mRNA_L-elsbetiae_contig4828.12721.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE) HSP 1 Score: 254 bits (648), Expect = 2.380e-75 Identity = 130/310 (41.94%), Postives = 183/310 (59.03%), Query Frame = 1 Query: 109 ECWVFSHMNKSGGESVKAVLQAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPMVTVGAYTQGLLPYESRPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSDELEGNQC-PGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASG-RFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 +CWVFSHMNKSGG +V+ ++ ++ + S FDD W SG+ + ++ + T G YT+GL Y+ R CKWFT+FRHPV R+VSA+FYC+ A D LCA +VLDA DL TFA+HWGN+G+RQ LA + E+V + + V + C G+ C P WYR K Y+ + PT P ES + QFL A+E LS YAAVG++E++D S+ LFN L + DWV F+++G KN+ G +F +AL AW P+++ +WLDILLYDHA+ + Q + G+ Sbjct: 51 DCWVFSHMNKSGGMTVRKMIMPFLTEKGVS-----TALFDDIEWSSGRSYAETFVKENAVFTYGGYTEGLRMYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSE-FCQQARGHGDVCIPAWYRQKHYLH----LPHQDDFCGPTQP---------ESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI) HSP 1 Score: 250 bits (639), Expect = 1.550e-74 Identity = 136/307 (44.30%), Postives = 182/307 (59.28%), Query Frame = 1 Query: 130 MNKSGGESVKAVLQAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPMVTVGAYTQGLLPYES---RPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDART--ADLGTFAKHWGNFGMRQLLLAFVSWEEV-ANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 MNK+GG +VK +L W K +N T+G +D W GK +++L + GAYT+GL P+ R CKWFTIFRHP+ RLVSA+FYCK +D LCAT+ LDA DL FA+HWG+FG+RQ LAFV EE+ AN D + + CPGWY LK Y++ + + GS AA + + L+P +ELL+ EYAAVGVLEQ++ SL LFN L MP DW +F G KN+ G F EEA L+++W DP ++ L LD+LLYD+AV + N+Q ++GL Sbjct: 1 MNKAGGSTVKYMLAPWTKAQNV-----TVGLYDSPQWLEGKDFAQDFLGDENSLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQ--LDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE) HSP 1 Score: 209 bits (532), Expect = 1.090e-58 Identity = 117/316 (37.03%), Postives = 174/316 (55.06%), Query Frame = 1 Query: 103 PPECWVFSHMNKSGGESVKAVLQAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPMVTVGAYTQGLLPYES-RPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTES-----WMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 PP CWV++ MNK+GG S++ +++ + N +T+G F + +G V++ L RRP + GAYT+GL PY + CKWFT+ RHP+ RLVSAF YC D LCAT + D+ FA+HWGN G+ Q LAF + ++D + T + P WY+ K Y E R P+ +SA + T+ WM + L+P EELL +YAAVG+LEQ++ S+ LF+ LQ+P +W ++ + +N A+ + LV + DP ++ LWLDILLY+HA + Q + +GL Sbjct: 34 PPACWVYTDMNKAGGTSIRRMIKDYAAATN-----TTVGEFTHTQYNAGDRGVQQILDRRPSLIWGAYTEGLRPYATVLGCKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAF---------EDLNDILVTE-----VKSPPWYKAKLYFEGR---------LGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASSTPRNVHDSKAKND--LLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI) HSP 1 Score: 199 bits (506), Expect = 5.020e-54 Identity = 117/324 (36.11%), Postives = 174/324 (53.70%), Query Frame = 1 Query: 112 CWVFSHMNKSGGESVKAVL-QAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPM-----VTVGAYTQGLL------PYESR-PCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEV----ANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 CW+F+H+ K+GG +VK +L +W G ST +D W+ G+G + + G Y + L P + R PC+WFT+FRHPV RLVSA++YC+ D LCA+ + +R DL TFA+HWGNF +RQ L FVS ++V + +G T++++E PGWY LK ++ R V+ T+P G+ + RP +LL YA VG+LE ++ +L+LF++ L MP + W F+++G N RF E+ L QA +DP+I L LD+ LY AV IFN+Q +G+ Sbjct: 88 CWIFNHLQKAGGTTVKRLLFDSW-------GSESTT--YDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVE--LMPGWYMLKLFLNDRSGVAD------DTSPEGTR--------LEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI) HSP 1 Score: 201 bits (510), Expect = 6.150e-54 Identity = 119/324 (36.73%), Postives = 181/324 (55.86%), Query Frame = 1 Query: 103 PPECWVFSHMNKSGGESVKAVLQAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEY---LSRRPM--VTVGAYTQGLLPYE--SRPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSD-----ELEGNQCPGWYRLKQYVE--SRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 P +CWVF H+ K GG +VK +L R + G R ++ +D W+ G + + L+R V G YT+ L E C++FT+FRHP+ R+VSA+FYC+ D CA+ V+DA+ DL TFAKHWGNF +RQ L FV +DGV + + T + + + + GWY+LK Y+E +G + A T AA E+ ++ L+PA +L+ Y AVG+LEQ++ +L LF+ L++P + W A F + G + + R E+ L QAW D +++ + LD+LLY+HAV +F+ QA +GL Sbjct: 153 PDQCWVFMHLQKCGGSTVKYML------RRSYGSRYSI--YDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVP------SDGVQEYIRTPEAQALHDFDLKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVE--HDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE) HSP 1 Score: 190 bits (483), Expect = 1.320e-51 Identity = 107/318 (33.65%), Postives = 159/318 (50.00%), Query Frame = 1 Query: 106 PECWVFSHMNKSGGESVKAVLQAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPMVTVGAYTQGLLPYESRPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTES-------WMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGLFL 1038 P CWVF+H NK+GG +VK L+ + + RN + W+ R KG+ ++ L+ +P++ G Y +GL + CKWFT+ RHP+ RL+SAF+YC G RD LCA + D+ FAKHWGN+ + Q L V E+ A+ VD P W++ K Y E R PG S A + W+ L+P EELL YAAVG+LE + S+ LF+ L++P +W + + + + E+ A L A DP ++ +WLD+LLY++A + Q + L L Sbjct: 35 PTCWVFTHNNKAGGTTVKTHLRNYAESRNETVALCHSDWYA----RGDKGI-QDLLNDKPVLIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIF-AEEVD-------------APAWFKAKLYFEGRLGY-----------PGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWTVASASLSPRKSQNKIV-EKKAMLAAAMTDPVLRQYVWLDLLLYEYACSLHEEQLRRYDLAL 321
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE) HSP 1 Score: 186 bits (473), Expect = 2.560e-51 Identity = 100/228 (43.86%), Postives = 133/228 (58.33%), Query Frame = 1 Query: 358 FRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANAD---GVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 ++ P+ RLVSA+FYCK D LCA++VL A DL TFAKHWGN+G+RQ LAFV E+V A+ G+D PGWYR+K+Y E++ V A T + M L+P E+LLSR Y+AVG+LE+++ S+ LFN L++P +W + + G KN R EEA AL AW DP + LWLDI LYDHAV + N+Q EHG+ Sbjct: 18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFVGAEDVFAAEQERGIDGRPV--------MFPGWYRVKEYFENQFDVEQERALMQETG-------ASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.460e-48 Identity = 110/318 (34.59%), Postives = 162/318 (50.94%), Query Frame = 1 Query: 103 PPECWVFSHMNKSGGESVKAVLQ-AWVKRRNASGKRSTMGWFDDRPWRSG-----KGVVKEYLSRRPMVTVGAYTQGLLPYE--SRPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNASGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 P +CWVF H+ K GG +VK +L+ W R +D W+ G K K L + V G YT+ L E C++FT+FRHP+ R+VSA+FYC+ D CA+ V+ A+ DL TFAKHWGNF +RQ L FV ++V Y+LK Y+E AA ++ +++ L+PA +L+ Y AVG+LEQ++ +L LF+ TL MP ++W F ++G + + E L QAW D +++ + LD+LLY+HAV +F++QA HGL Sbjct: 174 PGQCWVFMHLQKCGGSTVKDLLEDRWGSR---------FFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQE----------------------YQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEIETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: A0A6H5JQM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM0_9PHAE) HSP 1 Score: 150 bits (379), Expect = 3.380e-35 Identity = 93/311 (29.90%), Postives = 140/311 (45.02%), Query Frame = 1 Query: 112 CWVFSHMNKSGGESVKAVL-QAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPMVTVGAYTQGLLPYESRPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNA---SGRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 CW+F HM+KSG + V + W K FD WR G G + ++ + G + L ++ R CKW TIFRHP+ RL+SA+ +C A +DP+C + L FA+ WGNF MRQ L VS V + G WY +K+Y+ G + + + L P + LLS +YAAVG+ ++ + ++ LF+ L M LDW +S+ G + E+ QA +P I +AL LD+ LY+HA+ +F Q + G+ Sbjct: 273 CWIFMHMDKSGASGARRVATERWRKDELV---------FDTVQWRRGDGFAADVMASHWKLLHGGCVESLRNHKERSCKWLTIFRHPIARLLSAYHHCLEAPKDPVCPP----TESTGLVVFAELWGNFAMRQFALESVS------PSAVKEWAAQRQARTGTSM--WYLVKEYLARGG--------------------IAEDEVLESMLEPVKGLLSTQYAAVGIAQELETTMVLFSKALSMEGLDWSSSWATLGINEEVKQDSEYDIAESEPFRQALENPRIVSALRLDMSLYEHAMHVFKDQVAQFGI 542
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Match: D8LU75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU75_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.170e-34 Identity = 93/305 (30.49%), Postives = 137/305 (44.92%), Query Frame = 1 Query: 130 MNKSGGESVKAVL-QAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRRPMVTVGAYTQGLLPYESRPCKWFTIFRHPVHRLVSAFFYCKGARRDPLCATLVLDARTADLGTFAKHWGNFGMRQLLLAFVSWEEVANADGVDDSMCTSDELEGNQCPGWYRLKQYVESRGAVSSAAAAPAPTAPGGSSAAVMTESWMHQFLRPAEELLSREYAAVGVLEQFDVSLALFNATLQMPDLDWVASFKQTGTKNAS---GRFAREEAAALVQAWADPDIQAALWLDILLYDHAVGIFNRQATEHGL 1032 M+KSG + V + W K FD WR G G + ++ R + G + L ++ R CKW TIFRHP+ RL+SA+ +C GA +DP+C + L FA+ WGNF MRQ LA VS V + G WY +K+Y+ G + + + L P + LLS +YAAVG+ ++ ++ LF+ L M LDW +S+ G + E+ QA +P I +AL LD+ LY+HAV +F Q + G+ Sbjct: 1 MDKSGASGARRVATEQWRKDELV---------FDTVQWRRGDGFAADVMASRWKLLHGGCVESLRNHKGRSCKWITIFRHPIARLLSAYDHCLGAPKDPVCPP----TESTGLAAFAELWGNFAMRQFALAAVS------PSAVKEWAAQRQARTGTSM--WYLVKEYLARGG--------------------IAEDEVLGSKLEPVKGLLSTQYAAVGIAQELKTTMVLFSKALSMEGLDWSSSWATLGINEEDKQDSEYDITESEPFRQALENPRIVSALRLDMSLYEHAVHVFKDQVAQFGI 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4828.12721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4828.12721.1 >prot_L-elsbetiae_contig4828.12721.1 ID=prot_L-elsbetiae_contig4828.12721.1|Name=mRNA_L-elsbetiae_contig4828.12721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=304bp MNKSGGESVKAVLQAWVKRRNASGKRSTMGWFDDRPWRSGKGVVKEYLSRback to top mRNA from alignment at L-elsbetiae_contig4828:4623..8722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4828.12721.1 ID=mRNA_L-elsbetiae_contig4828.12721.1|Name=mRNA_L-elsbetiae_contig4828.12721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4100bp|location=Sequence derived from alignment at L-elsbetiae_contig4828:4623..8722+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4828:4623..8722+ >mRNA_L-elsbetiae_contig4828.12721.1 ID=mRNA_L-elsbetiae_contig4828.12721.1|Name=mRNA_L-elsbetiae_contig4828.12721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1824bp|location=Sequence derived from alignment at L-elsbetiae_contig4828:4623..8722+ (Laminarionema elsbetiae ELsaHSoW15)back to top |