mRNA_L-elsbetiae_contig21620.6622.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: D8LLZ5_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ5_ECTSI) HSP 1 Score: 138 bits (348), Expect = 5.800e-39 Identity = 64/73 (87.67%), Postives = 72/73 (98.63%), Query Frame = 1 Query: 1 VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQ 219 VI +AERYF+VL+ENA++D+IVVIKIYAGFCRACKAFDRKFRLLSLDF+EQGANVKFFEMDWM+TRDLCKSLQ Sbjct: 132 VISTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQ 204
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A6H5JEA9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEA9_9PHAE) HSP 1 Score: 140 bits (354), Expect = 8.720e-38 Identity = 65/73 (89.04%), Postives = 73/73 (100.00%), Query Frame = 1 Query: 1 VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQ 219 VID+AERYF+VL+ENA++D+IVVIKIYAGFCRACKAFDRKFRLLSLDF+EQGANVKFFEMDWM+TRDLCKSLQ Sbjct: 405 VIDTAERYFEVLRENAQKDQIVVIKIYAGFCRACKAFDRKFRLLSLDFQEQGANVKFFEMDWMQTRDLCKSLQ 477
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A836C9F2_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F2_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.880e-10 Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 1 Query: 25 FQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 F+ E + D++V+IK Y +CRACKAFD K+R L L+ E+Q A F+E+D +D+ + L + Sbjct: 4 FEAAVEASHGDRLVIIKAYVPWCRACKAFDLKYRRLGLELEQQDAPASFYEIDVFAVKDVKQLLDI 69
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR) HSP 1 Score: 57.8 bits (138), Expect = 1.620e-8 Identity = 28/74 (37.84%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 1 VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 +I E+Y QVL+E++ D +VV+K++A +CR+C+A K + +F +NV+FF+MD+ + ++LC L V Sbjct: 65 LIHGVEQYLQVLRESS--DSLVVLKVFAPWCRSCRALTPKVNRFAREF----SNVRFFKMDYEQNKELCHRLGV 132
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A7S4A7N2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7N2_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 2.470e-7 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 55 DKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 DK+V IK YAG+CRACK +F L+ +F E+ A F+E+++ +DLC+ L + Sbjct: 131 DKVVAIKFYAGWCRACKTIAPRFERLAKEFGEEAA---FYEIEFSANKDLCRRLDI 183
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA) HSP 1 Score: 54.7 bits (130), Expect = 2.710e-7 Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 4 IDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 ID + Y +++E E+++VVIK +A +CRACKA KF ++ D+ + V+F E+ + + LCKSL + Sbjct: 58 IDDTDAYEALIEEATRENRVVVIKFFASWCRACKAMSPKFTRIADDWPD----VEFHEIMFDNNKKLCKSLGI 126
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: F0YB20_AURAN (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB20_AURAN) HSP 1 Score: 52.8 bits (125), Expect = 3.160e-7 Identity = 24/73 (32.88%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 4 IDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 ID E + + + +D++V +K YA +CRACK+ +F L+ +F G V+FFE+++ ++LC+ L + Sbjct: 4 IDGDEAFLAAM-QYCTDDRLVAVKFYASWCRACKSIAPRFERLAKEFA--GDEVQFFEIEFAANKELCRRLNI 73
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A7S4C0Q1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0Q1_CHRCT) HSP 1 Score: 52.0 bits (123), Expect = 2.870e-6 Identity = 25/73 (34.25%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 4 IDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 +D + Y ++E E+++VVIK+YA +CRACKA K++ ++ D+ + V+F ++ + ++LCKSL + Sbjct: 67 LDDEKAYNAKIEEAKRENQVVVIKVYASWCRACKAMAPKYQRIAEDWPD----VEFCDILFDNNKNLCKSLGI 135
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A7S2GHN9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GHN9_9EUKA) HSP 1 Score: 51.6 bits (122), Expect = 5.590e-6 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 1 VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 +I Y + K A E++ V IKIYA +CRACKA K+ ++ D E ++V+F+E+ + + LCKSL + Sbjct: 67 LIPDTPAYKDLYKAAAREERTVCIKIYATWCRACKAMGPKYERIAKDPEY--SHVEFYEIAFDDNKALCKSLGI 138
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Match: A0A7S3TUC7_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3TUC7_9SPIT) HSP 1 Score: 50.4 bits (119), Expect = 6.330e-6 Identity = 26/74 (35.14%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 1 VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEQGANVKFFEMDWMKTRDLCKSLQV 222 ++ AE Y +++ E+++VVIK YA +CRACKA K+ ++ D+ E ++F EM + + LCK L + Sbjct: 18 LLAGAEEYEAKIEQAKAENRVVVIKFYASWCRACKAMGPKYVKVAQDWPE----LEFCEMLYDNNKKLCKELGI 87 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21620.6622.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21620.6622.1 >prot_L-elsbetiae_contig21620.6622.1 ID=prot_L-elsbetiae_contig21620.6622.1|Name=mRNA_L-elsbetiae_contig21620.6622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=74bp VIDSAERYFQVLKENAEEDKIVVIKIYAGFCRACKAFDRKFRLLSLDFEEback to top mRNA from alignment at L-elsbetiae_contig21620:828..1049- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21620.6622.1 ID=mRNA_L-elsbetiae_contig21620.6622.1|Name=mRNA_L-elsbetiae_contig21620.6622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=222bp|location=Sequence derived from alignment at L-elsbetiae_contig21620:828..1049- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21620:828..1049- >mRNA_L-elsbetiae_contig21620.6622.1 ID=mRNA_L-elsbetiae_contig21620.6622.1|Name=mRNA_L-elsbetiae_contig21620.6622.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=444bp|location=Sequence derived from alignment at L-elsbetiae_contig21620:828..1049- (Laminarionema elsbetiae ELsaHSoW15)back to top |