mRNA_L-elsbetiae_contig2156.6600.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A6H5KT61_9PHAE (Hira domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT61_9PHAE) HSP 1 Score: 295 bits (754), Expect = 5.030e-90 Identity = 147/198 (74.24%), Postives = 156/198 (78.79%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAV-----------------------------AASSPAP---NEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSM PFR+ AA+V AAS+P+P EDVQLLA LPQHTGSVLCVRWSH GRYLASASDD +VL+WELLP G AAAAPFGSTETPN+ENWSRVCVLRGH+MDVLDC W P+DSMLVSCSIDNKVIVW Sbjct: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMAPFRASAASVSAXXXXXXXXXXXXXXXXXXXXXXEEGPSAASTPSPLVQGEDVQLLAGLPQHTGSVLCVRWSHAGRYLASASDDKFVLVWELLPEGSAAAAPFGSTETPNIENWSRVCVLRGHSMDVLDCAWSPNDSMLVSCSIDNKVIVW 198
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A5B6ZH20_DAVIN (Uncharacterized protein (Fragment) n=2 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZH20_DAVIN) HSP 1 Score: 147 bits (370), Expect = 1.300e-41 Identity = 77/166 (46.39%), Postives = 99/166 (59.64%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 MI +KP + H G + I+S+ + PDG RFATGG DH+VRIW+M+ +V +LLA L H GSV CVRW+ GRY+AS SDD +L+ E P + FGS E P+VENW V LRGH DV+D +W PDDS+L S S+DN V +W Sbjct: 1 MIAEKPSWIMHEGMQ-----IFSIDIQPDGLRFATGGGDHKVRIWNMK-------SVGRDLDTDESTPKLLATLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPG--SGTTEFGSGEPPDVENWKVVMTLRGHTADVVDLNWSPDDSILASGSLDNTVHIW 152
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A427Y4Q2_9TREE (Protein HIR n=1 Tax=Apiotrichum porosum TaxID=105984 RepID=A0A427Y4Q2_9TREE) HSP 1 Score: 157 bits (396), Expect = 2.560e-41 Identity = 83/167 (49.70%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 1 MILDKPLSVGHF-GEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 M + KP V H GEK+ IYS++VHPDG+R ATGG D++V+IWS P P A A++P +LL + HTG VL VRW+H GRYLAS SDD+ +LIW++ PAG FGS E NVENW + L GH DV+DC W DD+ML S +D+K I+W Sbjct: 1 MKVTKPNWVEHAAGEKQTKSPIYSINVHPDGTRLATGGQDNKVKIWSTLPILDPQAEEDAANP------RLLCTMSAHTGPVLTVRWAHHGRYLASGSDDSVILIWDIDPAG--GGRVFGSEEV-NVENWKALRRLVGHEADVVDCAWSRDDAMLASVGLDSKFIIW 158
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A0J0XQ85_9TREE (Protein HIR n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XQ85_9TREE) HSP 1 Score: 151 bits (382), Expect = 1.970e-39 Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 1 MILDKPLSVGHF-GEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNE-DVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 M + KP V H G+K+ IYS+ VHPDG+R ATGG D++V+IW+ P PAAA NE + +LL + HTG VL VRW+H GR+LAS SDD+ +LIW++ PAG FGS E NVENW + L GH DV+DC W DD+ML S +D+K+I+W Sbjct: 1 MKVIKPAWVEHSTGDKQTRSPIYSISVHPDGTRLATGGQDNKVKIWNTLPILDPAAAE-------NELNHKLLCTMSAHTGPVLTVRWAHHGRFLASGSDDSVLLIWDIDPAG--GGRVFGSEEV-NVENWKALRRLVGHIADVVDCAWSRDDTMLASVGLDSKIIIW 158
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A427YKU2_9TREE (Protein HIR n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YKU2_9TREE) HSP 1 Score: 150 bits (379), Expect = 5.180e-39 Identity = 81/166 (48.80%), Postives = 101/166 (60.84%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 M + KP V H GE++ C IYS+ VHPDG+R ATGG D +V+IWS P AA A + +LL + +HTGSVL VRW+H GR+LAS SDD V+IW L P G +GS E NVENW + L GH DV+D W DDSML S +D+KV +W Sbjct: 1 MRVTKPAWVEHKGERENRCPIYSLSVHPDGTRLATGGLDRKVKIWSTLPILDQAAE------ADEANHKLLCTMSEHTGSVLAVRWAHHGRFLASGSDDAVVMIWGLDPDG--GGRLWGSDEV-NVENWKPLTRLVGHQADVVDIAWSRDDSMLASTGLDSKVWIW 157
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A388K8R3_CHABU (Protein HIRA n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K8R3_CHABU) HSP 1 Score: 150 bits (379), Expect = 5.490e-39 Identity = 80/166 (48.19%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 MI+ KP V H I+S+ +HPDGSRFAT G D +VRIWSM P A ++P + LA L H +V VRWS GRY+AS SDD V ++E P + FGS E P+VENW V LRGH DV+D WCPDDS+LVSCS+DN + VW Sbjct: 1 MIVVKPPWVCH-----GRLSIFSIDIHPDGSRFATAGGDQKVRIWSMVPLVDKEAETDLTTP------KALATLCDHFAAVNVVRWSRAGRYIASGSDDHIVFVYERRPG--SGTVVFGSREKPDVENWKAVITLRGHTADVVDLAWCPDDSLLVSCSLDNTLRVW 153
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A7D8ZK49_9TREE (Uncharacterized protein n=1 Tax=Vanrija humicola TaxID=5417 RepID=A0A7D8ZK49_9TREE) HSP 1 Score: 148 bits (374), Expect = 1.040e-38 Identity = 82/168 (48.81%), Postives = 106/168 (63.10%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACV-IYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNE-DVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 M + KP V H ++KQ+ IYS+ VHPDG+R A+GG D++V+IWS P + S A NE + +LL + HTG VL VRW+H GRYLAS SDD+ VLIW++ PAG FGS E NVENW + L GH DV+DC W DDSML S +D+K+ +W Sbjct: 1 MKVVKPNWVIHSTDEKQSRTPIYSISVHPDGTRLASGGQDNKVKIWSTLP-------ILDSEAADNELNHKLLCTMASHTGPVLAVRWAHHGRYLASGSDDSVVLIWDIDPAG--GGRVFGSEEF-NVENWKALRRLVGHVADVVDCAWSRDDSMLASVGLDSKIFIW 158
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A5M6BYG7_9TREE (Protein HIR n=1 Tax=Kwoniella shandongensis TaxID=1734106 RepID=A0A5M6BYG7_9TREE) HSP 1 Score: 149 bits (375), Expect = 1.770e-38 Identity = 80/167 (47.90%), Postives = 102/167 (61.08%), Query Frame = 1 Query: 1 MILDKPLSVGHF-GEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 M + KP V H G+KK C IYS+ VHPDG+R ATGG DH+V+IWS P PAA +E+ +LL + HTG VL VRW+H GR+LA+ SDD ++IW + P G +GS E NVENW + L GH DV+D W DDSML S +D+KV +W Sbjct: 1 MRVCKPSWVEHTSGDKKNKCPIYSISVHPDGTRLATGGLDHKVKIWSTLPILDPAAE------KDDENHKLLCTMAAHTGPVLSVRWAHHGRFLATGSDDQVIMIWGIDPDG--GGRLWGSDEV-NVENWKALTRLVGHVADVVDLAWSRDDSMLASVGLDSKVWIW 158
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A176VSY3_MARPO (Protein HIRA n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VSY3_MARPO) HSP 1 Score: 147 bits (372), Expect = 4.790e-38 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQLLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 MI++K + H G + I+S+ + PDGSRFAT G DH+VRIWSM A+ +S P++ +LLA L H GSV CVRW+ GG ++AS SDD +L+ + P + FGS E P+ ENW + LRGH+ DV+D W PDDSM+ SCS+DN V +W Sbjct: 159 MIVEKLDWLRHAGLQ-----IFSLDIQPDGSRFATAGGDHKVRIWSM-------TALQSSDQGPSQP-RLLATLRDHFGSVNCVRWAKGGHFIASGSDDNLILVHKRHPG--SGTTEFGSGEPPDAENWKTLLTLRGHSADVVDLGWSPDDSMIASCSLDNSVRIW 309
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Match: A0A392LZT3_9FABA (Protein HIRA-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392LZT3_9FABA) HSP 1 Score: 145 bits (367), Expect = 4.890e-38 Identity = 79/167 (47.31%), Postives = 100/167 (59.88%), Query Frame = 1 Query: 1 MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFRSPAAAVAASSPAPNEDVQ-LLANLPQHTGSVLCVRWSHGGRYLASASDDTYVLIWELLPAGLAAAAPFGSTETPNVENWSRVCVLRGHAMDVLDCDWCPDDSMLVSCSIDNKVIVW 498 MI +KPL V H G + I+S+ V P G RFATGG DH+VRIW+M+ V+ + +E Q LLA L H GSV CVRW+ GRY+AS SDD +LI E P + FGS E P++ENW LRGH DV+D +W PDDS L S S+DN + +W Sbjct: 1 MIAEKPLWVRHEGMQ-----IFSIDVQPGGLRFATGGGDHKVRIWNMK-------CVSTTDSTNDEPSQRLLATLRDHFGSVNCVRWAKHGRYVASGSDDQVILIHERKPG--SGTTEFGSGEAPDIENWKVAMTLRGHTADVVDLNWSPDDSTLASGSLDNTIHIW 153 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2156.6600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2156.6600.1 >prot_L-elsbetiae_contig2156.6600.1 ID=prot_L-elsbetiae_contig2156.6600.1|Name=mRNA_L-elsbetiae_contig2156.6600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp MILDKPLSVGHFGEKKQACVIYSVHVHPDGSRFATGGSDHRVRIWSMEPFback to top mRNA from alignment at L-elsbetiae_contig2156:19683..21077+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2156.6600.1 ID=mRNA_L-elsbetiae_contig2156.6600.1|Name=mRNA_L-elsbetiae_contig2156.6600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1395bp|location=Sequence derived from alignment at L-elsbetiae_contig2156:19683..21077+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2156:19683..21077+ >mRNA_L-elsbetiae_contig2156.6600.1 ID=mRNA_L-elsbetiae_contig2156.6600.1|Name=mRNA_L-elsbetiae_contig2156.6600.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig2156:19683..21077+ (Laminarionema elsbetiae ELsaHSoW15)back to top |