mRNA_L-elsbetiae_contig21619.6620.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5JRL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL1_9PHAE) HSP 1 Score: 142 bits (357), Expect = 5.600e-37 Identity = 86/214 (40.19%), Postives = 120/214 (56.07%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKN-NGQPLSP*TDFVLAFEYVPAGAGNRRQPDTAMR----------RPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQVWAHKYKMARPGE--GYGKYLLNEHHHSIGQYSFI 606 +GG+A+AA + GP+DDW LG G G D+EI+ K P G +P VD LT+ KI+ FF GN+ + +G+P P T +VLA++YV G GN R PD+ R RP+V+PV AIRR VH+YH CP +D G ++ G+S G + +R VW H++++A PG GY +YLLNE HHS Q +F+ Sbjct: 216 RGGDAKAAARVGPRDDWALGQGQGNDVEIFN-KPPPTGDDVSPSVDDLTMSKIIYFFDHKGNKNSFSGEPR-PSTWWVLAYDYVGIGNGNERVPDSVTRHPTLSLQGRGRPKVYPVQAIRRQVHMYHQCPQH----SDVGSSTSQI------CGESQ------------GPYSGGRDR-VWHHRFRLALPGSRNGYDRYLLNEVHHSTNQDTFV 404
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5JZ87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ87_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.270e-35 Identity = 79/202 (39.11%), Postives = 109/202 (53.96%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT-------AMR---RPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQVWAHKYKMARPGE--GYGKYLLNE 573 KGG+ +AA + GP DDW LG G G+D++I+ I P +G P D+LT+ KI+ FF GN+ + P T +VLA++YV G GN R PD+ ++R RP+V+PV AIRR VH+YH CP +G D G E ++L CG + +VW K+++A PG GY KYLLNE Sbjct: 15 KGGDVKAAARPGPPDDWALGQGQGDDVKIFNIPPPTGDHGPPP-ADQLTLSKIIYFFLHRGNKNSLSSEPPPFTWWVLAYDYVGVGHGNERVPDSITGHPTLSLRGRGRPKVYPVHAIRRQVHMYHQCP--------QGQD----GAEGSRL---------------CGETKGAGRDRVWRLKFRLALPGSSNGYDKYLLNE 188
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5K6P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P7_9PHAE) HSP 1 Score: 124 bits (310), Expect = 7.960e-32 Identity = 76/202 (37.62%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRR-------QPDTAMR---RPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQVWAHKYKMARPGE--GYGKYLLNE 573 KGG+ +A+ + GP DDW LG G +D+EI+ P +G P D+LT+ KI+ FF GN+ + SP T +VLA++YV G GN R P ++R RP+V+PV AIRR V YH CP +G D G E ++L G + +VW HK+++A PG GY KYLLNE Sbjct: 2 KGGDVKASARPGPPDDWALGQGQADDVEIFNKPPPTGDHGPPP-ADQLTLSKIIYFFRQRGNKNSLSSEPSPFTWWVLAYDYVGVGHGNERVSDSITGHPTLSLRGRGRPKVYPVHAIRRQVQTYHQCP--------QGQD----GAEGSRLR---------------GKTQGAGRDRVWRHKFRLALPGSSNGYDKYLLNE 175
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5JRJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ8_9PHAE) HSP 1 Score: 122 bits (306), Expect = 4.740e-31 Identity = 78/216 (36.11%), Postives = 107/216 (49.54%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT----------AMRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQ----VWAHKYKMARPGE-GYGKYLLNEHHHSIGQYSFI 606 KGG+ ++A +AGP+D+W LGSG G+++E++K P G A D LT+ K++ FF GNR G P T +VL +EY N R PD+ A RP V+PVSAI R VHLYH C L+ G++ + CG+VT + W H+++ A PG G KYLLN HHSI Q +F+ Sbjct: 44 KGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLLPMPAAGGADPTD-LTLVKVLYFFRHKGNRPLMGGNPPPLTWWVLGYEYTGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYRQVHLYHAC-------------------SLSGEGETGSSHV-------CGVVTGGEGSGRGAGAWRHRFRQATPGTTGCDKYLLNGCHHSINQDTFV 232
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5KNJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ3_9PHAE) HSP 1 Score: 126 bits (317), Expect = 5.180e-31 Identity = 79/216 (36.57%), Postives = 108/216 (50.00%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT----------AMRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQ----VWAHKYKMARPGE-GYGKYLLNEHHHSIGQYSFI 606 KGG+ ++A +AGP+D+W LGSG G+++E++K P G A D LT+ K++ FF NR G P T +VL +EY N R PD+ A RP V+PVSAI R VHLYH C L+ G++ + CG+VT + W H+++ A PG GY KYLLNE HHSI Q +F+ Sbjct: 239 KGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTD-LTLVKVLYFFRHKANRPLMGGNPPPLTWWVLGYEYTGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYRQVHLYHAC-------------------SLSGEGETGSSHV-------CGVVTGGEGSGRGAGAWRHRFRQATPGTTGYDKYLLNECHHSINQDTFV 427
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5KKN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN3_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.780e-30 Identity = 78/216 (36.11%), Postives = 106/216 (49.07%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT----------AMRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQ----VWAHKYKMARPGE-GYGKYLLNEHHHSIGQYSFI 606 KGG+ ++A +AGP+D+W LGSG G+++E++K P G A D LT+ K++ FF GNR G P VL +EY N R PD+ A RP V+PVSAI VHLYH C L+ G++ + CG+VT + W H+++ A PG GY KYLLNE HHSI Q +F+ Sbjct: 108 KGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTD-LTLVKVLYFFRHKGNRPLMGGNPPPLMWRVLGYEYTGVAHANDRVPDSITGHPTLNVRARGRPAVYPVSAIYWPVHLYHAC-------------------SLSGEGETGSSHV-------CGVVTGGEGSGRGAGAWRHRFRQATPGTTGYDKYLLNECHHSINQDTFV 296
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5K0J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J4_9PHAE) HSP 1 Score: 120 bits (301), Expect = 6.030e-28 Identity = 77/216 (35.65%), Postives = 106/216 (49.07%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT----------AMRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQ----VWAHKYKMARPGE-GYGKYLLNEHHHSIGQYSFI 606 KGG+ ++A +AGP+D+W LGSG G+++E++K P G A D LT+ K++ FF NR G P T +VL +EY N R PD+ A RP V+PVSAI VHLYH C L+ G++ + CG+VT + W H+++ A PG G KYLLNE HHSI Q +F+ Sbjct: 1091 KGGDVKSAAQAGPRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTD-LTLVKVLYFFRHKANRPLMGGNPPPLTWWVLGYEYTGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYGQVHLYHAC-------------------SLSGEGETGSSHV-------CGVVTGGEGSGRGAGAWRHRFRQATPGTTGCDKYLLNECHHSINQDTFV 1279
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.040e-27 Identity = 80/215 (37.21%), Postives = 112/215 (52.09%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDK--LTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDTAMR----------RPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMD-IDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQVWAHKYKMARPG-EGYGKYLLNEHHHSIGQYSFI 606 KGG+ ++A + GP+DDW LGSG G+++E+ + +P+ G+A VD L++ K++ FF GN G P T +VL ++Y GN R PD+ RP V+P AI R VHLYH CP R N+ G D + KE +G SS R+VW H ++ A PG +GY +YL+NE HHSI Q +FI Sbjct: 635 KGGDVKSAAQPGPRDDWALGSGGGDNVEVHQ--QPST-MGEAGRVDPRDLSLVKVLYFFRHQGNPPLMGGAPPPLTWWVLGYDYTGVRHGNDRAPDSVTGHPTLQLRGRGRPVVYPADAIHRQVHLYHACPLR----NEHGADDSSHVCKEEVVVGGSS------------------GRRRVWRHYFREATPGTDGYDRYLVNECHHSITQDTFI 824
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5JYX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX6_9PHAE) HSP 1 Score: 119 bits (298), Expect = 1.500e-27 Identity = 76/212 (35.85%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT----------AMRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTASDERQ----VWAHKYKMARPGE-GYGKYLLNEHHHSIGQ 594 KGG+ ++A +AGP+D+W LGSG G+++E++K P G A D L + +I+ FF GNR G P T +VL ++Y N R PD+ A RP V+PVSAI R VHLYH C L+ G++ + CG+VT + W H+++ A PG GY KY+LNE HHSI Q Sbjct: 949 KGGDVKSAAQAGPRDEWALGSGGGDNVEMYKQLSPMPAAGRADPTD-LALVEILYFFRHEGNRPVMGGNPPPLTWWVLGYDYNGVAHANDRVPDSITGHPTLNLRARGRPAVYPVSAIYRQVHLYHAC-------------------SLSGEGEAGSSHV-------CGVVTGGEGSGHGAGAWRHRFRQATPGTTGYDKYILNECHHSINQ 1133
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 117 bits (292), Expect = 9.750e-27 Identity = 76/214 (35.51%), Postives = 101/214 (47.20%), Query Frame = 1 Query: 4 KGGNARAAGKAGPKDDWVLGSGAGEDIEIWKIKEPADGYGDAPDVDKLTIGKIVSFFTPCGNRKNNGQPLSP*TDFVLAFEYVPAGAGNRRQPDT----------AMRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSPARALLPATWTCGIVTA--SDERQVWAHKYKMARPGE-GYGKYLLNEHHHSIGQYSFI 606 KGG+ ++ + GP+D+W LGSG G+++E+ K G A D L + K++ FF GNR G P T +VL +EY G N R D+ A RP V+PVSAI R VHLYH CP P D G + CG+ S VW H+++ A PG GY +YL NE HHSI Q +F+ Sbjct: 1196 KGGDVKSTSQPGPRDEWALGSGGGDNVEVHKQASAWAEVGRADPRD-LNLVKVLYFFRHKGNRPLMGGHPPPLTWWVLGYEYTGIGHANDRVTDSVTGHPTLQLRARGRPEVYPVSAIYRQVHLYHACPLNGDPETD--------GSQF------------------CGVAGGGGSSHGGVWRHRFRQATPGTAGYDRYLYNECHHSINQDTFV 1382 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21619.6620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21619.6620.1 >prot_L-elsbetiae_contig21619.6620.1 ID=prot_L-elsbetiae_contig21619.6620.1|Name=mRNA_L-elsbetiae_contig21619.6620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=106bp MRRPRVFPVSAIRRHVHLYHLCPARLHPVNDKGMDIDEMGKELAKLGKSSback to top mRNA from alignment at L-elsbetiae_contig21619:1639..2247- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21619.6620.1 ID=mRNA_L-elsbetiae_contig21619.6620.1|Name=mRNA_L-elsbetiae_contig21619.6620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=609bp|location=Sequence derived from alignment at L-elsbetiae_contig21619:1639..2247- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21619:1639..2247- >mRNA_L-elsbetiae_contig21619.6620.1 ID=mRNA_L-elsbetiae_contig21619.6620.1|Name=mRNA_L-elsbetiae_contig21619.6620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=636bp|location=Sequence derived from alignment at L-elsbetiae_contig21619:1639..2247- (Laminarionema elsbetiae ELsaHSoW15)back to top |