12742.1|Name=mRNA_L-elsbetiae_contig484.12742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6395bp|location=Sequence derived from alignment at L-elsbetiae_contig484:32527..38921- (Laminarionema elsbetiae ELsaHSoW15)
GGGGGGGTTCGCCAACGGTGGTGGCACCCCCGGGGGCGGGTTTGTCGCTT
CCTTCGAGGCGTTGTCCGTCTTGTCGCCGGCTGCCAAGGCGGCAGCTGGT
GTCGCCCAGCCAGCGCAGGGATTTCCTGGGCCTCCCGGGGCCCAACAGCA
GCAGCAGCAGCAGCAGCCGCAGCAGCAGGGCAGTGCTTTGTTTCCGCAGG
GCGCGCAGGCGGCGCAACCGCAGTTTGTGCAGCAGCGCGGTGTGTTCGGG
GGTCAGCAACCGCAGCAGCAGGCGCCACCACAACAACAGCAGCAGGTGCG
GGGGAGAGTGCGGGGAGAGGAGAAAACGGTCGCGGCGCCGCGTGTTTTGT
TGGTTTGTGGGCTGTTTTTGTTCTTTGCAAATATTTTGCTGGCCCACCGA
CCGAAATACGCTGTCGTGTTTGCGTGCTTACGTGCATATGCATGTCTTAG
CTGACGCCGGGTGCCGGCCGGTGTTGGGACCGTCGGGAAAAAGATGAGAC
CTCGAGTGAATCGCGTGGCCCCCTCTGCGCTCTTTGCTGTTTTGTTTTTC
GAATTCGTCCCGAAAACGCCTACTTACTCTCTGAGAAGAAAACAACAGCA
GTCCCTCACCGTGTCACTTTTCGCGTCGTACCTTGGTCACCCCTCGTTCC
TCGGATGGGCTTATTTAGTTCAACTCGCAGCTGCACAGCGCACACAGACG
CTCTACATAGATTAGCGAGTCAAAAGGGCCTTATATATCTCTCTCTTTGT
TTTTTCTCAGGGCCTATTCGTGTCGGTACGGTATCTTGTGTGGTTGGGGA
GCAAAAATGTGGAACAAATGTGGAACGAATGTGGAACAAATGTGGAACAA
ATGTGGAACAAATGTGGAACAAATGTGGACCAAATTCTCTCTTTGTTTTT
GCTTAGGGCCTATTCGTGTCGGTACGGTATCTTGTGTGGTTGGGGATCAA
ATGGAGAACATACATACGTATCAACTGTCTTTTCCCACGATTTTGGGCCT
CTGTGAGGGGTAGGAACGGTGCGCGGGCCACCTCGAAAGAGATGCATAGG
CATTATGGCCAAACGACCAAAGGGGCAACAAGTGAGAACGATCCTTGTCC
CGCCCCCCGCCCCACCCACCCCCCTTCCGTCGGCGTTATTTTCCACTTGG
CAAACTAGCAGCAGCAGGACTTCGCTGCTTTCGGTCAACAAGCTCCACAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTTGGCCATGCCAA
CTTCCCTCAAACCGCTCAACAGCAGCAGTACCCCCAGGCACAGTACCATC
CGCAGCAACCGCCACAACACTTGCAGCAGCAATTCCACAAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GATCCAAGCTCCGGGTGGAGGGGTGCCCCCTGCCCACCAAGGCGCACAAC
ATCCGCAGTTTGCCCAACAATTTTCGCCGCAGCAGATGCAGCAGATGCAG
CAGATGCAGCAGATGCAGATGCAGCAGGGGCAGGCAGGTGTGGCGGGCCC
GACTCCATTGCCACAACCAGCCCCGCCGGCGGCCGATGCCGACCCTTTCG
CGGAGCTGGCGGCGGGAGGAGCGAGCAACGCCGGCAGGCGCGGGCCGGGA
GGAGAGCAGGTACAAGGGGGGGGGGGGGGGGCGCCGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGCATGCGATAAGGG
CGGATTCCAGTGTGCCTAGGCTTCGCTGGGTGTCTTGCGTGAATTCATCC
GATGATTTTGGGCACGTATTTAGGTCGATATATATTGTGTCGACGGTAGG
AAGGTCGGGGAGGAGAGGCGCCCTTGGTGGTCGATGTTTATAGGTATGGA
ACCAACCACCCCTGCCCCCTTTTGTGTCTCCCTTTCCTTGGGGTGTTGGG
GGGCCCCGACACTAGTTCTACGATGATTTTCCGACGCGTCGTATGTACGA
AAGGAGTCTCCTGTCCACTCGTCGCGCGTGAGCGCACATGCCAACCAACA
CACAAACACACACACACACACATACACACACACCTCCTATGTGCGTGACC
CCGGTTGGGTCGTCGGGCTAGTCGTAGTGGAGGAAGGGGGCCAGTGGGGC
AGACGACAAATAAGCCAACAATGGGAGGGAAAAAAAGTTAACTGGTGAAC
GTGTCCGTAAGAAGAAAAAGAAAAAAAAAAACACACACACACACACACAC
AATACATACACACACACATAAACATCCGGCTCCTTTACCCGTCCTTCTGC
TCCCACGTCATATATTTTGTGCCACTCACTAAATACCACGAAAAACAGCG
CTTCGAAAAGGGAGACGAAGTGCTGTACGTCCGAGGGAGCGACCCTCCGC
TAGACGGCGTCGTGCAGAAGGTGCACCTAGAAGACGAGACGCCCTACTAC
ACGGTGCTCATCAACGTGACGGGGCGAGAGAAGAACACCGACCACTTGCA
CTTGCGACACAAGGGGGACGAGGGGAAGGCGACGGGAGGGGGGTTAGCGC
GCAGGATGGGAGGGGGGCACGAAAGGCAGTGTAGGCATTGGTACGTATGT
ATGTATGCATGCGAAGCTTTCTTTTGGTTTTGGTTCTCCCAAGCCCCCTT
GTTGAAGGGAGTAGACCGGTTGCGTCTTGGAATGACGGTGCCTCCTCCGA
GCGCGAAAACCAAGGTGGCCAAAGGGCGCTCCGCAACAGTGTTAGTAGTA
TGGGAGGGCCCACCAAGATTATGGCATTTCCTAGCTACCATTTCCCAAGG
CCCGGCGAAATATATATAAGTATTAGGCATTATAATCTTGCGTCACCCCC
GGGAGAGCATGAACCCACCTCCCGGAACGGGAAACCTTGTATGTATGTAT
GCATGCGAAGCTTTCTTTTGGTTTTGGTTTTCCCGTGCCCCCTTGTTGGA
GGGGGTCGGCCGGTTGCGTCTTGGAATGACGGTGCCTCCTCCGAGCGCGA
AAACAAGGCGGCCAAAGGGCGCTCCGCAGCGGAGCCACAAAAACGTGTTC
CCCGTTTGACGTGCCCCATCGGCGGTCGGACCAAACGGGCCCCTGCTCAG
CTCGGCTGGAGCGGTGCTGATAGCAGTGTTTTGCTTTGGATGTTCTTCGC
CACCCCGTCTTCTGTTCGAGTGTCCGCTGCCCTCCCGTGCCCTCCCCCGC
CCCGCCTTACCATATTTCTTCATACTTCTATTATTTTGTCGCCGTTTTTT
GTGTGTGTGTGTGTGTGTGTGTGCCACGTTTTGGGGCGACCCCTGGGTGC
AGGGTGCGACGAACGGCCACCAGCCCCAGCAACCACGGGCCGGACCTGAC
GGTGAGTTGAATTAATTAATTTAGATGGAACAGAGTGGGAGTCGGTGTGC
GTGCGAAACGGCTGTTGACGGTAGGGAGGAGGGGGTGCGGAGGCTGAAGG
GGGGGGGGGAGTTTCGGGGGAACCCCCTGCTCTGTCGCGTAGTCAGGATA
GCCAGCCCGGCCGGAAAGTTGCCTGGTTTAGGAAGTATGACCCGTGCAGC
TGCGCGCCTATTCGGCCTTTCTTTTCCGTCTAGTCGGCCCACTGGCCCAC
GTTTACTATCTGCCACACATGTACGTACCGTTGTTTTTTTTTTTTCTCAC
GTTTTAGAATCGTTTTTCAAAATGCCATGCTACACAAGCAATTTGTTTGT
TGTCCCACGTTTCGGTTGGCGTGCGATTGGATGCGGCTGTAGTCGCCCCC
CCCCCCTCCCGTCCGCTTTTGTGTGGGTTGATTTCATGATGAGCTTTTTG
GCGATGACCCCCCCCCACAGCTTGGCCTCTATGTAGGCATCTTCAATGGC
CGCACGCTAGGTACAGTGCGCTCTTCACGGCTCTCCTCGTGTGACCCGTT
GCATGGACGGTGATGATTTTTGTGGCCAAACCTCGTAAAAGACTTTGTGT
CGTTTTTGTGCTGCCTCTCCTCGTTCCACCCGCGCTCCCCCCTTTTGGTT
GGCTGGGAAACTATGAACCAACACAACACCATCCCATGAACTACCACTGC
AGCTTTCGCGTCGCTGGGAGCAGTGGCCTCGTGGGTCAACCCTTCCACTG
CTGCGCCAGCTTCGGCGCAGCAGCAGCAACACCAGCAGCAGCAACAGCAA
CACCAGCAGCAGCAGCAGCAACAGCATTTGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCGTACCCCAAC
CCTCACAAGCACAGCCTCAAGTCGGCCCCCCCGTGCCCCCCAAGCCTTCG
CAAGGGTTTCAGGGGGGGCTCGAGCAGCAGGGGCCGGGGGCGGCGCCGCC
GTCGATGCCGATGCCTCCGGTCCCTGGCCAGCAGGTTCCGGTGGCCGTGG
CGACGGGAGCAGGCGTGGACGGGTCTGGAGGGAGCAATCCTTTCGGGGGG
GAAGGGGAGGAGCCAGGGGTGCCGGCGGCAGCAGCGCCGGCGGGATTGGT
TGTTGCGGAGCAGGTACGAGGTGTGCTGGCGTCTTCGCCGTTGCTGCTGC
TGCTGCTGCTGCTGTTGTTGTTGTTGTTGTCTTCTCCAGTGCCAGTATAA
TTCCAAAAGGCGCATTCGTTGAAAGGCGGTGCAGGAAGATCGTCGTTCCT
CTTACGTACGTAGATATGTAGTCGGAAGCTCCTCTTGTATTCTCCTGGTC
GTTGGCGCGAGAGCGTTGCGGCGGTGGCGAGGCGTTTTCCTGCGCCAAGC
GCGCTCGGTTTCTTATCCCGAGTTTTCGAGTGCGGCCGGCGGGCGGTGCA
CTGGGCACGCACGCGCGGTGCAAAAGAGAGCGGCAGGGCAGGGCGGGCCG
GTCTACACAGCAATTATCTCGCCCGGCGGCACCGCCATCGCTCGCTCGCT
CGCCCGCCCGCCCCCGCCCTTGTGGTATCGATCGTCGATCCCGAGCAGAG
GCGGCGGAGCGTTTTCGCGCCAGTTGCGCCAGTTCTCTTCATTTGTCCCG
TTCGTTCAATCCATTTATTTTTTTGGCGCAAGTAATTTGACTTTTTTTTT
TTTCCGAAAGAGGCGGGGCGTTTTCGCGCCAGTTGCGCCGGTTCTCTTCA
TTTGTCCCGTTCGTTCAATCCATTTTTTTTTTAGGCGCAAGTAATTTGAC
TTTTTTTTTTTTCCGAAAGAGGCGGAGCGTTTTCGCGCCAGTTGCGCCGG
TTCTCTTCATTTGTCCCGTTCGTTGAATCAATTTTTGTTTATTTTGGCAA
GTAATTTGACTTTTTTTTTCCGTCGGTCGCAAATTTTTCCGTCGGTCGCG
GCGCAGTTTGCCTTAAAAGCGCTAAATTTTGATTCTTCGCGACGCTATGT
ATATTTATCCACAGACTGATTGGTACCTCCCCCTCCGGCGCCGGGAGCGC
CTCGGAGCGTGATAAAAACCGTCCAACTTTCGGGTCCAGTTTATTTGTTT
TCGTTTTTCAGTACAAGTATACCCTCTTTAGGGTAAGTTACCCTGCCTGT
GACCACGGGAATCGACCGCGTCAGTGTTGGATTAGTACGGACTCATGGAG
GTGTACTGGATAGAGATATCGGAACGGTTTGCAGTGTGAAGACAACAACA
ACGTTCCGCGTTGCCGCTCTCAACGGCGCTACCCCCCCCCTCCCCCCCCC
GGTCCCCCCCCCCCCCCCCCCCCCCTCCCGGCTGTGTCCGCTCGTCCTGT
GCTTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTCCAGCCTG
GCGGGGGCAACCCGTTCGACTTGTTCTGACGCGGCCGAACTGGCACACGT
TAGTTAAGTCACACCGCGGCCCGGACCTCGAGCCAGCAGGGATAACGGCG
GGAAGAGCGGGCGGCCTAGAGGCAGCGCCGCCGCCGCCGCCGCCGCCGCT
GCCGATGCCAGCCTTTGGCCAGGCCTGCTGCGCTTGTTGTTTTTTCTCGC
CCGAGCGCGCCGGTGTTTTGGGCGGCAGCTTTTCCTTGTGCACGGAACGC
CTTGCCCCCGCCCCCCGCCCCGCCCCTCCCCTCCCCTGTCGTGCTGTGGC
AACCCCGGCCGAATGCATCAGGTCGGGCTGAGGGGGAGTGGCGGTTGAGC
TGGCCACAAGGAGGCGCTCAGAGACCCACCCTCCCGCCGGATTAGCACCG
CACCTTGGTCGGTCGGGGGGAGACAGGGGCGGCGCGGACGCGCTTCCCCG
GACGGAGAGGTGCTCAGCCCGACGTGGCACTACAGAGTACGGATATATCC
CGTTGCTGCGCGAGGAGGGGGGGTTGTGGAGAGGCGTGATTGGGACGGGA
AGACGGCGCGAGAGAGACCGCGGCCGCAGCCGCCGCCGCCGCCGCAAGAA
AAGATGTGTGGGTTTGTAGTGGGCTAGAGGGGGCGTGAACGGAAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig484:32527..38921-

>mRNA_L-elsbetiae_contig484.12742.1 ID=mRNA_L-elsbetiae_contig484.12742.1|Name=mRNA_L-elsbetiae_contig484.12742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3666bp|location=Sequence derived from alignment at L-elsbetiae_contig484:32527..38921- (Laminarionema elsbetiae ELsaHSoW15)
GGGGGGGTTCGCCAACGGTGGTGGCACCCCCGGGGGCGGGTTTGTCGCTT
CCTTCGAGGCGTTGTCCGTCTTGTCGCCGGCTGCCAAGGCGGCAGCTGGT
GTCGCCCAGCCAGCGCAGGGATTTCCTGGGCCTCCCGGGGCCCAACAGCA
GCAGCAGCAGCAGCAGCCGCAGCAGCAGGGCAGTGCTTTGTTTCCGCAGG
GCGCGCAGGCGGCGCAACCGCAGTTTGTGCAGCAGCGCGGTGTGTTCGGG
GGTCAGCAACCGCAGCAGCAGGCGCCACCACAACAACAGCAGCAGGGGGG
GGTTCGCCAACGGTGGTGGCACCCCCGGGGGCGGGTTTGTCGCTTCCTTC
GAGGCGTTGTCCGTCTTGTCGCCGGCTGCCAAGGCGGCAGCTGGTGTCGC
CCAGCCAGCGCAGGGATTTCCTGGGCCTCCCGGGGCCCAACAGCAGCAGC
AGCAGCAGCAGCCGCAGCAGCAGGGCAGTGCTTTGTTTCCGCAGGGCGCG
CAGGCGGCGCAACCGCAGTTTGTGCAGCAGCGCGGTGTGTTCGGGGGTCA
GCAACCGCAGCAGCAGGCGCCACCACAACAACAGCAGCAGCAGCAGCAGG
ACTTCGCTGCTTTCGGTCAACAAGCTCCACAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGTTTGGCCATGCCAACTTCCCTCAAACCGCTCA
ACAGCAGCAGTACCCCCAGGCACAGTACCATCCGCAGCAACCGCCACAAC
ACTTGCAGCAGCAATTCCACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGATCCAAGCTCCGGGTGG
AGGGGTGCCCCCTGCCCACCAAGGCGCACAACATCCGCAGTTTGCCCAAC
AATTTTCGCCGCAGCAGATGCAGCAGATGCAGCAGATGCAGCAGATGCAG
ATGCAGCAGGGGCAGGCAGGTGTGGCGGGCCCGACTCCATTGCCACAACC
AGCCCCGCCGGCGGCCGATGCCGACCCTTTCGCGGAGCTGGCGGCGGGAG
GAGCGAGCAACGCCGGCAGGCGCGGGCCGGGAGGAGAGCAGCAGCAGCAG
GACTTCGCTGCTTTCGGTCAACAAGCTCCACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGTTTGGCCATGCCAACTTCCCTCAAACCGCTC
AACAGCAGCAGTACCCCCAGGCACAGTACCATCCGCAGCAACCGCCACAA
CACTTGCAGCAGCAATTCCACAAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGATCCAAGCTCCGGGTG
GAGGGGTGCCCCCTGCCCACCAAGGCGCACAACATCCGCAGTTTGCCCAA
CAATTTTCGCCGCAGCAGATGCAGCAGATGCAGCAGATGCAGCAGATGCA
GATGCAGCAGGGGCAGGCAGGTGTGGCGGGCCCGACTCCATTGCCACAAC
CAGCCCCGCCGGCGGCCGATGCCGACCCTTTCGCGGAGCTGGCGGCGGGA
GGAGCGAGCAACGCCGGCAGGCGCGGGCCGGGAGGAGAGCAGCGCTTCGA
AAAGGGAGACGAAGTGCTGTACGTCCGAGGGAGCGACCCTCCGCTAGACG
GCGTCGTGCAGAAGGTGCACCTAGAAGACGAGACGCCCTACTACACGGTG
CTCATCAACGTGACGGGGCGAGAGAAGAACACCGACCACTTGCACTTGCG
ACACAAGGGGGACGAGGGGAAGGCGACGGGAGGGGGCGCTTCGAAAAGGG
AGACGAAGTGCTGTACGTCCGAGGGAGCGACCCTCCGCTAGACGGCGTCG
TGCAGAAGGTGCACCTAGAAGACGAGACGCCCTACTACACGGTGCTCATC
AACGTGACGGGGCGAGAGAAGAACACCGACCACTTGCACTTGCGACACAA
GGGGGACGAGGGGAAGGCGACGGGAGGGGGCTTCGGCGCAGCAGCAGCAA
CACCAGCAGCAGCAACAGCAACACCAGCAGCAGCAGCAGCAACAGCATTT
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCCCGTACCCCAACCCTCACAAGCACAGCCTCAAGTCGGCCCC
CCCGTGCCCCCCAAGCCTTCGCAAGGGTTTCAGGGGGGGCTCGAGCAGCA
GGGGCCGGGGGCGGCGCCGCCGTCGATGCCGATGCCTCCGGTCCCTGGCC
AGCAGGTTCCGGTGGCCGTGGCGACGGGAGCAGGCGTGGACGGGTCTGGA
GGGAGCAATCCTTTCGGGGGGGAAGGGGAGGAGCCAGGGGTGCCGGCGGC
AGCAGCGCCGGCGGGATTGGTTGTTGCGGAGCAGGTACGAGGTGTGCTGG
CGTCTTCGCCGTTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTG
TCTTCTCCAGTGCCAGTATAATTCCAAAAGGCGCATTCCTTCGGCGCAGC
AGCAGCAACACCAGCAGCAGCAACAGCAACACCAGCAGCAGCAGCAGCAA
CAGCATTTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCCCGTACCCCAACCCTCACAAGCACAGCCTCAAG
TCGGCCCCCCCGTGCCCCCCAAGCCTTCGCAAGGGTTTCAGGGGGGGCTC
GAGCAGCAGGGGCCGGGGGCGGCGCCGCCGTCGATGCCGATGCCTCCGGT
CCCTGGCCAGCAGGTTCCGGTGGCCGTGGCGACGGGAGCAGGCGTGGACG
GGTCTGGAGGGAGCAATCCTTTCGGGGGGGAAGGGGAGGAGCCAGGGGTG
CCGGCGGCAGCAGCGCCGGCGGGATTGGTTGTTGCGGAGCAGGTACGAGG
TGTGCTGGCGTCTTCGCCGTTGCTGCTGCTGCTGCTGCTGCTGTTGTTGT
TGTTGTTGTCTTCTCCAGTGCCAGTATAATTCCAAAAGGCGCATTCCCTG
GCGGGGGCAACCCGTTCGACTTGTTCTGACGCGGCCGAACTGGCACACGT
TAGTTAAGTCACACCGCGGCCCGGACCTCGAGCCAGCAGGGATAACGGCG
GGAAGAGCGGGCGGCCTAGAGGCAGCGCCGCCGCCGCCGCCGCCGCCGCT
GCCGATGCCAGCCTTTGGCCAGGCCTGCTGCGCTTGTTGTTTTTTCTCGC
CCGAGCGCGCCGGTGTTTTGGGCGGCAGCTTTTCCTTGTGCACGGAACGC
CTTGCCCCCGCCCCCCGCCCCGCCCCTCCCCTCCCCTGTCGTGCTGTGGC
AACCCCGGCCGAATGCATCAGGTCGGGCTGACCTGGCGGGGGCAACCCGT
TCGACTTGTTCTGACGCGGCCGAACTGGCACACGTTAGTTAAGTCACACC
GCGGCCCGGACCTCGAGCCAGCAGGGATAACGGCGGGAAGAGCGGGCGGC
CTAGAGGCAGCGCCGCCGCCGCCGCCGCCGCCGCTGCCGATGCCAGCCTT
TGGCCAGGCCTGCTGCGCTTGTTGTTTTTTCTCGCCCGAGCGCGCCGGTG
TTTTGGGCGGCAGCTTTTCCTTGTGCACGGAACGCCTTGCCCCCGCCCCC
CGCCCCGCCCCTCCCCTCCCCTGTCGTGCTGTGGCAACCCCGGCCGAATG
CATCAGGTCGGGCTGA
back to top