mRNA_L-elsbetiae_contig2152.6588.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: D7FKX5_ECTSI (Amidohydro-rel domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX5_ECTSI) HSP 1 Score: 200 bits (509), Expect = 5.470e-63 Identity = 91/108 (84.26%), Postives = 101/108 (93.52%), Query Frame = 1 Query: 10 QGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGVIDEAAWEQLLALAEYPQVFVKTSALFRVA 333 QGFCGVRFNPYLWPEGGEGMKD+TG+AL+RKAGEL PVGVMCFKGFGRHVEEI+ LL SSPQTKLV+DHFGFFLQDG IDE AW+Q+LAL++YP VF+KTSALFRVA Sbjct: 60 QGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKLVVDHFGFFLQDGEIDETAWKQVLALSKYPSVFIKTSALFRVA 167
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A835YUE6_9STRA (Amidohydro-rel domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE6_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.430e-44 Identity = 69/111 (62.16%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 1 MRCQGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGVIDEAAWEQLLALAEYPQVFVKTSALFRVA 333 ++ QGFC VRFNPYLWPEG +GM ++ G +Y+KAGEL PVG MCFKG RH +I LL +PQT+ +IDHFGFF Q+GV ++ +W+QLLALA+YPQV+VKTSA FRV+ Sbjct: 58 LQRQGFCSVRFNPYLWPEG-QGMSNDFGRQVYKKAGELKMPVGFMCFKGLRRHYSDITALLQCAPQTQAIIDHFGFFRQEGVTEDESWQQLLALAQYPQVYVKTSAFFRVS 167
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A812UFK1_9DINO (LigI protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UFK1_9DINO) HSP 1 Score: 134 bits (337), Expect = 3.720e-37 Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1 Query: 22 GVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQ------DGVIDEAAWEQLLALAEYPQVFVKTSALFRVA 333 GVRFNPY WP G + M D+TG AL+RKAGEL+ PVG M FKG +HVE+I+ L+ SSP T+++IDH+GFFLQ + +DEA+WE LL L+ YPQV VK SALFRV+ Sbjct: 38 GVRFNPYKWPAG-QSMADDTGKALFRKAGELSLPVGFMPFKGLSQHVEDIEALMKSSPSTQVIIDHWGFFLQPATGFGERALDEASWEALLRLSSYPQVHVKISALFRVS 146
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A1Q9D3S2_SYMMI (2-pyrone-4,6-dicarbaxylate hydrolase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D3S2_SYMMI) HSP 1 Score: 131 bits (329), Expect = 3.230e-36 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 10 QGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGV------IDEAAWEQLLALAEYPQVFVKTSALFRVA 333 +G+ GVRFNPY WP G + M D TG AL+ KAGEL PVG M FKG +HVE+I+ L+ SSP+T+++IDH+GFFLQ +DEA+W+ LL L+ YPQV VK SALFRV+ Sbjct: 58 KGWVGVRFNPYKWPAG-QSMADATGKALFGKAGELRLPVGFMPFKGLSQHVEDIEALMKSSPETQVIIDHWGFFLQPATGFGERSLDEASWDALLKLSAYPQVHVKISALFRVS 170
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A812XUJ4_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812XUJ4_9DINO) HSP 1 Score: 131 bits (329), Expect = 1.110e-34 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 1 Query: 10 QGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGV------IDEAAWEQLLALAEYPQVFVKTSALFRVA 333 +G+ GVRFNPY WP G + M D TG AL+ KAGEL PVG M FKG +HVE+I+ L+ SSP+T+++IDH+GFFLQ +DEA+W+ LL L+ YPQV VK SALFRV+ Sbjct: 162 KGWVGVRFNPYKWPAG-QSMADATGKALFGKAGELRLPVGFMPFKGLSQHVEDIEALMKSSPETQVIIDHWGFFLQPATGFGERSLDEASWDALLKLSAYPQVHVKISALFRVS 274
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A7S2CKL7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CKL7_9STRA) HSP 1 Score: 125 bits (313), Expect = 2.180e-33 Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 10 QGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGVIDEAAWEQLLALAEYPQVFVKTSALFR 327 +GF GVRFNP LWPEG E M ++ G ++++KAG L PVG+MCFKG H+ +I+ LL+ P+TK +IDH GF QD + +++WE+L LA+YPQV+VK SA R Sbjct: 60 EGFVGVRFNPSLWPEG-ETMSNKVGSSMFKKAGNLGMPVGIMCFKGLDPHLADIEALLSEHPKTKCIIDHMGFMYQDDTVLDSSWEKLHKLAKYPQVYVKVSAFAR 164
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A7S2RW45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW45_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.310e-32 Identity = 58/109 (53.21%), Postives = 74/109 (67.89%), Query Frame = 1 Query: 1 MRCQGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGVIDEAAWEQLLALAEYPQVFVKTSALFR 327 M G GVRFNPYLWPEG E + +E G A + KAG+L VG+MCFKGFG H EI+ L+ P TK +IDH GF+ Q+GV+ E +E+LL L +P V++K SA FR Sbjct: 171 MATSGIVGVRFNPYLWPEG-EKINNEVGAAAFEKAGDLGMAVGIMCFKGFGLHAAEIEDLVARFPNTKCIIDHMGFYRQNGVVAEEDFERLLELERFPNVYIKASAFFR 278
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A4D9D9W7_9STRA (Amidohydro-rel domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9W7_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.440e-32 Identity = 64/128 (50.00%), Postives = 79/128 (61.72%), Query Frame = 1 Query: 1 MRCQGFCGVRFNPYLWPEG-----------------GEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGVIDEAAWEQLLALAEYPQVFVKTSALFRVA 333 ++ QGF VRFNPY+WP G G+GM + TG ALY +AG PVG M FKG H+ E++ LL SPQT++VIDH+GFF Q G + AW LL+LAEYPQV VK SA FRV+ Sbjct: 116 LQSQGFNSVRFNPYIWPAGEKVRRENKGGERHRRGEGKGMDNPTGRALYAEAGRRTMPVGHMLFKGLHLHLPEVQALLNLSPQTRVVIDHWGFFHQQGRLVPEAWAALLSLAEYPQVHVKISAFFRVS 243
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A6T1Z3Z2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T1Z3Z2_9EUGL) HSP 1 Score: 123 bits (308), Expect = 8.240e-32 Identity = 65/117 (55.56%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 10 QGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQD---------GVIDEAAWEQLLALAEYPQVFVKTSALFRVA 333 QGF VRFNP L+P+G + G AL+ KAGEL PVG+MCF GF I+ L+ SSP T +VIDH+GFF Q GV DE AWE+LLALA+YPQV+VK SALFRV+ Sbjct: 124 QGFVAVRFNPALFPDG---LDSPVGKALFEKAGELVLPVGIMCFSGFTAQAPAIEALMKSSPDTTVVIDHWGFFRQPATGGLLGDAGVNDEEAWEKLLALAQYPQVYVKVSALFRVS 237
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Match: A0A7S1Z3V0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3V0_TRICV) HSP 1 Score: 122 bits (306), Expect = 2.190e-31 Identity = 64/113 (56.64%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 1 MRCQGFCGVRFNPYLWPEGGEGMKDE--TGIALYRKAGELNCPVGVMCFKGFGRHVEEIKTLLTSSPQTKLVIDHFGFFLQDGVIDEAAWEQLLALAEYPQVFVKTSALFRVA 333 + G+ GVRFNPYLWPEG + M +E G+A+Y++ GEL PVGVMCFKG H ++I L+ SSP T L++DH GF D D AA+EQLL+LA+YP V VK SALFRVA Sbjct: 152 LTLDGYVGVRFNPYLWPEGAK-MSEEGGCGLAVYKRCGELKMPVGVMCFKGLELHYDDIVRLIESSPDTALILDHLGFTGLDERGD-AAFEQLLSLAKYPNVVVKVSALFRVA 262 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2152.6588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2152.6588.1 >prot_L-elsbetiae_contig2152.6588.1 ID=prot_L-elsbetiae_contig2152.6588.1|Name=mRNA_L-elsbetiae_contig2152.6588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp MRCQGFCGVRFNPYLWPEGGEGMKDETGIALYRKAGELNCPVGVMCFKGFback to top mRNA from alignment at L-elsbetiae_contig2152:19794..20694- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig2152.6588.1 ID=mRNA_L-elsbetiae_contig2152.6588.1|Name=mRNA_L-elsbetiae_contig2152.6588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=901bp|location=Sequence derived from alignment at L-elsbetiae_contig2152:19794..20694- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig2152:19794..20694- >mRNA_L-elsbetiae_contig2152.6588.1 ID=mRNA_L-elsbetiae_contig2152.6588.1|Name=mRNA_L-elsbetiae_contig2152.6588.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=666bp|location=Sequence derived from alignment at L-elsbetiae_contig2152:19794..20694- (Laminarionema elsbetiae ELsaHSoW15)back to top |