mRNA_L-elsbetiae_contig48.12669.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A6H5JF24_9PHAE (G-patch domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF24_9PHAE) HSP 1 Score: 237 bits (605), Expect = 3.940e-68 Identity = 182/261 (69.73%), Postives = 194/261 (74.33%), Query Frame = 2 Query: 74 APRVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGDGT-TGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIASASAQAASACPSRARRVKSKDVKGFSAADLRAILGQAATTANPSIPSYPVIGGGXXXXXXXXXXXXXXXXXXXXXXXXXX-SKAAPADTP-HRPRTRSMDETVA-GEPSKL--GKRPRQQ 838 APRVGDT NQAWKNDKSKFGLKM+QKMGWTEGKGLGK+EDGVSEHVKVAKKSNNLGLGAT D+SGAAGWASAAVSFNGVLE LGKAYG G G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A +AQAAS+CPSRARRV+SKDVKGFSAA+LRAILGQAATTA+PS+PSYPV+ GG SK+ D P RPRTRSMDET EP + GKRPR Q Sbjct: 5 APRVGDTQNQAWKNDKSKFGLKMMQKMGWTEGKGLGKNEDGVSEHVKVAKKSNNLGLGATRDSSGAAGWASAAVSFNGVLETLGKAYGGGADVGGKAKMKGDKRTKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAMTAAQAASSCPSRARRVRSKDVKGFSAAELRAILGQAATTADPSLPSYPVVRGGCGTEGAAAAATEPKISKKKSSNKKSKGSKSTSLDAPPRRPRTRSMDETAPPAEPPAVVGGKRPRDQ 265
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: D7FQC4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC4_ECTSI) HSP 1 Score: 169 bits (428), Expect = 3.410e-44 Identity = 126/260 (48.46%), Postives = 137/260 (52.69%), Query Frame = 2 Query: 74 APRVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGDGTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIASASAQAASACPSRARRVKSKDVKGFSAADLRAILGQAATTANPSIPSYPVIGGGXXXXXXXXXXXXXXXXXXXXXXXXXX-SKAAPADTP-HRPRTRSMDETVA-GEPSKL--GKRPRQQ 838 APRVGDT NQAWKNDKSKFGLKM+QKMGWTEGKGLGK+EDGVSEHVKV+KKSNNLGLGATHD+SGAAGWASAA DVKGFSAA+LRAILGQAATTA+PS+PSYPV+ GG XXXXXXX SK+ D P RPRTRSMDET EP+ + GKRPR Q Sbjct: 5 APRVGDTQNQAWKNDKSKFGLKMMQKMGWTEGKGLGKNEDGVSEHVKVSKKSNNLGLGATHDSSGAAGWASAA---------------------------------------------------------------------------------------DVKGFSAAELRAILGQAATTADPSLPSYPVVRGGYGAEAAAAAATDPKISKXXXXXXXSKGSKSTTLDAPPRRPRTRSMDETAPLAEPAAIVGGKRPRDQ 177
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A835ZDF6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF6_9STRA) HSP 1 Score: 108 bits (269), Expect = 7.840e-23 Identity = 82/177 (46.33%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 92 TLNQAWKNDKSK-FGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGDGTTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIASASAQAASACPSRARRVKSKDVKGFSAADLRAILGQAATTAN 619 TLNQAW N ++ K+++KMGW+EGKGLGK EDG++ H++V ++ NLGLGA D G+AGW++ SF+ VL L +AY XXXXXXXXXXXXXXXXX A+A + CPSRARRVK+KD++ FS+ DL+AILG A A+ Sbjct: 25 TLNQAWANSRTDGIAYKLMRKMGWSEGKGLGKDEDGIASHIRVQRRDGNLGLGAAKDRDGSAGWSATTTSFSAVLATLNQAY---------------------------QPPKKDXXXXXXXXXXXXXXXXXKAAAAGISSGDVCPSRARRVKAKDIRTFSSTDLKAILGHAPAVAD 174
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A6V1RLJ9_HETAK (Hypothetical protein n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RLJ9_HETAK) HSP 1 Score: 98.2 bits (243), Expect = 3.650e-19 Identity = 49/97 (50.52%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 47 LAMATASVEAPRVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYG 337 +A + +V + D LN WKNDK+ FG +ML KMGW+EGKGLGK+EDG S H+ V+KK++ LGLG D G +GW+S+ SF VL L YG Sbjct: 1 MAASAVAVARSNLKDNLNSHWKNDKTGFGFRMLSKMGWSEGKGLGKNEDGQSSHIIVSKKTDALGLGCDKDTIGNSGWSSSIQSFTDVLAQLNAKYG 97
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A2R5GL57_9STRA (Protein PXR1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GL57_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.570e-16 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 89 DTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYG 337 DTLNQ W NDK+KFG KM+ KMGW++GKG GK+EDG + HVKV K++ LGLG D G + +FN VL +L +A+G Sbjct: 8 DTLNQRWANDKNKFGYKMMLKMGWSDGKGTGKNEDGRASHVKVEKRTETLGLGTEEDGVGNVAFQGQINNFNDVLRSLNQAHG 90
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: K3WMW5_GLOUD (G-patch domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMW5_GLOUD) HSP 1 Score: 87.0 bits (214), Expect = 7.960e-16 Identity = 44/87 (50.57%), Postives = 56/87 (64.37%), Query Frame = 2 Query: 80 RVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGD 340 ++G N AW D SKFG KML KMGW GKG+GK G + HVK+A++S NLG+G + + GW+S A SF VL+ L K YGD Sbjct: 25 QMGGMQNMAWAADTSKFGYKMLVKMGWAAGKGVGKDLQGQATHVKIARRSENLGVGCSLKQAEVQGWSSTATSFADVLKTLNKKYGD 111
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A662XRZ5_9STRA (G-patch domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XRZ5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.300e-15 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 83 VGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGDGTTG 352 VG N AW D SKFG KML KMGW+ GKG+GK G + HVK+A++S NLG+G + + GW++ A F VL+ L K+YG ++G Sbjct: 28 VGGLQNMAWAADTSKFGFKMLMKMGWSAGKGVGKDLQGQATHVKIARRSENLGVGCSLKQAEVQGWSNTAAGFADVLKTLNKSYGSKSSG 117
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A4D9CU62_9STRA (G-patch domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU62_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.670e-15 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 89 DTLNQAWKNDKSK-FGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYG 337 DTLNQ W + K K FG KM+ KMGW++G+GLGK G + HV VAKK +N GLG+ D +G AGW A+ +F+ VL L + YG Sbjct: 22 DTLNQHWVDGKKKNFGFKMMMKMGWSDGQGLGKELQGCATHVTVAKKVDNAGLGSVRDETGNAGWTEASATFDSVLSKLNETYG 105
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: A0A0P1AVK5_PLAHL (Pin2 terf1-interacting telomerase inhibitor 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVK5_PLAHL) HSP 1 Score: 86.3 bits (212), Expect = 2.200e-15 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 2 Query: 83 VGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAY 334 VG N AW +D SKFG KML KMGW+ GKG+GKH G + HVKVA++S NLG+G + + GWA A F VL AL +Y Sbjct: 28 VGGMQNMAWASDTSKFGFKMLVKMGWSAGKGVGKHLQGQATHVKVARRSENLGVGCSLKQAEVQGWAETAGGFADVLNALNNSY 111
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Match: G5A278_PHYSP (G-patch domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G5A278_PHYSP) HSP 1 Score: 85.5 bits (210), Expect = 3.110e-15 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 47 LAMATASVEAPRVGDTL-------NQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSEHVKVAKKSNNLGLGATHDASGAAGWASAAVSFNGVLEALGKAYGDGTTG 352 +A +++ VE G T+ N AW D SKFG KML KMGW+ GKG+GK+ G + HVK+A++S NLG+G + + GW+ A F VL+ L K+YG +G Sbjct: 6 VASSSSPVETDEAGKTMVAMGGMQNMAWAADTSKFGFKMLVKMGWSAGKGVGKNLQGQATHVKIARRSENLGVGCSLKQAEVQGWSETAGGFADVLKTLNKSYGGSKSG 114 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig48.12669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig48.12669.1 >prot_L-elsbetiae_contig48.12669.1 ID=prot_L-elsbetiae_contig48.12669.1|Name=mRNA_L-elsbetiae_contig48.12669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp MATASVEAPRVGDTLNQAWKNDKSKFGLKMLQKMGWTEGKGLGKHEDGVSback to top mRNA from alignment at L-elsbetiae_contig48:25973..28268+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig48.12669.1 ID=mRNA_L-elsbetiae_contig48.12669.1|Name=mRNA_L-elsbetiae_contig48.12669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2296bp|location=Sequence derived from alignment at L-elsbetiae_contig48:25973..28268+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig48:25973..28268+ >mRNA_L-elsbetiae_contig48.12669.1 ID=mRNA_L-elsbetiae_contig48.12669.1|Name=mRNA_L-elsbetiae_contig48.12669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2028bp|location=Sequence derived from alignment at L-elsbetiae_contig48:25973..28268+ (Laminarionema elsbetiae ELsaHSoW15)back to top |