mRNA_L-elsbetiae_contig2164.6628.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: D7FKC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC6_ECTSI) HSP 1 Score: 370 bits (949), Expect = 1.210e-122 Identity = 197/232 (84.91%), Postives = 216/232 (93.10%), Query Frame = 1 Query: 1 VAELKAQEIKNSEMMVDELRELSSKAESKIMEVEAARRIEEADRIAGENVHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNAERLKSLDGQA 696 VAELKAQ++ SE +V ELRELS+KAESKIMEVEAAR EEA+R+A E VHRVTHATLSLAERF +SAP+K+ELDNLRRLAGGDPLLEAAA SIP DAAA+GIPT QLKQRFG VKAECRRAALVPEQAGNGM+GHLVASALAKITFAPKGMVEGD AEGVLARADYLLEAGEL+SAVGEL+KL+GLPADVA+DWLKDAKTRLTADEALRVIRCHAS+LNAE L++LDG+A Sbjct: 380 VAELKAQDLDRSEKVVAELRELSNKAESKIMEVEAARNAEEAERLASEKVHRVTHATLSLAERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPADAAAKGIPTVSQLKQRFGIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADYLLEAGELQSAVGELDKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHASILNAEHLEALDGKA 611
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A6H5L3V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V0_9PHAE) HSP 1 Score: 359 bits (921), Expect = 8.820e-116 Identity = 195/236 (82.63%), Postives = 213/236 (90.25%), Query Frame = 1 Query: 1 VAELKAQEIKNSEMMVDELRELSSKAESKIMEVEAARRIEEADRIAGENVHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQR----FGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNAERLKSLDGQA 696 VAELKAQ++ SE +V ELRELS KAESKIMEVEAAR EEA+R+A E VHRVTHATLSL ERF +SAP+K+ELDNLRRLAGGDPLLEAAA SIP DAAARGIPT QLKQR FG VKAECRRAALVP+QAGNGM+GHLVASALAKITFAPKGMVEGD AE VLARAD+LLEAGEL+SAVGELEKL+GLPADVA+DWLKDAKTRLTADEALRVIRCHA++LNAE LK+LDG+A Sbjct: 615 VAELKAQDLDRSEKVVAELRELSHKAESKIMEVEAARNAEEAERLASEKVHRVTHATLSLTERFTSSAPIKKELDNLRRLAGGDPLLEAAAESIPADAAARGIPTVSQLKQRHAILFGIVKAECRRAALVPQQAGNGMMGHLVASALAKITFAPKGMVEGDEAEAVLARADHLLEAGELQSAVGELEKLHGLPADVAMDWLKDAKTRLTADEALRVIRCHAAILNAEHLKALDGKA 850
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A1V9YGU2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGU2_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.820e-37 Identity = 83/173 (47.98%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 148 VHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNA 666 VH+V+ A L+L +R +AP+ +E+ L A GD LLEAA S+ G P+ QL+ RFG V+ RRAALVPE+A GMVGHL A AL + P G ++GD AE V +RADY L AG+LE+ V EL+KL GLP +V DW+ AK+RL ++ +V++ H SLL A Sbjct: 470 VHKVSVAALALTDRIEAAAPLHKEIRALAAAAAGDNLLEAAVKSMAPHV--EGAPSVAQLQDRFGYVRNAGRRAALVPEEA-KGMVGHLFAGALLWLLIPPGGPIKGDDAEAVFSRADYALRAGDLETTVAELDKLQGLPKEVVADWVAAAKSRLAIEQTSKVVKAHVSLLAA 639
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A7S3Y895_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y895_HETAK) HSP 1 Score: 137 bits (345), Expect = 5.410e-36 Identity = 83/178 (46.63%), Postives = 109/178 (61.24%), Query Frame = 1 Query: 148 VHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELE----KLNGLPADVAV--DWLKDAKTRLTADEALRVIRCHASLLN 663 VH+++ A L+L +R TS PV EL LR A GDPL+ A A++ + +G+PT QLK RF V RRAALVPE AG G G L+ S LA +T P+G V+G GA+ LAR + L AG+L +AV E E G PA V DW+KDAK RL A++AL+++ H +LLN Sbjct: 93 VHQLSAAALALGKRLETSEPVGAELKLLREAAQGDPLVATAVAALGGEGK-KGVPTAAQLKARFAGVHEAARRAALVPEGAGGGAWGQLLGSLLALVTIRPQGDVQGAGADEALARVSHRLAAGDLRAAVAEAEGPALAARGNPAVALVVRDWIKDAKLRLQAEQALKILNAHTALLN 269
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A5D6XY43_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY43_9STRA) HSP 1 Score: 135 bits (339), Expect = 9.490e-33 Identity = 72/173 (41.62%), Postives = 109/173 (63.01%), Query Frame = 1 Query: 148 VHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNA 666 VH+ + A L+L++R +AP++ E+ LR A D +E A ++P G P+ QL++RF VK RAAL P AG +VG L SAL+ + P G +EGD + V +RADY L+AG++ESA+GEL+ L+G+PA VA DW+ A++RL ++ +V++ H +LL A Sbjct: 526 VHKTSVAALALSDRIEAAAPLRDEIRALRDAARSDEFIEVALKTLPTHVIDAGAPSVSQLQERFVVVKKVAHRAALAPADAG--LVGQLFGSALSLLMIPPGGPIEGDDTDAVFSRADYALKAGDIESALGELKALSGVPAQVAQDWVAAAESRLAVEQTAKVVKAHVALLAA 696
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A835YW45_9STRA (Mitochondrial inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW45_9STRA) HSP 1 Score: 133 bits (335), Expect = 3.070e-32 Identity = 78/182 (42.86%), Postives = 103/182 (56.59%), Query Frame = 1 Query: 151 HRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNAERLKSLDGQA 696 HR+T A L+L R SAP EL LR AG D G+PT QL++RF V+ E RAALVP G G++G V + L+ T GMVEG A+ VLARA+ LL+ G+L SAV EL +L GL A A DW++DA+ RL AD+A+R +RC S L+ +D ++ Sbjct: 493 HRLTAAALALEARLRISAPAPAELAALRSAAGADAXXXXXXXXXXXXXXXAGVPTAEQLRRRFARVRGEAARAALVPGGDGAGVMGQAVGALLSVFTLPRHGMVEGSSADDVLARAECLLDGGDLRSAVKELSRLEGLAAVTARDWVQDAEARLRADDAMRALRCRCSTWQYWGLRRVDEES 674
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A484E8U9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8U9_BRELC) HSP 1 Score: 129 bits (324), Expect = 1.060e-30 Identity = 66/173 (38.15%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 148 VHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNA 666 VH+ + A L+L++R +AP++ E+ LR+ A DP +E A S+ ++A G P+ QL++RF VK+ R AL+PE +G+VG +AL+ + P G +EG+ + V +RAD+ ++AG LE AV E++ L+G+PA ++ DW+ A++RL ++ +VI+ H +LL A Sbjct: 541 VHKTSMAALALSDRVEAAAPLQSEVRALRKAAKSDPFIETAVNSLSQEAIEIGAPSVGQLQERFKAVKSVGHRTALIPEN--SGIVGQAFGTALSLLMIPPGGPIEGNDVDAVFSRADFAVQAGNLEKAVDEMKALSGIPAQISQDWITAAESRLAVEQTAKVIKAHVALLAA 711
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A7R9YBK3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK3_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.610e-27 Identity = 70/177 (39.55%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 148 VHRVTHATLSLAERFATSAPVKRELDNLRRLAGG-DPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNAERL 675 VH++T A LSLA++F T+ P +E + L RL+ P + + +P+DA +GIPT QL+ RF VK R + VP + G G +VAS +T PKG+V+G G E LARA Y ++ GEL A E+ L G DWL DA++R+ AD+ I A+ LN +L Sbjct: 204 VHKITAAALSLAQKFETNEPFLQEANTLARLSSSAGPEISSLIEELPQDAMKKGIPTLPQLQYRFDRVKRAARHESNVPPEMP-GFGGQIVASVTTFLTVPPKGLVKGSGPEERLARAAYFVQTGELAKAASEVSGLTGRAKAAVQDWLNDAESRIKADKVSAAITLQAASLNRRQL 379
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A2D4C9R1_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9R1_PYTIN) HSP 1 Score: 116 bits (290), Expect = 4.330e-26 Identity = 67/173 (38.73%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 148 VHRVTHATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASLLNA 666 VH+ + A L+L++R +AP++ E + E+ G P+ QL++RF TVKA RRAA+VP A +G++G L AL+ + +P G ++GD AE V +RADY L+AG++E AV E++ L+GLPA+V+ DW+ A++RL ++ +V++ H SLL A Sbjct: 812 VHKASMAALALSDRIEAAAPLRTE-------------------RVIEE----GAPSVSQLQERFKTVKAVGRRAAMVP--ADSGLLGQLFGGALSYLIISPGGPIQGDDAEAVFSRADYALKAGDIEQAVQEMKGLSGLPAEVSKDWVAAAESRLAVEQTAKVVKAHISLLAA 959
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Match: A0A1S9RHX6_PENBI (MICOS complex subunit MIC60 n=4 Tax=Penicillium TaxID=5073 RepID=A0A1S9RHX6_PENBI) HSP 1 Score: 114 bits (284), Expect = 2.220e-25 Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 166 ATLSLAERFATSAPVKRELDNLRRLAGGDPLLEAAAASIPEDAAARGIPTPMQLKQRFGTVKAECRRAALVPEQAGNGMVGHLVASALAKITFAPKGMVEGDGAEGVLARADYLLEAGELESAVGELEKLNGLPADVAVDWLKDAKTRLTADEALRVIRCHASL 657 A S+ ER +S P REL ++ LA GDP+++AA ASI A RGIP+P Q+ +RF V E R+A+L+PE AG + H + L+K+ F G+ +G+ E +L R + LLE G L++A E+ L G ++ DWL D + L +AL VI A L Sbjct: 461 AVRSVVERSESSRPFVRELVAVKELAAGDPVVDAAIASINPTAYQRGIPSPTQIIERFRRVAGEVRKASLLPEDAG--IASHAASLVLSKVMFKKDGLADGNDVESILLRTENLLEEGNLDAAAREMNTLQGWAKILSKDWLGDVRRVLEVKQALEVIETEARL 622 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2164.6628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2164.6628.1 >prot_L-elsbetiae_contig2164.6628.1 ID=prot_L-elsbetiae_contig2164.6628.1|Name=mRNA_L-elsbetiae_contig2164.6628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp VAELKAQEIKNSEMMVDELRELSSKAESKIMEVEAARRIEEADRIAGENVback to top mRNA from alignment at L-elsbetiae_contig2164:18547..21559- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2164.6628.1 ID=mRNA_L-elsbetiae_contig2164.6628.1|Name=mRNA_L-elsbetiae_contig2164.6628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3013bp|location=Sequence derived from alignment at L-elsbetiae_contig2164:18547..21559- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2164:18547..21559- >mRNA_L-elsbetiae_contig2164.6628.1 ID=mRNA_L-elsbetiae_contig2164.6628.1|Name=mRNA_L-elsbetiae_contig2164.6628.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1398bp|location=Sequence derived from alignment at L-elsbetiae_contig2164:18547..21559- (Laminarionema elsbetiae ELsaHSoW15)back to top |