mRNA_L-elsbetiae_contig21545.6593.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: D8LQ42_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ42_ECTSI) HSP 1 Score: 310 bits (794), Expect = 1.100e-93 Identity = 162/250 (64.80%), Postives = 192/250 (76.80%), Query Frame = 1 Query: 1 SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCSA-------AGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPC--GDGADGGGGASNGVFAAMAGYSPVSDVIEHSQLDLDMAEIE 723 SANDGGPHAWDEGWAFYAGSLEGT VGG+ DG QM+YALAEKRCENFGTC+ GVSA+N+ LL +W TGQ LLA EC A A+I +I LMAVPLIQG+LRY YLADP G GGDKEA+ELWAFSA+ILPWI+ CDA V VR N+++ A++PM+DG+ A KAELE VYSCMGITCAQVGGLLD DT + A FEPC D + ++ G +A +AGY P SDV+EHS+LDLD+A++E Sbjct: 180 SANDGGPHAWDEGWAFYAGSLEGTDVGGTGDG-QMLYALAEKRCENFGTCTGDSDGSDTTGVSAINSELLTLWETGQASLLAEECTEASAVIDQILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSASILPWISTCDAAVGTKVRDNTELGSASAPMADGYAAIKAELETVYSCMGITCAQVGGLLD-DTGAYYADFEPCVDADASTTSVTSATGTYANIAGYEPGSDVVEHSELDLDVADME 427
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A6H5KYS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS6_9PHAE) HSP 1 Score: 285 bits (730), Expect = 1.150e-89 Identity = 145/213 (68.08%), Postives = 167/213 (78.40%), Query Frame = 1 Query: 1 SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCS-------AAGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPCGDGADG 618 SANDGGPHAWDEGWAFY GSLEGTAVGGS DG QM+YALAEKRCENFGTC+ A GVSA+N+ LLD+W G+ +LLAG+C A A+I EI LMAVPLIQG+LRY YLADP G GGDKEA+ELWAFSAAILPWI+ CD V VR N+++ A++PM+DG+ A K +LE VYSCMGITCAQVGGLLD DT + FEPC D +DG Sbjct: 344 SANDGGPHAWDEGWAFYTGSLEGTAVGGSGDG-QMLYALAEKRCENFGTCTGDSDGSDATGVSAINSELLDLWEDGKANLLAGQCTQASAVIDEILPLMAVPLIQGLLRYTYLADPAIGTGGDKEAAELWAFSAAILPWISACDPAVGTAVRDNTELGGASAPMADGYAAIKGQLESVYSCMGITCAQVGGLLD-DTGAYYTNFEPCTDSSDG 554
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: D8LFX4_ECTSI (Probable high CO2 inducible periplasmic protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX4_ECTSI) HSP 1 Score: 250 bits (639), Expect = 4.980e-78 Identity = 127/209 (60.77%), Postives = 159/209 (76.08%), Query Frame = 1 Query: 1 SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCSA-------AGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPCGD 606 +ANDGGPHAWDEGW FYAGSLEGT G+ DG M+YALAEKRCENF TC+A G + VN+ +L+++ GQ +LL G+C AAG + +I LM VPL+QG+LRYFY ADP+ G GGDK A+ELWAFSAA+LP I ECD +VA VRAN+DI+ A +PMS+G+V K +LE VYSCMGI+C+QVGGL+ ++T + GFEPCGD Sbjct: 171 NANDGGPHAWDEGWGFYAGSLEGTE--GTGDG-VMLYALAEKRCENFATCTADDDGSDITGTAQVNSDMLELYKEGQVYLLDGDCGAAGDVKDKIIDLMGVPLVQGMLRYFYNADPEAGDGGDKAAAELWAFSAAMLPRINECDEEVATLVRANTDIASADAPMSEGYVFLKEQLESVYSCMGISCSQVGGLVIGESTTYYDGFEPCGD 376
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: D8LDE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE3_ECTSI) HSP 1 Score: 243 bits (621), Expect = 3.030e-71 Identity = 135/247 (54.66%), Postives = 169/247 (68.42%), Query Frame = 1 Query: 4 ANDGGPHAWDEGWAFYAGSLEGTAVGGSADG-GQMVYALAEKRCENFGTCSAA----GVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGD-KEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDED-TTNFIAGFEPCGDGADGGGGASNGVFAAMAGYSPVSDVIEHSQLDLDMAEIE 723 A DGGPH WDE WAFYAGSLEG + G+ADG G+M+YALA+KRC NFGTC A G +A+N +L++ G +LL G+CA A I LM VPL+Q LRY Y ADP GD K +ELWAF+AAILP I EC ADVA TVR+NSDI +P+S GFVA K ELE +YSC+G+TC QVGGLL D TT+++ G EPCG + ++ F +AG++PVSDV+EHS++DLD +E Sbjct: 173 AADGGPHYWDEAWAFYAGSLEGES--GNADGDGKMLYALAQKRCGNFGTCGGADGITGTAAINDDILELIGAGSGYLLEGKCAEAEEAKESIVQLMTVPLVQATLRYLYRADPASDYDGDAKHWAELWAFAAAILPLIDECSADVAHTVRSNSDIDSEHAPVSAGFVAVKEELESIYSCLGMTCDQVGGLLAGDSTTDYVPGLEPCGGEEE----PTDSSFDPIAGWTPVSDVVEHSKIDLDTLAME 413
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A7S1TU13_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU13_9STRA) HSP 1 Score: 208 bits (529), Expect = 7.590e-62 Identity = 118/253 (46.64%), Postives = 158/253 (62.45%), Query Frame = 1 Query: 1 SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCSA-------AGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAG--GDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLL---DEDTTNFIAGFEPCGDGADGGG-GASNGV-FAAMAGYSPVSDVIEHSQLDLDMAE 717 ++ND HAWDE W FY+G+LEG++ G+ DG + Y LAEKRC NFGTC+ G S VN LL ++ G L G+C +A ++ I M VPLIQG LRY Y ADP GGA K+ +E WAF++A+LP I CDA VA+ +RAN + VA SP++DG+ A AE++KVYSC+GITCA VGG + + T +++G EPC D G NG + AGY+ SDVI+H+++DLD E Sbjct: 80 TSNDDAVHAWDEAWVFYSGTLEGSSEEGNRDG-VLAYRLAEKRCANFGTCNGDDDGDATTGKSLVNDQLLSLYKQGMHALEDGKCNSAEVILRAIVKQMTVPLIQGTLRYAYKADPNGGADTPASKQQAEGWAFTSAVLPQIDACDAGVASMIRANMEYGVA-SPVADGYAAVYAEMQKVYSCLGITCADVGGYVASVTDGTITYVSGTEPCDDSLPSAPVGPQNGAGYGVYAGYAAGSDVIQHARIDLDHQE 330
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A7S1IQR3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQR3_9EUGL) HSP 1 Score: 205 bits (522), Expect = 3.930e-58 Identity = 117/239 (48.95%), Postives = 147/239 (61.51%), Query Frame = 1 Query: 7 NDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCSAAGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPCGDGADGGGGASNGVFAAMAGYSPVSDVIEHSQLDLDMAEIE 723 ND G HAWDE WAFYAGSLEG GS G YALA+KRC +FGTC+A+G SA+N +L ++ G L AG+C A +++ I MAVPL+QGVLRY + ADP G G KE +E WAF+ ILP + +C A TVR N DI+ A SP+S GF A K LE VY C+GITC VGG+L+ ++ AG EPC D +AG++ SDV EH++LDLD E Sbjct: 497 NDKGVHAWDEAWAFYAGSLEGADGSGS---GVQPYALADKRCVDFGTCTASGGSAINRDILALFQDGLALLRAGKCTDARSVMTAITRKMAVPLVQGVLRYAWKADPVNGVSGPKEIAEGWAFTRGILPQVQQCSVAAATTVRNNMDIASA-SPVSGGFAAVKQALESVYPCLGITCGDVGGVLNG--ASYYAGMEPCRD--------------TLAGFTFGSDVTEHARLDLDQQTFE 715
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A7R9Y8Q2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q2_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.570e-52 Identity = 121/254 (47.64%), Postives = 153/254 (60.24%), Query Frame = 1 Query: 22 HAWDEGWAFYAGSLE-GTAVGGSADGGQMVYALAEKRCENFGTCS-------AAGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQ-GGAGGDKEA-----SELWAFSAAILPWIAECDADVAATVRANSD-ISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTN---FIAGFEPCGDGADGGG-GASNGVFAAM-AGYSPVSDVIEHSQLDLDMAEIE 723 HAWDEGWAFYAGSLE GT G VYALAEKRC NF TC+ + G SAVN LL ++ GQ L AG C A ++ EI M VPLIQGVLRY YLAD GG E +E WAF+AA++P + CDA +AA +RAN + + TSP+ DG+ A++++ YSC+GITCA VGG L T +++G PC D A G G +NG A + AGY+ +DV EH+Q+DLD E + Sbjct: 127 HAWDEGWAFYAGSLEDGTGSG------VQVYALAEKRCANFFTCTGDDDGDASTGRSAVNAELLSLYQEGQLALNAGNCNGAALVVREIVKQMTVPLIQGVLRYAYLADQSIGGVQATPEEWEDDQAEGWAFTAAVMPQLDACDAALAAEIRANMEFVQGNTSPVQDGYEVVYAKMQRFYSCLGITCADVGGYLSSVTDGVPTYVSGAGPCVDAAPTGVVGPNNGAGAGVVAGYAFSTDVSEHAQIDLDQDEFD 374
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A7S0H741_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0H741_9EUKA) HSP 1 Score: 183 bits (464), Expect = 8.760e-52 Identity = 112/255 (43.92%), Postives = 148/255 (58.04%), Query Frame = 1 Query: 1 SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCS--AAGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGG------DKEASELWAFSAAILPWIAECDADVAATVRANSDISV------ATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPCGDGADGGGGASNGVFAAMAGYSPVSDVIEHSQLDLDMAEIE 723 S N G HAWDEG AFY GSLEGTA GGS+ G+++Y LAEKRC+NFGTC+ A+G S VN+ L +++ +G++ L G+C++ ++ ++ LM VPL+QG LRY Y GG K A+E F+AA+LP + C+ A TV AN + S + F A K E VY+C+GITCAQVGGLL+ D DGA A A MAGY P SDV EH+++DLD A +E Sbjct: 20 STNSGSVHAWDEGVAFYTGSLEGTAYGGSS-AGKLLYRLAEKRCKNFGTCALGASGTSHVNSELFELFASGRDLLQNGDCSSVRPVVNQVVRLMTVPLVQGALRYAYKVGKTGGVDNIPKDQTSKNAAEGATFAAAVLPLVHACNTASADTVSANLKFGLFPTGGAVESTLYSNFTAVKTAFENVYACLGITCAQVGGLLNGDAPY---------DGA----AACTFQSATMAGYVPGSDVTEHAKIDLDQAAME 260
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A7S2V1S6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S6_9STRA) HSP 1 Score: 187 bits (475), Expect = 9.570e-52 Identity = 102/208 (49.04%), Postives = 130/208 (62.50%), Query Frame = 1 Query: 7 NDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTC--------SAAGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPCGD 606 ND G AWDE AFY GSLEG V G DG ++Y+LA+KRC NFGTC S +G +AVN ++D++ G L G+C + I M +PL+QG LRY Y ADP+G G+K +ELWAFSAA+LP IAECD+ VA+ +R NS I PM DG+VA K LE YSC+G C+ VGG++D N+I+G EPC D Sbjct: 402 NDSGVVAWDEAVAFYTGSLEG--VDGKGDG-NLLYSLADKRCANFGTCTGDVGSSNSQSGRAAVNERIIDLFRDGSVKLHNGDCGEVEKVKNAIVDQMTIPLVQGTLRYLYKADPKGANEGNKARAELWAFSAAVLPRIAECDSGVASMLRENSYIG--KDPMKDGYVAVKEALETTYSCLGFMCSDVGGIIDGGAGNYISGMEPCED 604
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Match: A0A7S3WGG8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WGG8_EMIHU) HSP 1 Score: 181 bits (458), Expect = 3.490e-51 Identity = 107/246 (43.50%), Postives = 136/246 (55.28%), Query Frame = 1 Query: 1 SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCS-----AAGVSAVNTALLDMWHTGQEHLLAGECAAAGALIPEIASLMAVPLIQGVLRYFYLADPQGGAGGDKEASELWAFSAAILPWIAECDADVAATVRANSDISVATSPMSDGFVAAKAELEKVYSCMGITCAQVGGLLDEDTTNFIAGFEPCGDGADGGGGASNGVFAAMAGYSPVSDVIEHSQLDLDMAEIE 723 S N G HAWDEG AFYAGSLEG + + G++V+ LAEKRC NFGTC +G S +N LL + G+ L G+C ++ EI SLM VPL+QG LRY Y Q K A+E F+AA+LP + ECDA AAT+ A+ + F+A KA E Y+C+GITC VGGL+D D A PC DG F +AGY P SDV+ HS++DLD +E Sbjct: 27 SLNGGSVHAWDEGVAFYAGSLEGAS---GSPSGKLVWRLAEKRCANFGTCGLNGGETSGTSQINHLLLAQFQEGERLLQTGQCDRVRPVVDEIISLMTVPLVQGSLRYAYKIGEQPEERSQKNAAEGAIFTAAVLPLVHECDAAAAATISADMKFGLFDQGDLPDFLAVKAAFESTYACLGITCEHVGGLVDADGDPLHAMTAPCDDGP---------AFPLIAGYIPGSDVVPHSRVDLDQQAME 260 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21545.6593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21545.6593.1 >prot_L-elsbetiae_contig21545.6593.1 ID=prot_L-elsbetiae_contig21545.6593.1|Name=mRNA_L-elsbetiae_contig21545.6593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp SANDGGPHAWDEGWAFYAGSLEGTAVGGSADGGQMVYALAEKRCENFGTCback to top mRNA from alignment at L-elsbetiae_contig21545:1129..2266- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21545.6593.1 ID=mRNA_L-elsbetiae_contig21545.6593.1|Name=mRNA_L-elsbetiae_contig21545.6593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1138bp|location=Sequence derived from alignment at L-elsbetiae_contig21545:1129..2266- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21545:1129..2266- >mRNA_L-elsbetiae_contig21545.6593.1 ID=mRNA_L-elsbetiae_contig21545.6593.1|Name=mRNA_L-elsbetiae_contig21545.6593.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1446bp|location=Sequence derived from alignment at L-elsbetiae_contig21545:1129..2266- (Laminarionema elsbetiae ELsaHSoW15)back to top |