mRNA_L-elsbetiae_contig21612.6617.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A6H5LJB3_9PHAE (Hist_deacetyl domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LJB3_9PHAE) HSP 1 Score: 252 bits (643), Expect = 4.630e-81 Identity = 118/146 (80.82%), Postives = 129/146 (88.36%), Query Frame = 1 Query: 1 SLGGTVHQDFPPVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 SLGG VH+D PP+VYHERYSA PWP KHSFPMSKF DLAELLA +GPLG GP+AM AFRP+D+PPH+W EAVHDP YYRAF+GGTLD K +RRIGLPY+E LVDRTLLEVSGTVL ARLALK+GLACNLAGGTHHAHKGFGSG Sbjct: 40 SLGGIVHKDLPPLVYHERYSADPWPPKHSFPMSKFRDLAELLADTNGPLGDEGPVAMKGAFRPMDRPPHKWFEAVHDPLYYRAFVGGTLDGKVIRRIGLPYTEPLVDRTLLEVSGTVLAARLALKFGLACNLAGGTHHAHKGFGSG 185
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A6V1V0D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V0D3_HETAK) HSP 1 Score: 146 bits (369), Expect = 7.090e-40 Identity = 77/136 (56.62%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 31 PPVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 PP VYH YS PWPS H FPM KF L E+L K + F PLD PPHEW VHD YY+ FL TL RRIG LV RT LEV+GT+LTA+LAL++GLACNLAGGTHHAHKG+GSG Sbjct: 62 PPFVYHPEYSC-PWPSNHRFPMWKFKGLFEVLCKDHI-------IREGEYFVPLDDPPHEWFTLVHDERYYKGFLDNTLTNDEWRRIGFRPGPGLVRRTRLEVAGTLLTAQLALQHGLACNLAGGTHHAHKGYGSG 189
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A8J6CHI7_DIALT (Hist_deacetyl domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHI7_DIALT) HSP 1 Score: 145 bits (365), Expect = 7.090e-40 Identity = 75/135 (55.56%), Postives = 88/135 (65.19%), Query Frame = 1 Query: 34 PVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 P+VYH +YS PWP+ H F MSKF DL + L LG G P+D PP EW AVHD +YY F GTL A+RRIG +S LV+RT LE +GTVL ARLAL++GLACNL GGTHHAH+ FGSG Sbjct: 9 PLVYHAKYSFEPWPAAHRFRMSKFVDLHDHL------LGR-GIATKEQLHAPIDDPPDEWFTAVHDADYYFGFTDGTLPAPAMRRIGFEWSAQLVERTRLECAGTVLAARLALEHGLACNLGGGTHHAHRDFGSG 136
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A2T1FDA4_9CYAN (Histone deacetylase n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A2T1FDA4_9CYAN) HSP 1 Score: 144 bits (364), Expect = 8.880e-40 Identity = 75/135 (55.56%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 34 PVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 P++YHE Y AP P H FPM+KF L ++L DG +A S F + PP EW+E VHD Y +A+ GTLD KA+RRIGLP+S +L +RT + V+GTVLTA+LAL+YGLACN AGGTHHA GFGSG Sbjct: 4 PIIYHEDY-VAPLPPGHRFPMAKFGMLYQMLIA-DG-------VADRSQFHAPELPPQEWIELVHDRHYVQAYCNGTLDAKAIRRIGLPWSRALANRTFIAVAGTVLTAKLALEYGLACNTAGGTHHAFPGFGSG 129
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A7S4BJF9_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJF9_CHRCT) HSP 1 Score: 143 bits (360), Expect = 9.090e-40 Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = 1 Query: 4 LGGTVHQDFPPVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYS---ESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 L G P+VYH RYSA PWP H FPM KFSDL + + LA ++++ + P H W EAVHDP YYR+F+ G L E+ RRIG +L+DRT LE +GTVLTA+LAL++GLACNLAGGTHHAH+ FGSG Sbjct: 2 LRGVAAMQALPLVYHARYSA-PWPRTHRFPMWKFSDLHAFIKRTG--------LASAASWHEPELPDHAWFEAVHDPVYYRSFIEGRLGEEQERRIGFRNEMRKPALIDRTRLECAGTVLTAQLALEHGLACNLAGGTHHAHRSFGSG 140
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A7S4BJF7_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BJF7_CHRCT) HSP 1 Score: 143 bits (360), Expect = 4.440e-39 Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = 1 Query: 4 LGGTVHQDFPPVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYS---ESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 L G P+VYH RYSA PWP H FPM KFSDL + + LA ++++ + P H W EAVHDP YYR+F+ G L E+ RRIG +L+DRT LE +GTVLTA+LAL++GLACNLAGGTHHAH+ FGSG Sbjct: 2 LRGVAAMQALPLVYHARYSA-PWPRTHRFPMWKFSDLHAFIKRTG--------LASAASWHEPELPDHAWFEAVHDPVYYRSFIEGRLGEEQERRIGFRNEMRKPALIDRTRLECAGTVLTAQLALEHGLACNLAGGTHHAHRSFGSG 140
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A7S2IEI5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IEI5_9EUKA) HSP 1 Score: 139 bits (350), Expect = 7.860e-39 Identity = 77/138 (55.80%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 34 PVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPY---SESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 P+VYH YS PWP H FPM KF+ L L +G A P ++ RPL+ PPH W EAVHD EYYRAFL G L + RRIG L+ RTLLE SGTV T +LAL++GLA NLAGGTHHAH+GFGSG Sbjct: 1 PLVYHPPYSC-PWPPAHRFPMWKFAGLYAHLTS----IGIATP---ANIHRPLNDPPHAWFEAVHDREYYRAFLAGQLGSEQERRIGFKEHAREAPLIQRTLLECSGTVRTVQLALEHGLAANLAGGTHHAHRGFGSG 130
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: A0A2G4EXA8_9CYAN (Histone deacetylase n=5 Tax=Microcoleaceae TaxID=1892252 RepID=A0A2G4EXA8_9CYAN) HSP 1 Score: 139 bits (351), Expect = 7.760e-38 Identity = 74/135 (54.81%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 34 PVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 P++YHE Y AP PS H FPM+KF L E+L DG +A + F + PP EW++ VHD Y +A+ GTLD KA RRIGLP+S +LV+RT + SGTVLTA+LAL+YGLACN AGGTHHA +GSG Sbjct: 4 PIIYHEDY-VAPLPSGHRFPMAKFRLLYEMLLA-DG-------VASHAQFHAPELPPSEWIQLVHDDSYIQAYCNGTLDAKAQRRIGLPWSPALVNRTCIASSGTVLTAKLALEYGLACNTAGGTHHAFPNYGSG 129
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: UPI001F41699D (histone deacetylase n=1 Tax=Tychonema sp. BBK16 TaxID=2699888 RepID=UPI001F41699D) HSP 1 Score: 135 bits (341), Expect = 1.140e-37 Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 1 Query: 34 PVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 P++YHE Y AP PS H FPM+KF L E+L DG +A + F + PP EW+E VHD Y +A+ GTLD KA RRIGLP+S +LV+RT + SGTVLTA+LAL+ GLACN AGGTHHA +GSG Sbjct: 4 PIIYHEDY-VAPLPSGHRFPMAKFRLLYEMLLA-DG-------VASHTQFHAPELPPSEWIELVHDDYYIQAYCNGTLDAKAQRRIGLPWSPALVNRTRIASSGTVLTAKLALECGLACNTAGGTHHAFPDYGSG 129
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Match: UPI0019A7BA7B (Histone deacetylase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=UPI0019A7BA7B) HSP 1 Score: 139 bits (349), Expect = 1.540e-37 Identity = 77/135 (57.04%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 34 PVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGAAGPLAMSSAFRPLDQPPHEWLEAVHDPEYYRAFLGGTLDEKAVRRIGLPYSESLVDRTLLEVSGTVLTARLALKYGLACNLAGGTHHAHKGFGSG 438 P+VYH Y AP P H FPMSKF L E L DG + A S ++ P EWLE VH PEY RA+ GTLD KA RRIGLP+S +LV+RT + V G+VLTARLAL++GLACN AGGTHHA G+GSG Sbjct: 4 PIVYHPEY-VAPLPEGHRFPMSKFRLLYERLLT-DGVVDA-------SQIHTPERSPQEWLELVHTPEYVRAYCDGTLDAKAQRRIGLPWSPALVNRTCVAVGGSVLTARLALEHGLACNTAGGTHHAFPGYGSG 129 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21612.6617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21612.6617.1 >prot_L-elsbetiae_contig21612.6617.1 ID=prot_L-elsbetiae_contig21612.6617.1|Name=mRNA_L-elsbetiae_contig21612.6617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=147bp SLGGTVHQDFPPVVYHERYSAAPWPSKHSFPMSKFSDLAELLAKPDGPLGback to top mRNA from alignment at L-elsbetiae_contig21612:1021..2091+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21612.6617.1 ID=mRNA_L-elsbetiae_contig21612.6617.1|Name=mRNA_L-elsbetiae_contig21612.6617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1071bp|location=Sequence derived from alignment at L-elsbetiae_contig21612:1021..2091+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21612:1021..2091+ >mRNA_L-elsbetiae_contig21612.6617.1 ID=mRNA_L-elsbetiae_contig21612.6617.1|Name=mRNA_L-elsbetiae_contig21612.6617.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig21612:1021..2091+ (Laminarionema elsbetiae ELsaHSoW15)back to top |