mRNA_L-elsbetiae_contig2156.6597.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: D8LCZ6_ECTSI (NYN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCZ6_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 9.640e-149 Identity = 229/279 (82.08%), Postives = 246/279 (88.17%), Query Frame = 1 Query: 730 ARKQKYGDLSARRAKALRTGGRAFFIVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPHWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYIDPANRFELLDSEGLVISVALCIALAAAGSERCDWVRMKTIVNSLHAWDLGLESPNYFGYWDYDEVVAAMDAYVTGVEDTSGEVVVKVPPKPKAGEVPRGLEDVATYLY 1566 A+KQ+YGD+SA+RAKALRTGG+AF IVCDAESIT PEL+ESIDILD LGTRD GVIYADW K WRSE FGRSKARDFKLLQR+ PL PGS+ L DDTMTA+++ALARSEE K YEFCL+SADGSL+ LAA+LR EG VRGVGRRQAPEEFL NCD FMYIDPANR+ELLD+EGLVISVALCIALAAAG ERCDWVRMKTIVNSLHAWDLGLESPNYFGY DYDE+V MDAYVTGVEDTSGEVVVKVPPKPKAGEVPRGLEDVATYLY Sbjct: 262 AKKQRYGDVSAKRAKALRTGGKAFLIVCDAESITSPELLESIDILDELGTRDVGVIYADWNKTQDWRSELFGRSKARDFKLLQRE--PLPPGSNPL----GDDTMTAEVLALARSEELNK---YEFCLLSADGSLSELAAKLRGEGRAVRGVGRRQAPEEFLDNCDTFMYIDPANRYELLDNEGLVISVALCIALAAAGQERCDWVRMKTIVNSLHAWDLGLESPNYFGYSDYDEMVVKMDAYVTGVEDTSGEVVVKVPPKPKAGEVPRGLEDVATYLY 531
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: A0A3D9S0W9_9FLAO (Uncharacterized LabA/DUF88 family protein n=4 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A3D9S0W9_9FLAO) HSP 1 Score: 68.9 bits (167), Expect = 1.840e-9 Identity = 45/150 (30.00%), Postives = 72/150 (48.00%), Query Frame = 1 Query: 805 IVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPH---WRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYID 1245 ++ D ++I + E ++ + GT IY DW K PH W+S LL+ P+ + + D M D + + SE K FCLVS+D LA RLR+EG++V G+G ++ P+ F+ CD F+Y++ Sbjct: 9 VLIDGDNIPSRYIKEMMEEITKYGTPTVKRIYGDWTK-PHLSKWKSI-----------LLENAITPIQQYGYTTGKNATDSAMIIDAMDILYSE-----KVNGFCLVSSDSDFTKLATRLREEGLVVYGIGEKKTPDPFIVACDKFIYLE 141
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: A0A4Q3APN0_9BACT (NYN domain-containing protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q3APN0_9BACT) HSP 1 Score: 68.2 bits (165), Expect = 3.450e-9 Identity = 61/252 (24.21%), Postives = 105/252 (41.67%), Query Frame = 1 Query: 805 IVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPHWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYI-------------DPANR---FELLDSEGLVISVALCIALAAAGSERCDWVRMKTIVNSLHAWDLGLESPNYFGYWDYDEVVAAMDAYVTGVEDTSGEVVVKVPPK 1512 ++ DA++ + + + GT IY DW G+ K+ LL+ P+ S + + D M D + L + F FCLV++D LAAR+R+EG++V G G ++ P+ F+ CD F+Y D R EL + LV + + A+ +A E +W + + L +S NY GY +++ A+ + +D V+++ PK Sbjct: 13 VLIDADNAPAAVIAAVLTEVATYGTASVKRIYGDWTS---------GQLKSWKAPLLEHSIQPIQQFSYTTGKNATDSAMIIDAMDLLYTGRFSG-----FCLVTSDSDFTRLAARIREEGLVVYGFGEKKTPKPFVAACDKFIYTEVIQVASDSSAGSDEKTRKAGAELRKDQKLVKQIRM--AIDSATGEESEWASLGLVGTHLSKLMPDFDSRNY-GYGKLSDLLEAIGVFELSRKDK--HVLIRQKPK 245
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: A0A7Y2XDH5_9FLAO (NYN domain-containing protein n=1 Tax=Lutibacter sp. TaxID=1925666 RepID=A0A7Y2XDH5_9FLAO) HSP 1 Score: 65.9 bits (159), Expect = 1.940e-8 Identity = 43/147 (29.25%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 805 IVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPHWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYID 1245 ++ D ++I + E ++ + GT IY DW K SK ++ LL+ P+ ++ + D M D + + SE K FCLVS+D LA RLR+EG++V G+G ++ P F+ CD F+Y++ Sbjct: 9 VLIDGDNIPSKYIKEMMEEITKYGTPTIKRIYGDWTKPQ--------LSKWKNV-LLENAITPIQQYGYTVGKNATDSAMIIDAMDILYSE-----KVNGFCLVSSDSDFTKLATRLREEGLVVYGIGEKKTPNPFIVACDKFIYLE 141
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: UPI001AF1BDAE (NYN domain-containing protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=UPI001AF1BDAE) HSP 1 Score: 64.7 bits (156), Expect = 5.700e-8 Identity = 43/147 (29.25%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 805 IVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPHWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYID 1245 ++ DA++++ L D + GT IY DW NPH G K + LL P+ S + + D + D + + S + FC+VS+D LAARLR+ G+LV G+G ++ P+ F+ +C+ F Y++ Sbjct: 7 VLIDADNVSEKYLKYIFDEISNHGTPTYKRIYGDWT-NPH-----LGSWKKQ---LLDNSITPIQQYSYTTGKNATDAALIIDAMDILYSGNIEG-----FCIVSSDSDFTKLAARLRESGMLVIGMGEKKTPKPFIASCEKFKYLE 139
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: UPI00082C3C3D (NYN domain-containing protein n=1 Tax=Moraxella oblonga TaxID=200413 RepID=UPI00082C3C3D) HSP 1 Score: 64.7 bits (156), Expect = 6.210e-8 Identity = 42/149 (28.19%), Postives = 70/149 (46.98%), Query Frame = 1 Query: 805 IVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNP--HWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYID 1245 ++ DA++ + L ++ + LG + YADW K W+S LL P+ S + + D ++ D + L +F FCLVS+D LA R+R+EG++V G G++ P+ F+Q CD F Y++ Sbjct: 11 VLIDADNASTTHLEALLNEIATLGRSNVRRAYADWTKPQLASWKSV-----------LLSHSIQPIQQFSYTNGKNATDSSLIIDAMDLLYKGKFDG-----FCLVSSDSDFTRLAQRIREEGLIVYGFGKKHTPKAFMQACDRFTYLE 143
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: A0A7W5Z6Y3_9HYPH (HTH OST-type domain-containing protein n=19 Tax=Proteobacteria TaxID=1224 RepID=A0A7W5Z6Y3_9HYPH) HSP 1 Score: 63.5 bits (153), Expect = 1.260e-7 Identity = 44/153 (28.76%), Postives = 69/153 (45.10%), Query Frame = 1 Query: 805 IVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPH---WRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYIDPAN 1254 ++ D ++ T + + + GT IY DW K P+ W+ LL+ P+ + + + D M D + L + F FC+VS+D A LAAR+R++GV+V G G R+ P F+ CD F+Y D N Sbjct: 1 MLIDGDNATPKIITGLLAEIANYGTASVKRIYGDWTK-PNLNGWKE-----------CLLEHSIQPVQQFAYTTGKNATDGAMIIDAMDLLYTGRFSG-----FCIVSSDSDFARLAARIREQGVIVYGFGERKTPRPFITACDKFVYFDVLN 136
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: A6F854_9GAMM (HTH OST-type domain-containing protein n=5 Tax=Moritella TaxID=58050 RepID=A6F854_9GAMM) HSP 1 Score: 63.9 bits (154), Expect = 1.680e-7 Identity = 53/244 (21.72%), Postives = 109/244 (44.67%), Query Frame = 1 Query: 799 FFIVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPHWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYIDPANRFELLDSEGLVISVALCIALAAAGSERCDWVRMKTIVNSLHAWDLGLESPNYFGYWDYDEVVAAMDAYVTGVEDTSGEVVVKVPPKPKAGEV 1530 F ++ DAE+ + + + ++ ++ GT +YADW +PH ++ +K + +T D D + D + + + ++ C+VS+DG +A R+R+ G+ V +G++ PE F + C F++ID N FE+ + + L A ER D V + + + + + + P G+ +++ + D+ V++TS + + K AG++ Sbjct: 7 FAVLVDAENASHNDYLAMLEEVEKYGTVAIKWVYADWT-DPHQKA----------WKDILHETASSPKQQFHYGKDAADHALMMDAIEVTNNN----SRVNAVCIVSSDGGFYSVAQRIREYGIHVMAIGKKNTPERFRKACHNFVFID--NLFEVTQNNNDDLDTLLLNAYDRC-VERDDPVYLGDMGSMIKQINSSFD-PRTEGFQSLKKLIKSRDSLFDIVQETSDRCFIALKSKSTAGDL 231
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: A0A660T5I1_9SPIR (Maebl n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A660T5I1_9SPIR) HSP 1 Score: 63.2 bits (152), Expect = 1.720e-7 Identity = 56/206 (27.18%), Postives = 84/206 (40.78%), Query Frame = 1 Query: 871 LGTRDAGVIYADWEKNPHWRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYIDPANRFELLDSEGLVISVA-------LCIALAAAGSERCD---WVRMKTIVNSLHAWDLGLESPNYFGYWDYDEVVAAMDAY 1458 G IY DW NPH K LL+ P+ ++ + D M D + L +E+F FC+VS+D LAAR+R+EG++V G G + P F+ CD F+Y + E + S A L L A + D W + I ++ D +S NY G+ E++ A D + Sbjct: 35 FGIASVKRIYGDWT-NPHL--------KGWKESLLEYSIIPIQQFGYTVGKNATDSAMIIDAMDLLYTEKFDG-----FCIVSSDSDFTSLAARIREEGLIVYGFGEVKTPRPFVAACDKFIYTEILREDESTEQPQSRKSTAILKQDTKLVSLLRNAVEDSTDDTGWAYLGNIGQNIAKRDPAFDSRNY-GHKKLGELIDATDLF 225
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Match: UPI001A92AB76 (NYN domain-containing protein n=1 Tax=Alkalibacter sp. ES005 TaxID=2815577 RepID=UPI001A92AB76) HSP 1 Score: 62.4 bits (150), Expect = 3.270e-7 Identity = 52/197 (26.40%), Postives = 83/197 (42.13%), Query Frame = 1 Query: 793 RAFFIVCDAESITFPELVESIDILDGLGTRDAGVIYADWEKNPH---WRSERFGRSKARDFKLLQRDTPPLSPGSDSLEDDLRDDTMTADLVALARSEEFKKTKKYEFCLVSADGSLAGLAARLRQEGVLVRGVGRRQAPEEFLQNCDAFMYIDPANRFELLDSEGLVISVALCIALAAAGSERCDWVRMKTIVNSL 1374 R ++ DA++++ + +D L GT IY DW NPH W+S LL P+ S + + D + D + + S + FC+VS+D LAARLR+ G V G+G ++ P F+ C+ F Y+ E+L G + G ++ D K +VN+L Sbjct: 5 RKIAVLIDADNVSEKYIKFILDELSNHGTPTIKRIYGDWT-NPHLTSWKSV-----------LLNYSITPIQQYSYTTGKNATDAALIIDAMDILYSNNVEG-----FCIVSSDSDFTRLAARLREAGKYVVGMGEKKTPMPFISACEKFKYL------EVLAGTGGSNGNSTAGKTVKTGQQKNDMGNKKELVNAL 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2156.6597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2156.6597.1 >prot_L-elsbetiae_contig2156.6597.1 ID=prot_L-elsbetiae_contig2156.6597.1|Name=mRNA_L-elsbetiae_contig2156.6597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=522bp TRPRAAVLSQLAFAVPPPPTSRPPARPSPGGVWTGRGARVCTPAGRLAACback to top mRNA from alignment at L-elsbetiae_contig2156:900..7389- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2156.6597.1 ID=mRNA_L-elsbetiae_contig2156.6597.1|Name=mRNA_L-elsbetiae_contig2156.6597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6490bp|location=Sequence derived from alignment at L-elsbetiae_contig2156:900..7389- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2156:900..7389- >mRNA_L-elsbetiae_contig2156.6597.1 ID=mRNA_L-elsbetiae_contig2156.6597.1|Name=mRNA_L-elsbetiae_contig2156.6597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3132bp|location=Sequence derived from alignment at L-elsbetiae_contig2156:900..7389- (Laminarionema elsbetiae ELsaHSoW15)back to top |