mRNA_L-elsbetiae_contig2156.6598.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2156.6598.1
Unique NamemRNA_L-elsbetiae_contig2156.6598.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: D8LCZ7_ECTSI (ARLX, novel ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ7_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 6.680e-91
Identity = 146/187 (78.07%), Postives = 158/187 (84.49%), Query Frame = 1 
Query:    1 MGNSMKKEVQVILEGRPGSGKSSALFHLKNGETLLTPTPGSEGFYVESATHAGTRLNVWEVQPSSTAAREKSWTVARALVFVVDST---KDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAVRGKKASSARLK 552
            MGNSM+KEVQVILEGR GSGKSSALFHLK+GETLLTPTPG EGFYVE A HAGTRLNVWEVQPSST  REKS TVARALV+V+DST     ++ AK+DL  ILT LASQ PRTCFTVLVLANKQD+  A SPATIER +  SSRPDG TWRWAVQSCSA++GLGLKEGMDWLA AVRGK  S +R K
Sbjct:    1 MGNSMRKEVQVILEGRSGSGKSSALFHLKHGETLLTPTPGIEGFYVERAVHAGTRLNVWEVQPSSTIVREKSLTVARALVYVIDSTGGSAGIQDAKEDLYPILTALASQKPRTCFTVLVLANKQDIPAAASPATIERDLAISSRPDGSTWRWAVQSCSAKEGLGLKEGMDWLAKAVRGKNVSPSRPK 187
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: G0S6W6_CHATD (Putative ADP-ribosylation factor n=8 Tax=Sordariomycetidae TaxID=222544 RepID=G0S6W6_CHATD)

HSP 1 Score: 97.8 bits (242), Expect = 5.060e-20
Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A++FVVDST D+E+ +   D +  +L  +  +    +LV ANKQD  GA   A I +A+      D +   W++ +CSA +G G+ EGMDWLA  V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYKNLNFNVWDLGGQTSIRPYWRCYYANTAAVIFVVDST-DIERLQTAADELAAMLNEEELKDA-ALLVFANKQDQPGAKGAADISQALRLGELRDRN---WSIMACSAVEGTGITEGMDWLAQTV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: G2QEQ9_MYCTT (Uncharacterized protein n=5 Tax=Chaetomiaceae TaxID=35718 RepID=G2QEQ9_MYCTT)

HSP 1 Score: 97.4 bits (241), Expect = 6.920e-20
Identity = 63/171 (36.84%), Postives = 95/171 (55.56%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A++FVVDST D+E+ +   D +  +L     +    +LV ANKQD  GA   A I +A+      D +   W++ +CSA +G G+KEGMDWL+  V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYGKLNFNVWDLGGQTSIRPYWRCYYANTAAVIFVVDST-DIERLQTAADELAAMLNEDELKDA-ALLVFANKQDQPGAKGAADISQALRLGELRDRN---WSIMACSAVEGSGIKEGMDWLSQTV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: A0A6A7C0M5_9PEZI (ADP-ribosylation factor-like protein-like protein 1 n=1 Tax=Piedraia hortae CBS 480.64 TaxID=1314780 RepID=A0A6A7C0M5_9PEZI)

HSP 1 Score: 97.1 bits (240), Expect = 9.700e-20
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A++FV+DST D+E+ +   D + T+L     +    +LV ANKQD  GA S A I  A+  +   D     W++ +CSA  G G+ EGMDWL   V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYKNLTFNVWDLGGQTSIRPYWRCYFANTAAVIFVIDST-DIERLQTAADELKTMLDDDELKDA-ALLVFANKQDQPGAKSAAEISEALKLAQLKDRS---WSIMACSAIDGSGINEGMDWLVQTV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: A0A150UX49_9PEZI (Uncharacterized protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A150UX49_9PEZI)

HSP 1 Score: 96.3 bits (238), Expect = 1.810e-19
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A+VFV+DST DVE+ +   D + ++L  +  R    +LV ANKQD  GA     I  A+      D +   W++ +CSA  G G+ EGMDWL   V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYKNLNFNVWDLGGQTSIRPYWRCYYANTAAVVFVIDST-DVERLETAADELRSMLQEEELRDA-ALLVFANKQDQPGAKGAGEISEALKLGQLKDRN---WSIMACSAIDGRGINEGMDWLVQTV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: A0A6H0XM75_9PEZI (Uncharacterized protein n=1 Tax=Peltaster fructicola TaxID=286661 RepID=A0A6H0XM75_9PEZI)

HSP 1 Score: 96.3 bits (238), Expect = 2.690e-19
Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A+VFVVDST D+E+     + +  +L  +  R    +LV ANKQD  GA   A I  A+      D +   W++ +CSA  G G+ EGMDWL  +V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYKSLNFNVWDLGGQTSIRPYWRCYYANTAAVVFVVDST-DIERLSTAAEELSAMLGEEELRDA-ALLVFANKQDQPGAKGAADISEALKLGQLKDRN---WSIMACSAIDGRGVNEGMDWLVVSV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: A0A6A6UMI7_9PEZI (ARF/SAR superfamily n=1 Tax=Microthyrium microscopicum TaxID=703497 RepID=A0A6A6UMI7_9PEZI)

HSP 1 Score: 95.5 bits (236), Expect = 3.390e-19
Identity = 63/171 (36.84%), Postives = 91/171 (53.22%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+    LNVW++  Q S        +    A++FVVDST D+E+ +   D +  +L  +  R    +LV ANKQD  GA     I  A+      D +   W + +CSA  G G+ EGMDWL   V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTMPTIG---FNVESVTYKNLNLNVWDLGGQTSIRPYWRCYYANTAAVIFVVDST-DIERLQTASDELAAMLGEEELRDA-ALLVFANKQDQPGAKGAGEISEALKLGELRDRN---WTIVACSAIDGRGVNEGMDWLVQTV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: B6QP19_TALMQ (ADP-ribosylation factor, putative n=18 Tax=Eurotiales TaxID=5042 RepID=B6QP19_TALMQ)

HSP 1 Score: 95.1 bits (235), Expect = 4.740e-19
Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAVRGKKA 534
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+    LNVW++  Q S        +    A+VFV+DST D+E+     D +  +L  +  R    +LV ANKQD  GA     I  A+      D +   W++ +CSA  G G+ EGMDWL   ++ + A
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYKNLNLNVWDLGGQTSIRPYWRCYYANTAAVVFVIDST-DIERLGIAADELAAMLNEEELRDA-ALLVFANKQDQPGAKGAGEISEALKLGELRDRN---WSIVACSAIDGKGINEGMDWLVQTIQSENA 182
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: A0A0C4DKN2_MAGP6 (ADP-ribosylation factor-like protein 1 n=8 Tax=Sordariomycetes TaxID=147550 RepID=A0A0C4DKN2_MAGP6)

HSP 1 Score: 94.0 bits (232), Expect = 1.150e-18
Identity = 61/171 (35.67%), Postives = 93/171 (54.39%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAV 519
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A++FVVDST D+E+ +   D +  +L  +  +   ++LV ANKQD  GA     I +A+      D +   W++ +CSA  G G+ EGMDWL   V
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYKNLNFNVWDLGGQTSIRPYWRCYYANTAAVIFVVDST-DIERLQTAADELAAMLNEEELKDA-SLLVFANKQDQPGAKGAGDISQALRLGELRDRN---WSIMACSAVDGSGVNEGMDWLVQTV 177
[Close]
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Match: A0A254U0V3_ASPNG (Phosphoribosylglycinamide formyltransferase n=83 Tax=Aspergillus TaxID=5052 RepID=A0A254U0V3_ASPNG)

HSP 1 Score: 94.0 bits (232), Expect = 1.210e-18
Identity = 62/176 (35.23%), Postives = 93/176 (52.84%), Query Frame = 1 
Query:   16 KKEVQVILEGRPGSGKSSALFHLKNGETLLT-PTPGSEGFYVESATHAGTRLNVWEV--QPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGILTVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWAVQSCSARQGLGLKEGMDWLATAVRGKKA 534
            KKE+++++ G   +GK++ L+ LK GE + T PT G   F VES T+     NVW++  Q S        +    A++FV+DST D+E+     D +  +L  +  R    +LV ANKQD  GA     I  A+      D +   W++ +CSA  G GL EGMDWL   ++ + A
Sbjct:   15 KKEIRILILGLDNAGKTTLLYRLKIGEVVTTIPTIG---FNVESVTYRNLNFNVWDLGGQTSIRPYWRCYYANTAAVIFVIDST-DIERLGTAADELAAMLNEEELRDA-ALLVFANKQDQPGAKGAGEISEALKLGELRDRN---WSIVACSAIDGKGLNEGMDWLVQTLQSENA 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2156.6598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCZ7_ECTSI6.680e-9178.07ARLX, novel ARF-like Ras superfamily GTPase n=2 Ta... [more]
G0S6W6_CHATD5.060e-2036.84Putative ADP-ribosylation factor n=8 Tax=Sordariom... [more]
G2QEQ9_MYCTT6.920e-2036.84Uncharacterized protein n=5 Tax=Chaetomiaceae TaxI... [more]
A0A6A7C0M5_9PEZI9.700e-2036.84ADP-ribosylation factor-like protein-like protein ... [more]
A0A150UX49_9PEZI1.810e-1936.84Uncharacterized protein n=5 Tax=Eukaryota TaxID=27... [more]
A0A6H0XM75_9PEZI2.690e-1936.84Uncharacterized protein n=1 Tax=Peltaster fructico... [more]
A0A6A6UMI7_9PEZI3.390e-1936.84ARF/SAR superfamily n=1 Tax=Microthyrium microscop... [more]
B6QP19_TALMQ4.740e-1935.80ADP-ribosylation factor, putative n=18 Tax=Eurotia... [more]
A0A0C4DKN2_MAGP61.150e-1835.67ADP-ribosylation factor-like protein 1 n=8 Tax=Sor... [more]
A0A254U0V3_ASPNG1.210e-1835.23Phosphoribosylglycinamide formyltransferase n=83 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2156contigL-elsbetiae_contig2156:8615..12966 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.6
Seed ortholog evalue1e-74
Seed eggNOG ortholog2880.D8LCZ7
KEGG koko:K07937,ko:K07941
KEGG Pathwayko04014,ko04072,ko04144,ko04666,ko05110,ko05134,map04014,map04072,map04144,map04666,map05110,map05134
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the small GTPase superfamily. Arf family
EggNOG OGsCOG1100@1,KOG0071@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Ec32 ortholog descriptionARLX, novel ARF-like Ras superfamily GTPase
Ec32 orthologEc-01_001690.1
Exons4
Model size1575
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2156.6598.1prot_L-elsbetiae_contig2156.6598.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2156 8615..12069 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815880.1922114-CDS-L-elsbetiae_contig2156:8614..86561622815880.1922114-CDS-L-elsbetiae_contig2156:8614..8656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 8615..8656 +
1691683164.7379122-CDS-L-elsbetiae_contig2156:8614..86561691683164.7379122-CDS-L-elsbetiae_contig2156:8614..8656Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 8615..8656 +
1622815880.2040346-CDS-L-elsbetiae_contig2156:9322..95541622815880.2040346-CDS-L-elsbetiae_contig2156:9322..9554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 9323..9554 +
1691683164.7525558-CDS-L-elsbetiae_contig2156:9322..95541691683164.7525558-CDS-L-elsbetiae_contig2156:9322..9554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 9323..9554 +
1622815880.2166483-CDS-L-elsbetiae_contig2156:10509..106571622815880.2166483-CDS-L-elsbetiae_contig2156:10509..10657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 10510..10657 +
1691683164.7647657-CDS-L-elsbetiae_contig2156:10509..106571691683164.7647657-CDS-L-elsbetiae_contig2156:10509..10657Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 10510..10657 +
1622815880.2354078-CDS-L-elsbetiae_contig2156:11813..120691622815880.2354078-CDS-L-elsbetiae_contig2156:11813..12069Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 11814..12069 +
1691683164.7734141-CDS-L-elsbetiae_contig2156:11813..120691691683164.7734141-CDS-L-elsbetiae_contig2156:11813..12069Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2156 11814..12069 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815880.2495928-UTR-L-elsbetiae_contig2156:12069..129661622815880.2495928-UTR-L-elsbetiae_contig2156:12069..12966Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2156 12070..12966 +
1691683164.7824857-UTR-L-elsbetiae_contig2156:12069..129661691683164.7824857-UTR-L-elsbetiae_contig2156:12069..12966Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2156 12070..12966 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2156.6598.1

>prot_L-elsbetiae_contig2156.6598.1 ID=prot_L-elsbetiae_contig2156.6598.1|Name=mRNA_L-elsbetiae_contig2156.6598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp
MGNSMKKEVQVILEGRPGSGKSSALFHLKNGETLLTPTPGSEGFYVESAT
HAGTRLNVWEVQPSSTAAREKSWTVARALVFVVDSTKDVEQAKQDLDGIL
TVLASQTPRTCFTVLVLANKQDVHGALSPATIERAIDPSSRPDGDTWRWA
VQSCSARQGLGLKEGMDWLATAVRGKKASSARLKRSSSGGTGTGSSTGAG
TGVNELEGLAPPPAFPAMGAPISSS*
back to top

mRNA from alignment at L-elsbetiae_contig2156:8615..12966+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2156.6598.1 ID=mRNA_L-elsbetiae_contig2156.6598.1|Name=mRNA_L-elsbetiae_contig2156.6598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4352bp|location=Sequence derived from alignment at L-elsbetiae_contig2156:8615..12966+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGAAACTCAATGAAGAAGGAAGTTCAAGTCATCCTTGAGGTGAGAGG
GCTACCGCTGAGTTCGACCCACGCACACCCCATTGGTAAATCTCGCATCA
AGAAGTGGTGCTGCTGCTGCTGCTGCAGTAAACAACGGGTACCCGATTTG
TGTACTAATGTATCCATCGGATCACATGTGTTCAGTACGTCTGCTGCGCA
GTAGTGGTTCCGGCCACGCCAGTGTTAAGCTGGTAGCATTGTTGCTGCTG
CTGAGCCGCTGCTCTGGAATGGAATTAATTTTTGCCGGTGGCACACCTGT
AGATATGACTCCCGTTTTCCAAGAACCAAAAGAACCCCACTTTATTTAAC
CCTACTGGCCTACTGGCACACACCACAACAGTAAGTAGTGCAGTTCCCAA
CACGATAAACCGCAGACAAAAATCTCCGACGAGTACGCACACTAATGCAG
ACATCAAAAAATGCTGCAAGCTAGAGAGAGGGATGGAAAAGGCATGGATG
TACATAGAAGTAGTACCTGTCGCACCTCGTGGCTGTTGCTTCCCATCTGG
CCACGATGCTTGTTGCACACTCTCTTGGCGGCGCCTCCCCCACGTCCGGG
GATGGCTGTTTAACGTTTACATTGTCCTGTGCGTATGTATATATAACACA
CGTACATGTGTGTATGTACATGTATGATGCTCTTGTTATCATGCTGGTGT
GATACCAGGGACGGCCGGGGTCAGGGAAGAGCTCGGCATTGTTTCACCTC
AAGAACGGGGAGACGCTCCTGACGCCCACGCCGGGAAGCGAGGGCTTTTA
CGTCGAGAGCGCGACCCACGCGGGAACCAGGCTGAACGTCTGGGAGGTGC
AGCCGAGCAGCACGGCGGCGAGGGAGAAGTCCTGGACTGTAGCGCGGGCG
CTTGTTTTCGTGGTGGACAGCACGAAAGACGTCGAACAAGGTGCGTGCAA
TTATTATTTGCTTGTATTTAGTGTTTGTACATGCATGACAGGCACACACA
CCTTCGACCAGTTTCTGCCGCGATCTTGTCCAAGACGGCCATGATATATT
TGTGTTACACTTCGAAGTGTACTACTCTGTTCGTATCGCACAACAACCAG
GTGCCCGGATACTCTATAATGATATCGTGGGATCCGTAGGGTCGAGGCGG
ACGTCAGGCCGCAAGGATCGTGCGGAACTGTTGTGCACCTCGCCTACTGC
TGTGATTTGGTTGTACGCACACGGCGTGAGCGCACTCGAAGAATGTACGC
GTCGCTCCGTGCCGCGATATTTTCTTGGAATGTACTCCCTCCATCCAGAC
ATTTCCCGCTCTTCCACGGGATCGGCGAAGGCGTTCCAGCCGAGCCGTAT
TTCCACCCCTCCGCGCGAAGAAGAGCGTTGAGATGGATACTTTACATATG
TACATACAATCACTCGATTAGAGAAAGACATTACGTGCCCGTAGTTTTCC
TATTGGTCAACATTGGCGCCGCTGATTTATGATTGGCCGGCTTTCCTTGG
GCGGCGAGCATCGTCGGCCACGGTCGGACTGTCTCAATTTCTTCCAGGAA
GGATCTGCCTCTTTCACGCCGCGGGTTCTAGAATTCCACGACACCTAAAC
AACTGCGCCCCGCCTGTGCTATGCCGCCAACTCTCGACCGCTACATAAGA
TACGGACAACCCACTTAGGATTTATGTAGCTTGTTTGAGTCCGCGCTAAA
TTCTGCAACAGCTGCTGGCTCATCACGCGCATTTATTCAAGCCAGGCCGA
GTTCTTGCCGGCTTCGAAAACCAGCTTGCTCCGTCCTCTGCCCCTATATC
TTCCGGCGAGCTTGTGTGTGTACACCCCCCCGCCCGCTTTTCAAACACGC
CCCCTTTACCGCCCCGAACTCCCGGCCGTCAACGCTCCATCCCAGCGAAA
CAAGACCTGGACGGGATTCTTACGGTGCTGGCGTCGCAGACGCCGCGCAC
GTGCTTCACCGTGCTGGTGCTCGCTAACAAGCAAGACGTCCATGGGGCCC
TGTCTCCGGCCACGATCGAGCGGGCCATCGACCCGTCCTCGAGGTGAGAG
AGGAGAGAGAGAGAGATGGAGAGAGGCGCGGCAGCATGCCGTCTGGAGCA
GAGCGACGACGACGACGGTCTTTTTTCGTTTCATGTGGCCTGCTACATAT
ATTCATAAACGCCTTGGGCGTGTACGGGCGTGTGCGGGCGAGCTTTGTTG
CGGGGCGTGTCTGTGTTGGTGTGTTTCAGTATCGGACTGAGTTCATGCCT
GGCTTTCTTTCAACCTGGAGAACTTCGTGTTTTCAAACCGTCTCAATTGA
AACGCCCAACCTTCTGTCCACCTGGTCGGGTTTTGCTTCACGAAAAAAAG
TTAACACACGCCCTGCGAACCAGCCGAAACGGCAGACACGCGAAGATAGC
CGGGATGCTCCCCTTCATGAAGATGTAGCTTTGAGACAACCAAACGGATT
CCGACACTCATAGCATTTGCGGTGCCAAACACGTGTCCTTATTGTACTGG
TTTCAAAGAAGAATCAGAACCAGAAGTCTATTCCCCGCAACTTCAAGTAC
GTTGTCCATCCTTAAAGATGACGCAACCGACGCCCCCAACACGGCGGTGC
CAGCCAGCCTTAGGGTTTTTCACGTTTTAACACGGGCCGCGCCGTCACTT
CGATCGCACCGCGTGCTTCTTCGTCTAGGCGTTGCGTTGCGTCGAGCAGT
TGTTCTTTCGACTCAGCCTGCATCACACAGCAGTGTGCTGCGGTTCTCCA
TTACCATCGCCTCCATGAGCCATCATCACACAATCAAGGCCATAAAAATG
TAACAGGCAGGCAGGCACCACAGGAGGCCCCCTCCTGTGTAACCCCGGCT
GGATCGTCTAGCTAATCGTAGTGGAGGAAGGGGGCCAGTGGGGCAGACGA
CGAACGAGCCAGTAATGGGAGGAAAATAACAAAAGACTCTTAACAGTGGG
GCAGACGACAGATCAGCCAATCATGAGAGGAAAAACACAAAAAACTCTTA
ACTTGAGCCATTATTTACTGCCTGTTTGGGGCCTCCGGACCGCTCTGGGC
GCTCGTGACTCTTCGACTGAACTCTGTGTTCCTTGTCTGCAAGCGCGCGC
ACATGCCGTGGCGCCCCCTGAGCCATGTCGGCTTCTCTTCCTCCGGCTTT
TTTTTTCTCCGAAACGAAACCGCAACCACCCCCCCCGTGACTCGATCAGG
CCGGACGGCGACACTTGGAGATGGGCGGTGCAGAGCTGCTCGGCCAGGCA
GGGGCTGGGGCTGAAGGAAGGGATGGACTGGCTGGCGACGGCCGTTCGGG
GCAAGAAAGCCTCCTCGGCGAGGCTGAAGCGGAGCAGCAGTGGCGGCACC
GGCACCGGCTCCAGCACCGGCGCCGGCACCGGCGTGAACGAGCTTGAAGG
CCTGGCGCCGCCGCCCGCGTTTCCGGCGATGGGGGCGCCGATATCTTCTT
CTTGACCGGCCGCGCTTCCTTTTCTGTTATACACTTCGTACATGGTTCGC
GACTACTGTACATAACTTTCTAGCTCGCGAAAAGCGTCGGGATTTCTTCC
CCCCACCCCCGAGCTAGAATGCCAAACGCAGGGGGCAGCTGGGTGCGGCC
AAACATTGTTTTTGTTTTTCCATCTCTTGATGAAGGGCAAAATTTGTATT
CTTCAATTTTACAACATGTTTTTTTTAGGTCTTATTTCCCTTTTCCCTCG
AAGAGAGGCCTGTGGACATTAGGATAGAGGGGTAGGGTAGGGTTGCTCTC
AAAACCCCTGGCTGAGGGGAGATTCGGATTTGCAGCCCGAGCTACAGCGA
GCGGTCATGCACGTACATACGTGGCCAGGGTTTTGCTTGGGAGTTTTAGA
GGCGAGTCGCTTCCGACAACAGTGTTGATGGTTATCCGGTACACGCTTTT
GAACACTGGTGCGGGCCTATATGCAAGTGCTGCACTTGCCCTGTCCCTCT
CTTAGGGCCTCAGGTCGCCGCACCAATTTGGCAAGGGCCCTAGCCAGCCA
TCACAGCACGGTGGTTTGTACGGCTAGCGGGCGGTATTGGTTTGAGATCT
GATGTGTTGGGTGTGCTCTGAAGAGGTAGGATGGAAAACTCGGACGTTCT
CTTTCTAAGTCGGACAGAAAGCGGAGGGGGAAGGGCTACATTAAGTGGTG
CACAATCCTAGCAGCAAGCTTGCGAGGGAGAAGCAGCAGCAGCAGTAGCA
TGTAAGGCAGCAGCAGCAGCAGCGGCAGCAGCAGCGACAGCAGTGTTGTA
ACCGTAAGCACCATTTCTGATCGATTGTACCGGGTGCCGCTCCTGTGGAT
CCCGGAAGAGCCGTTTCACATTCATTCCAGGGGCCCAGTGTTTTCTTTGA
AT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2156:8615..12966+

>mRNA_L-elsbetiae_contig2156.6598.1 ID=mRNA_L-elsbetiae_contig2156.6598.1|Name=mRNA_L-elsbetiae_contig2156.6598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig2156:8615..12966+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGAAACTCAATGAAGAAGGAAGTTCAAGTCATCCTTGAGATGGGAAA
CTCAATGAAGAAGGAAGTTCAAGTCATCCTTGAGGGACGGCCGGGGTCAG
GGAAGAGCTCGGCATTGTTTCACCTCAAGAACGGGGAGACGCTCCTGACG
CCCACGCCGGGAAGCGAGGGCTTTTACGTCGAGAGCGCGACCCACGCGGG
AACCAGGCTGAACGTCTGGGAGGTGCAGCCGAGCAGCACGGCGGCGAGGG
AGAAGTCCTGGACTGTAGCGCGGGCGCTTGTTTTCGTGGTGGACAGCACG
AAAGACGTCGAACAAGGGACGGCCGGGGTCAGGGAAGAGCTCGGCATTGT
TTCACCTCAAGAACGGGGAGACGCTCCTGACGCCCACGCCGGGAAGCGAG
GGCTTTTACGTCGAGAGCGCGACCCACGCGGGAACCAGGCTGAACGTCTG
GGAGGTGCAGCCGAGCAGCACGGCGGCGAGGGAGAAGTCCTGGACTGTAG
CGCGGGCGCTTGTTTTCGTGGTGGACAGCACGAAAGACGTCGAACAAGCG
AAACAAGACCTGGACGGGATTCTTACGGTGCTGGCGTCGCAGACGCCGCG
CACGTGCTTCACCGTGCTGGTGCTCGCTAACAAGCAAGACGTCCATGGGG
CCCTGTCTCCGGCCACGATCGAGCGGGCCATCGACCCGTCCTCGAGCGAA
ACAAGACCTGGACGGGATTCTTACGGTGCTGGCGTCGCAGACGCCGCGCA
CGTGCTTCACCGTGCTGGTGCTCGCTAACAAGCAAGACGTCCATGGGGCC
CTGTCTCCGGCCACGATCGAGCGGGCCATCGACCCGTCCTCGAGGCCGGA
CGGCGACACTTGGAGATGGGCGGTGCAGAGCTGCTCGGCCAGGCAGGGGC
TGGGGCTGAAGGAAGGGATGGACTGGCTGGCGACGGCCGTTCGGGGCAAG
AAAGCCTCCTCGGCGAGGCTGAAGCGGAGCAGCAGTGGCGGCACCGGCAC
CGGCTCCAGCACCGGCGCCGGCACCGGCGTGAACGAGCTTGAAGGCCTGG
CGCCGCCGCCCGCGTTTCCGGCGATGGGGGCGCCGATATCTTCTTCTTGA
GCCGGACGGCGACACTTGGAGATGGGCGGTGCAGAGCTGCTCGGCCAGGC
AGGGGCTGGGGCTGAAGGAAGGGATGGACTGGCTGGCGACGGCCGTTCGG
GGCAAGAAAGCCTCCTCGGCGAGGCTGAAGCGGAGCAGCAGTGGCGGCAC
CGGCACCGGCTCCAGCACCGGCGCCGGCACCGGCGTGAACGAGCTTGAAG
GCCTGGCGCCGCCGCCCGCGTTTCCGGCGATGGGGGCGCCGATATCTTCT
TCTTGA
back to top