mRNA_L-elsbetiae_contig4825.12716.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: D7FLN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN7_ECTSI) HSP 1 Score: 246 bits (627), Expect = 2.950e-76 Identity = 122/158 (77.22%), Postives = 144/158 (91.14%), Query Frame = 2 Query: 131 RQAHSHGMGSEGDGVWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGAVCVALAAGTFLYVALMEVLPPELASTEHGWAKMVSLLSGFSVSAGVGWLVG 604 R AH+HG+G EGDGVWVRLALLLALSVHSVMEGLGVGA++TKAY LLFAI +HKG+A YALGA+LLQSGV KQ+TL++LAFSAMTP+GI +GA+I++D ++DS GAVCVALAAGTFLYV+LMEVLPPELASTE+GW+KM SL+ GF V+ GVGWLVG Sbjct: 196 RGAHAHGLGEEGDGVWVRLALLLALSVHSVMEGLGVGAEATKAYDLLFAIGVHKGIAGYALGAALLQSGVHAKQVTLYILAFSAMTPLGILIGAIIQQDADNDSGGAVCVALAAGTFLYVSLMEVLPPELASTENGWSKMGSLVLGFLVATGVGWLVG 353
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: D7FLN8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLN8_ECTSI) HSP 1 Score: 227 bits (579), Expect = 1.750e-68 Identity = 118/137 (86.13%), Postives = 130/137 (94.89%), Query Frame = 2 Query: 194 LLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGAVCVALAAGTFLYVALMEVLPPELASTEHGWAKMVSLLSGFSVSAGVGWLVG 604 LLALSVHSVMEGLGVGAK+TKAY+LLFAI +HKGLAAYALGASLLQSGV GKQ+TLFV+AFSAMTP+GI LGA+IE+DGEDDS GAVCVALAAGTFLYV+LMEVLPPELASTE+GW+KM SL+ GF VSAGVGWLVG Sbjct: 263 LLALSVHSVMEGLGVGAKTTKAYNLLFAIGVHKGLAAYALGASLLQSGVYGKQVTLFVIAFSAMTPLGILLGALIEKDGEDDSGGAVCVALAAGTFLYVSLMEVLPPELASTENGWSKMGSLVLGFVVSAGVGWLVG 399
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: A0A3R7GT88_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GT88_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.280e-30 Identity = 71/145 (48.97%), Postives = 101/145 (69.66%), Query Frame = 2 Query: 113 RSNGGHRQAHSHGMGSEGDG--VWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELASTEHG 538 RS+ GH +H G G + D + V + L +ALS HSV+EGLG+GA++ A+ + AI +HKGLAA+ALG+ L+QS + Q+TL+++ FS M+ IGI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E HG Sbjct: 134 RSHAGH--SHLGGAGDQADAGSLAVAMVLFIALSFHSVLEGLGIGAQTETAWGVFMAIVMHKGLAAFALGSGLVQSAMPVAQVTLYMVVFSFMSIIGIIIGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHG 276
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: A0A662Y4D4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D4_9STRA) HSP 1 Score: 123 bits (308), Expect = 4.290e-29 Identity = 69/137 (50.36%), Postives = 97/137 (70.80%), Query Frame = 2 Query: 140 HSH-GMGSEGDG--VWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELASTEHG 538 HSH G G+ GD + V + L +ALS HSV+EGLG+GA++ A+ + FAI +HKGLAA+ALG+ L+QS + + L+++ FS M+ IGI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E HG Sbjct: 170 HSHLGGGAHGDAGSLAVAMVLFIALSFHSVLEGLGIGAQTQSAWGVFFAIVVHKGLAAFALGSGLVQSAMPAAHVMLYMVVFSFMSIIGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHGHG 306
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: D0NNK1_PHYIT (Zinc (Zn2)-Iron (Fe2) Permease (ZIP) family n=15 Tax=Phytophthora TaxID=4783 RepID=D0NNK1_PHYIT) HSP 1 Score: 122 bits (306), Expect = 6.890e-29 Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 107 GLRSNGGHRQAHSHGMGS----EGDGVWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELASTEHGWA-------------KMVSLLSGFSV 577 GL SN HSH G+ E + V + L +ALS HSV+EGLG+GA++ A+ + AI +HKGLAA+ALG+ L+QS + + L+++ FS M+ IGI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E HG K ++L++G+++ Sbjct: 148 GLASNVRRSSGHSHFGGAHKEPEAGSMAVAMVLFIALSFHSVLEGLGIGAQTETAWGVFMAIIMHKGLAAFALGSGLVQSAMPATHVMLYMVVFSFMSIIGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHGGGEDHGHHKNTMTLKKSIALVAGYAI 322
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: G5ABV8_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5ABV8_PHYSP) HSP 1 Score: 121 bits (304), Expect = 1.530e-28 Identity = 66/143 (46.15%), Postives = 95/143 (66.43%), Query Frame = 2 Query: 113 RSNGGHRQAHSHGMGSEGDGVWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELASTEHG 538 RS+ GH H ++ + V + L +ALS HSV+EGLG+GA++ A+ + AI +HKGLAA+ALG+ L+QS + + L++ FS M+ IGI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E HG Sbjct: 159 RSHAGHSHGPGHADEADAGSLAVAIVLFIALSFHSVLEGLGIGAQTETAWGVFMAIIMHKGLAAFALGSGLVQSAMPVTYVMLYMFVFSFMSIIGIVVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHG 301
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: K3WWH9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWH9_GLOUD) HSP 1 Score: 120 bits (300), Expect = 6.630e-28 Identity = 63/139 (45.32%), Postives = 97/139 (69.78%), Query Frame = 2 Query: 185 LALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELA-------STEHGWAKMVSLLSGFSV 577 + L +ALS HSV+EGLG+GA+++ A+ + AI +HKGLAA+ALG+ L+QS ++ + L+++ FS M+ IGI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E +H KM++L G+++ Sbjct: 199 IVLFIALSFHSVLEGLGIGAQTSSAWGVFLAIVVHKGLAAFALGSGLVQSSLKTSHVILYMVVFSFMSIIGIIIGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSGGSHKPQHTTQKMIALCLGYAI 337
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: A0A0P1AF82_PLAHL (Zinc-iron permease family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AF82_PLAHL) HSP 1 Score: 117 bits (294), Expect = 3.410e-27 Identity = 66/149 (44.30%), Postives = 98/149 (65.77%), Query Frame = 2 Query: 179 VRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELASTEHGWA---------------KMVSLLSGFSV 577 V L L +ALS HSV+EGLG+GA+ A+ + AI +HKGLAA+ALG+ L+QS + +T++++ FS M+ IGI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E HG + K V+L++G+++ Sbjct: 170 VALVLFIALSFHSVLEGLGIGAQKETAWGVFLAIIMHKGLAAFALGSGLIQSAMPVIHVTIYMVVFSFMSIIGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPHEFPQHSHGRSEDHTYEHHKSKETLRKSVALVAGYAI 318
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: A0A225VL60_9STRA (Zinc (Zn2)-Iron (Fe2) Permease (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VL60_9STRA) HSP 1 Score: 113 bits (282), Expect = 4.120e-27 Identity = 64/149 (42.95%), Postives = 86/149 (57.72%), Query Frame = 2 Query: 125 GHRQAHSHGMGSEGDGVWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGAVCVALAAGTFLYVALMEVLPPELASTEHGWAKMVSLLSGF 571 G + HSH G + L + +ALS HSVMEG+G+GA ST A+ +L AI HK LAA+AL L V KQL + FS MTP+GI G ++ AG VC A A GTFL+VA+ME++P EL + K+ +L +G+ Sbjct: 4 GKEEPHSHIHGIVKGNPILALVVFIALSFHSVMEGMGMGASSTAAWDILVAILAHKSLAAFALALEFLHHNVSRKQLLSSIAVFSLMTPMGILFGRLLVDSNHATPAGGVCAAFAGGTFLFVAIMEIIPQELQDPRYQVEKLSALFAGY 152
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Match: H3GY93_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY93_PHYRM) HSP 1 Score: 116 bits (291), Expect = 8.530e-27 Identity = 68/167 (40.72%), Postives = 103/167 (61.68%), Query Frame = 2 Query: 131 RQAHSHGMGSE---GDGVWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAAYALGASLLQSGVRGKQLTLFVLAFSAMTPIGIALGAVIERDGEDDSAGA-VCVALAAGTFLYVALMEVLPPELASTEHGW--------------AKMVSLLSGFSV 577 + HSHG + V + L +ALS HSV+EGLG+GA++ A+ + AI +HKGLAA+ALG+ L+QS + + L+++ FS M+ +GI +G +I D +DSA A +CVALA+GTF+YVA+MEV+P E HG K ++L++G++V Sbjct: 148 QSGHSHGXXXXXXXAGSLAVAMVLFIALSFHSVLEGLGIGAQTETAWGVFMAIIMHKGLAAFALGSGLVQSAMPVAHVMLYMVVFSFMSIVGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHSHGGDEGHGQQQKSKVTLQKSIALVTGYAV 314 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4825.12716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig4825.12716.1 >prot_L-elsbetiae_contig4825.12716.1 ID=prot_L-elsbetiae_contig4825.12716.1|Name=mRNA_L-elsbetiae_contig4825.12716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp MGSEGDGVWVRLALLLALSVHSVMEGLGVGAKSTKAYSLLFAIALHKGLAback to top mRNA from alignment at L-elsbetiae_contig4825:6379..8497- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig4825.12716.1 ID=mRNA_L-elsbetiae_contig4825.12716.1|Name=mRNA_L-elsbetiae_contig4825.12716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2119bp|location=Sequence derived from alignment at L-elsbetiae_contig4825:6379..8497- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig4825:6379..8497- >mRNA_L-elsbetiae_contig4825.12716.1 ID=mRNA_L-elsbetiae_contig4825.12716.1|Name=mRNA_L-elsbetiae_contig4825.12716.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig4825:6379..8497- (Laminarionema elsbetiae ELsaHSoW15)back to top |