mRNA_L-elsbetiae_contig2154.6592.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A6H5JJW2_9PHAE (DUF1995 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW2_9PHAE) HSP 1 Score: 325 bits (834), Expect = 1.540e-105 Identity = 167/195 (85.64%), Postives = 175/195 (89.74%), Query Frame = 1 Query: 1 FEPRLEQQRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSPGNWKGKKGKHLRRVLAEAHDAAIILINPTDPDKFL--RPADYNAFESVYHLSPMRVNYLQPLPSPQ 579 FE RLE+QRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDD+QLRYNSPDFCHEAMAEFVELL LPLTTALENLKARQNRCK+VIQG HA+QVKEAMVLDAP SLQVVSL + VAK DRVVALV+P NW GKKG+HL+RVLAEAHDAAIILINP D DKFL RPADYN FE VYHLSPMRVNYL LP PQ Sbjct: 184 FEARLEKQRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDDSQLRYNSPDFCHEAMAEFVELLVLPLTTALENLKARQNRCKIVIQGAHHASQVKEAMVLDAPASLQVVSLSDAKVAKKDRVVALVAPENWTGKKGRHLKRVLAEAHDAAIILINPIDADKFLQARPADYNTFELVYHLSPMRVNYLHSLPPPQ 378
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: D7FVX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX0_ECTSI) HSP 1 Score: 234 bits (597), Expect = 5.770e-70 Identity = 126/165 (76.36%), Postives = 133/165 (80.61%), Query Frame = 1 Query: 1 FEPRLEQQRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSPGNWKGKKGKHLRRVLAEAHDAAIILINPTDPDKFLR 495 FE RLE+QRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDD+QLRYNSPDFCHEAMAEFVELL LPLTTALENLKA MVLDAP SLQVVSL + VAK DRVVALV+P NW GKKG+HL+RVLAEAHDAAIILINP D DKFL+ Sbjct: 294 FEARLEKQRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDDSQLRYNSPDFCHEAMAEFVELLVLPLTTALENLKA---------------------MVLDAPASLQVVSLSDAKVAKKDRVVALVAPENWTGKKGRHLKRVLAEAHDAAIILINPIDADKFLQ 437
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A1E7FKF5_9STRA (DUF1995 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKF5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 2.070e-16 Identity = 54/175 (30.86%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSPGNWKGKKGKHLRRVLAEAHDAAIILINPTDPDKF----LRPADYNAFESVYHLSPMRVNYL 558 DAADAAGA ++AA++ G++R++++V DA+L + E + +F+EL LP+ LE LK+ +NR K+V + + M L AP+ + + +L V K D++V +V+P + + ++ +L + D + P + AD FE+VYHL + V Y+ Sbjct: 160 DAADAAGAAILAAMLGGKQRMLIDVRDAELSSDP-----ETLVQFIELAILPIAAGLEGLKSTRNRVKIVFPKVSQLLEYRRTMALAAPEVVALSTLGFDPVEKRDKLVVIVAPEPDDEEGIQAIKELLTPSEDGVHPIQKPVVILNYHMLPFTGADLE-FETVYHLRLLAVQYM 328
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A7S4APJ7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4APJ7_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.240e-14 Identity = 54/175 (30.86%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSPGNWKGKKGKHLRRVLAEAHDAAIILINPTDPDKF----LRPADYNAFESVYHLSPMRVNYL 558 DAAD AGA ++AA++ G++R++V+V DA+L N P E + +F+EL LP+ LE LK+ +NR K+V + + M L AP+ + + +L V K D++V +V+P + + +R +L + A + P + D F + YHL + V Y+ Sbjct: 304 DAADGAGAAILAAMLGGKQRMLVDVRDAELS-NDP----EVLVQFIELAILPIAAGLEGLKSTRNRVKIVFPKVSQLLEYRRTMALAAPEVVALSTLGFDPVEKRDKLVVIVAPQPDDEEGIQAIRNLLTPLEEGAQPIQQPVVILNYHMLPFSGVDIE-FVTAYHLRLLAVQYM 472
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A7S1BZ77_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZ77_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.670e-14 Identity = 57/188 (30.32%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKAR-QNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSPGNWKGKKGKHLRRVLAEAHDAAIILINPTDPDKFLRP----------------ADYNAFESVYHLSPMRVNYL 558 DAAD+AG+ ++AA++ G RR++V+V DA L + P +A+F+EL LP+ LE L A +NR K+V + M L APD + + +L+ + D +V V+P + + L++ L+ P+DP L+P AD + +E VYHL + V Y+ Sbjct: 280 DAADSAGSSILAAMLGGHRRMLVDVRDADLS-SDPSL----LAQFIELSILPVAAGLEGLTAASRNRVKIVFSSVSCLLDYRREMALSAPDVVTLSTLDFAVAEEGDAIVVFVAPAPDDMEATEKLQK-----------LLEPSDPKDKLQPIVVLLNHHMIPIEVNGADLSVYEPVYHLRLLSVQYI 451
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A448Z529_9STRA (DUF1995 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z529_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.880e-14 Identity = 43/114 (37.72%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSP 387 DAAD AGA ++AA++ G++R++V+V DA+L N P E + +F+EL LP+ LE LK+ +NR K+V + + M L AP+ + + +L V K D++V +V+P Sbjct: 171 DAADGAGAAILAAMLGGKQRMLVDVRDAELS-NDP----EILVQFIELAILPIAAGLEGLKSTRNRVKIVFPKVSQLLEYRRTMALAAPEVVALSTLGFDPVEKRDKLVVIVAP 279
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A7S3P4L7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4L7_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.540e-14 Identity = 42/113 (37.17%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 49 AADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSP 387 AADAAGA V+A L+ G+RRL+V+V DA+L + P E + +F+EL LP+ LE LK+++NR K+V + ++ M L AP+ + + +++ + D +V L++P Sbjct: 1 AADAAGAAVLAGLLAGQRRLLVDVRDAEL--SKP----EQLVQFLELTILPVAAGLEGLKSKRNRLKLVFPKVSQLLEYRKTMALAAPEVVALSTMDFDPIESHDNLVVLLAP 107
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A7R9WGC7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGC7_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.270e-12 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRV 369 DAAD+AGA ++AA++ G++R++V+V DA+L PD + +F+EL LP+ LE LK+ +NR K+V Q + M L AP+ + + +L VAK D + Sbjct: 233 DAADSAGASILAAMLAGKQRMLVDVRDAELT-RDPDI----LVQFIELAILPVAAGLEGLKSERNRVKIVFPTVSQLLQYRRTMALAAPEVVALSTLGFDPVAKQDNL 335
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: B7G626_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G626_PHATC) HSP 1 Score: 74.3 bits (181), Expect = 4.040e-12 Identity = 53/185 (28.65%), Postives = 90/185 (48.65%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSPGNWKGKKGKHLRRVLAEAHDAAIILINPTDPDKF------------LRPADYNA--FESVYHLSPMRVNYL 558 +AADAAG+ ++A ++ G++R++V+V DA+L + E + +F+EL LP+ LE LK+++NR K+V ++ M L AP+ + + + V K D +V +V+P E A L++PTDP++ + P FE YHL + V Y+ Sbjct: 228 EAADAAGSAILAMMLGGKQRMLVDVRDAELSRDP-----ETLVQFIELAILPVAAGLEGLKSQRNRLKIVFPTVSQLLVYRKTMALAAPEVVALSTFGLEPVEKQDNLVVIVAPSPDD-----------EEGLMAMNELLHPTDPNRISIKQPVVILNHHMVPISGPVADFEVAYHLRLLSVQYM 396
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Match: A0A1Z5JP22_FISSO (DUF1995 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP22_FISSO) HSP 1 Score: 71.2 bits (173), Expect = 4.450e-11 Identity = 38/114 (33.33%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 46 DAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPDFCHEAMAEFVELLTLPLTTALENLKARQNRCKVVIQGTRHAAQVKEAMVLDAPDSLQVVSLEEGHVAKTDRVVALVSP 387 +AADAAGA ++A L+ G++R+IV+V DA L + + +F+EL LP+ LE LK+++NR K+V ++ M L AP+ + + +L V D ++ +++P Sbjct: 179 EAADAAGASILAGLLGGKQRMIVDVRDADLANDV-----NTLVQFLELAVLPVAAGLEGLKSKRNRLKLVFPTVGQLLHYRKTMALAAPEVVALSTLGLDPVEDRDNLIVIIAP 287 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2154.6592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2154.6592.1 >prot_L-elsbetiae_contig2154.6592.1 ID=prot_L-elsbetiae_contig2154.6592.1|Name=mRNA_L-elsbetiae_contig2154.6592.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp FEPRLEQQRPPKTNQDAADAAGAGVVAALMEGRRRLIVEVDDAQLRYNSPback to top mRNA from alignment at L-elsbetiae_contig2154:2465..4921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2154.6592.1 ID=mRNA_L-elsbetiae_contig2154.6592.1|Name=mRNA_L-elsbetiae_contig2154.6592.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2457bp|location=Sequence derived from alignment at L-elsbetiae_contig2154:2465..4921- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2154:2465..4921- >mRNA_L-elsbetiae_contig2154.6592.1 ID=mRNA_L-elsbetiae_contig2154.6592.1|Name=mRNA_L-elsbetiae_contig2154.6592.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig2154:2465..4921- (Laminarionema elsbetiae ELsaHSoW15)back to top |