mRNA_L-elsbetiae_contig2151.6585.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2151.6585.1
Unique NamemRNA_L-elsbetiae_contig2151.6585.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: D7G6L9_ECTSI (BNR repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6L9_ECTSI)

HSP 1 Score: 1236 bits (3199), Expect = 0.000e+0
Identity = 588/670 (87.76%), Postives = 627/670 (93.58%), Query Frame = 1
Query:    1 MRRKKKKNKEPEQDGRVVNAFTWGTGEGGQLGYGVDTPISQDVPRPAFPIGAVQGQHVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKALRVKDLREYRGFINAYKKGGIMVYDALKKTMEKQKLNPDWLDTPLEYFPGQPGMTEAECRLGTAEPHMDWCMDTAPPGKDVFDSLRGGHEIVYVCRPCHRDRVCLACARKCHSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMRERWRTITAAGATPGNPALGEDGCLHPSELRELLQVVRGGAAFVTSDDVDDGLAQLTHGGEKERIDYLPFERWYEEHFSKIDAELDDG 2010
            M+R+KKK KEP+ DGRVVNAFTWGTG+GGQLGYG+D PI+Q+VPRPAFPIGA+ G+HVV AAAGGRHSLFLLE GEVLACGVWDDGQLG  DRP+VL PGS EEMV VPKSLVPRGSETFPVPVQVP KL+VKEL+AGFASSFLVTDFGEVWSWGSGKFGCLGLGD+ESRWFPSRIPLFAE+QPATAET+SAGKWHVLCLT KTHEVYAWGRNNWGQ      LGTGE G  ERSPV +RWTK+ETPL++ AGA+HS+A+VD LRPN RRDIVAYAWG PDHGRLGSERQQTHASPMEVEDLT ALRKLKRTI G+SAGGTH+LAVLGSGEVAAWGGG YGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVD+AGTQVWGWGFNRWGELGGG +SVRLQP RVGGL+GCTVQ +VAGERHTIA+TNGKALRVKDL +YRGFINAYKKGG+MVYDALKKTMEKQKLNPDWLDTPLE+FPGQPGMT AECRLGTAEPHMDWCMDTAPPGKDVFDSLRGGHEIVYVCRPC RDRVCLACARKCHSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMRE +R +TA+G TPGNPALG+DG LHPSELRELLQ+VRGGAAFVTSDDVD+GLA LT GGEKERI YLPFERWYEEHFSKIDAELD+G
Sbjct:    1 MQRRKKKAKEPKDDGRVVNAFTWGTGDGGQLGYGLDIPIAQNVPRPAFPIGALAGRHVVRAAAGGRHSLFLLECGEVLACGVWDDGQLGCMDRPVVLVPGSTEEMVSVPKSLVPRGSETFPVPVQVPPKLIVKELAAGFASSFLVTDFGEVWSWGSGKFGCLGLGDDESRWFPSRIPLFAENQPATAETVSAGKWHVLCLTQKTHEVYAWGRNNWGQ------LGTGEAGECERSPVAIRWTKRETPLKISAGADHSVAMVDLLRPNQRRDIVAYAWGNPDHGRLGSERQQTHASPMEVEDLTHALRKLKRTIAGVSAGGTHTLAVLGSGEVAAWGGGMYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDMAGTQVWGWGFNRWGELGGGDESVRLQPYRVGGLDGCTVQHVVAGERHTIALTNGKALRVKDLGDYRGFINAYKKGGLMVYDALKKTMEKQKLNPDWLDTPLEFFPGQPGMTSAECRLGTAEPHMDWCMDTAPPGKDVFDSLRGGHEIVYVCRPCKRDRVCLACARKCHSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMREHFRAMTASGVTPGNPALGDDGLLHPSELRELLQIVRGGAAFVTSDDVDEGLALLTQGGEKERIGYLPFERWYEEHFSKIDAELDEG 664          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A7S1TNR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNR9_9STRA)

HSP 1 Score: 283 bits (724), Expect = 2.520e-81
Identity = 205/660 (31.06%), Postives = 307/660 (46.52%), Query Frame = 1
Query:   55 NAFTWGTGEGGQLGYGVDTPISQDVPRPAFPIGAVQGQHVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPS--------RIPLFAESQPAT------AETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFR---------LGTGETGAS-ERSPVTVRWTKQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHA-SPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLG-SGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAV----------------------------DLAGTQ--VWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKALRVKDLREYRGFINAYKKGGIMVYDALKKTMEKQKLNPDWLDTPLEYFPGQPGMTEAECRLGTAEPHMDWCMDTAPPGKDVFDSL-RGGHEIVYVCRPCHRDRVCLACARKCHSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMRERWRTITAAGATPGNPALGEDGCLHP-SELRELLQVVR 1860
            N+  +G  E G +G        Q +P P F +G +    V  AA G  H+LF L +G VLACG  +DGQLG  +  L       E+  P P   V      +           +K ++   ASSF ++  G+V++WGSG++G LGLGD E R+ P         R P   +S+  T         I+AG WH       T  +++WGR++ GQ               +   E G   +  P  + + K E    V  GAEH++ALV+  R N +  + AY WG  + GRLG+     +   P EV  L   LR  +  +  ++AGG H+L ++  +G++  WG G YG +G G  WD  +      ++    +  G  HS AL                              + A TQ  VW WGFN +GELG G   VRLQP R+  ++   V  + AG+RH+I +T G A +V+D  +Y+ + +   + GI+VY+ LKKTM+ + LNP +LD P    PGQPG  + +C     +P   +C +T P   D  D++ RG +   Y         VC+AC R+CH+    E  FR       CDC  +   C   W+P+R+ +       A P      EDGC+   +++ +LL + +
Sbjct:   37 NSMKFGPDEEGPMGR-------QLLPHPCFSLGRLDSMAVKHAAGGAFHTLFALANGNVLACGRNEDGQLGVGEEDL------REKWYPTPTHGVISDKYVY-----------IKMVACAEASSFAMSATGDVYAWGSGRYGVLGLGDTEHRYTPVCVNEAEGLRDPTDRKSRWRTPLWRQRVTKIAAGDWHACVYLGDTERLFSWGRDHEGQLGRGAPFTRSMIHPDIEVQEPGDRFDALPGEIDFMKTEVCKGVDCGAEHTVALVEVERVNGKTQVTAYTWGNAEDGRLGAGADPANRHKPQEVTGLRDLLRAYRLNLQDVAAGGWHTLCLVEKNGQLIGWGRGMYGAVGYGKNWDVADPTPIPLVRAADKIVCGHNHSMALVGRGEISTEETRXXXXXXXXGERPEPRGPDEDAATQEGVWVWGFNNYGELGLGDTDVRLQPARLSPMQRAKVVDIAAGKRHSIVLTMGLARKVRDEPDYKPYFDTLMQEGILVYEILKKTMKSKGLNPRYLDQPNLILPGQPGAEDRDCPPAALDPTYRYCYNTKPG--DADDAMHRGVYRTEYRIPSLGMRSVCMACIRRCHATRHAEAVFRKHRPGDFCDCGASEH-CRAAWTPLRDVFDRF----ADP------EDGCIEIYTQMEQLLNLCK 659          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A7S3JYD7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYD7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.130e-75
Identity = 176/546 (32.23%), Postives = 255/546 (46.70%), Query Frame = 1
Query:  445 GEVWSWGSGKFGCLGLGDEESRWFPSRIPL--FAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWT----KQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITG----------LSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGT---------QVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKALRVKDLREYRGFINAYK-KGGIMVYDALKKTMEKQKLNPDWLDTPLEYFPGQPGMTEAECR-LGTAEPHMDWCMDTAP---PGKDVFDSLR-GGHEIVYVCRPCHRDRVCLACARKCHSKHCIEPAF-RLRDGSKPCDCSTTPGMCACKWSPMRERWRTITAAGATPGNPALGEDGCLHPSELRELLQVVRGGAAFVTSDDVDDGLAQLTHGGEKERIDYLPFERWYEEHFSK 1986
            GE+++WGSG++G LG GDE++   P+++P+     ++      IS G+WH + L+     +Y WGRN+ GQ      LG    G +  SP  +       +Q +   + AGA H + + DR R    +D +AYAWG  +  RL     +   +P  V  L+  L++ +  +            +  GG H+L     G++ AWG G +GQLG G  WDR + V+   L GV  ++AG+RHS A+    A T         +V+ WGF  WGELG G   V L P +V GL+        AG+RHTI +T G+AL  +    Y   I   +  GG  +   L+  +    LNP  LD P +  PGQPG+ E  C      EP   +C+DT P   P   V  S R   +E V  C PC   R+C AC R+CH  HC+ P F R   GS  C C    G C  KWS  R  +  +           +  D   H   L +LL         +T DD D   A +        I++  F +W+  +F++
Sbjct:    1 GELFAWGSGRYGALGFGDEQNYNKPTQVPMNNLGLNKKCRVRRISCGRWHCILLSSVEGNLYGWGRNHKGQLG----LGVEAVGQNIYSPTLIELEPCDRRQPSIRDIAAGAIHCVVIADRYRGKKEKDTLAYAWGDTNDSRLADANPKKFHTPQVVPALSLLLKQRRLLLAKAPCDPGDSPIIVCGGGHTLVRTNFGQLIAWGAGSHGQLGYGEQWDRQDCVLIPDLYGVIDMAAGSRHSVAIVGLDAQTDHQSNTRNGRVFTWGFGYWGELGQGDFEVHLLPTQVRGLDQSVAIACAAGDRHTIVLTTGRALSYRQDSRYADTIEILEHSGGRPLESQLRNQLTDAGLNPSALDDPDQPEPGQPGVEEKTCLPRPLPEPATRYCLDTIPSVDPNDLVMRSARRASYETVATCNPCKIQRICRACIRRCHHGHCLVPDFCRWAPGSDQCGCLRN-GHCKAKWSAERAIFDNLVDQTHPSAEETISLDQLDH---LLDLLHPDEN----LTEDDYDS--AHVALRSSSRYINWFQFNKWHTPYFAE 532          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A836CAC7_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC7_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.700e-74
Identity = 177/519 (34.10%), Postives = 266/519 (51.25%), Query Frame = 1
Query:   46 RVVNAFTWGTGEGGQLGYGVDTPISQDVPRPAFPIGAVQGQHVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYK--------DRPLVLSPGSAEEMVPVPK---------------------------SLVPRGSETFPVPVQV-PAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQ-ETPLQVCAGAEHSIALVDRLRPNHRRDIV-AYAWGRPDHGRLGSERQQTHAS----PMEVEDLTQALRKLKRTITGLSAGGTHSLAVLG-SGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEG--CTVQQMVAGERHTIAITNGKALRVKDLREYRGFINAYKK-GGIMVYDALKKTMEKQKLNPDWLDTPLEYFPGQP 1464
            R+VN F+WG+   GQLG+G  + + Q +PRP F +G  +   V+ AA G RHSL LL++G VLA G  D+G+LG          D   V +P +                                    +  P     +P PV++      V+ L+ G A+S+ +T FG++++WG G++G LGLG E     P+R+ +    +P   + ++AG+ H + L  + +  YAWGRN+ GQ      +G G    +E +P  + W+   +TPLQ+  GA HS+ +V    PN +   +  Y WG    GRLG+   ++ A+    P+E+E +T  LRK  R +  ++AG  HS+AVL  + EV AWG G YGQLG+G        V   GL  V ++ AG RH+ A+    AG  ++ WG+N WGE G G  S    P  V GL     +V  + AG RHT+A+T+G+AL  +D   YR F +     GG +   AL++ M ++ L+ D L+ P    P QP
Sbjct:   19 RLVNVFSWGSAADGQLGHGDTSDVYQSLPRPIFSLGTAESGSVIAAAVGPRHSLLLLKNGFVLAMGAADNGRLGTAAPAASDSGDGLKVQAPSTVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPMRQHNYPAPVRLLQPSHKVRALACGGAASYALTAFGDLYAWGCGRYGALGLGHEADAHAPTRVAIALSGRPLPIKAVAAGRSHCVVLA-EGNRAYAWGRNDRGQ------VGVGGGAHAEAAPRAMGWSPATQTPLQIACGAHHSLCVVAVKAPNRKAAALRVYGWGDAGDGRLGAAAARSGAAFVDRPVEMEAVTALLRKSGRAVVAVAAGSAHSMAVLDVTREVIAWGQGLYGQLGEGSNRSTDIPVYVRGLSDVVTLVAGDRHNAAIC---AGGALYTWGWNNWGEAGVGTCSCLQTPKEVLGLAAYNTSVLSVAAGGRHTVALTSGRALLARDSPAYREFQDTLAAPGGYVARGALREAMRRRDLDSDLLERPSAPLPRQP 527          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A812V1E0_SYMMI (PRAF1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1E0_SYMMI)

HSP 1 Score: 195 bits (495), Expect = 1.950e-51
Identity = 149/484 (30.79%), Postives = 224/484 (46.28%), Query Frame = 1
Query:  445 GEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRW--TKQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLGS-GEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDLAGTQ----VWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKALRVKDLREYRGFINAYKKGGI-MVYDALKKTMEKQKLNPDWLDTPLEYFPGQPGMTEAECRLGTAEPHMDWCMDTAPPGKDVFDSL---RGGHEIVYVCRPCHRDRVCLACARKC-HSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMRERWRTITAAGATPGNPALGEDGCLHPSELRELLQVVR 1860
            G ++S+G GKFG LG GDEE+   P ++      Q    + ++ GK+H LC T+   ++++WGRN  GQ      LG G     E +P  V    T +E  L +  G  HS+A+V   R ++  +   Y WG  + G+L S                                G H++ ++G   +V  WGGG YGQLGDG  WD P   +   ++ V  +SAG RHS A+   + G      VW WG N +G+LG G   +RL P  +       V  + AG+RHT+ +T+ K L  +D    R F    ++G   +V   L   +++  ++   LD P +    Q G +E E      E  + +CMDT    ++    L   R G E  Y C       VC+ACAR+C  S+       + R+ S  CDC T+ G C C W+ +RE+   +    A  G P    DG + P  +R++L  +R
Sbjct:   31 GNLFSFGLGKFGILGHGDEETWQLPRQV---MSLQRHRVKQVALGKFHALCTTY-AGKLFSWGRNEKGQ------LGRGHKSPMEVTPGLVADINTDREHTLDIACGLAHSLAIVRMKRRDNSVNDYVYGWGDYECGQLSS--------------------------------GFHNMLLVGPVRQVITWGGGLYGQLGDGFAWDNPRPQVVPNVKNVLQMSAGMRHS-AVVAGVGGLDGIPDVWVWGDNMYGQLGLGDLDIRLSPTIMTACRRMRVTGVSAGDRHTVFVTSHKPLVARDNPMLRDFFRILEEGASRLVRHRLGLELKRNGMDASLLDDPNKVMVDQAGKSEREICNEEFEVGLKYCMDT----RESLPQLQWRRKGLECAYECPALGLKAVCMACARRCVKSRKLFLYLRKRRNKSDVCDCRTS-GNCTCAWTLVREKIDRVVEE-AVDGRPT---DGMIGPDSVRKVLVALR 462          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: UPI00178AA6D0 (Ig-like domain repeat protein n=1 Tax=Actinopolymorpha pittospori TaxID=648752 RepID=UPI00178AA6D0)

HSP 1 Score: 160 bits (404), Expect = 6.460e-38
Identity = 143/415 (34.46%), Postives = 183/415 (44.10%), Query Frame = 1
Query:   58 AFTWGTGEGGQLGYGVDTPISQDVPRPAFPIGAVQGQHVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQETPLQVCAGA-EHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQGVR--SVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAI 1293
            A  WG    GQLG G  T  +  V   A P    +G  V   +AG RH L L   G VLA G   +GQLG          G+               + T PV V +P  + V ++SAG   S  VT  G V +WGS  +G LG G   +R     + L    +  T   +SAG +H L +T     V AWG N  G+      LG G T     +PV V   +  T  QV AG  E S+A+    R          AWG   +G LG       A+P+E   L + +     T+T +SAG  HS+AV   G V AWGG  YGQLGDG   DR   V     +GV    VSAG    +  A    G   WGW  +  G+LG G  + R  P  V   EG  V Q+ AG  H++A+
Sbjct:   29 ALAWGYNTAGQLGDGTTTNRTTPV-ETALP----EGVTVTQISAGDRHGLALTSDGRVLAWGSNSNGQLGD---------GTTT-------------NRTTPVEVALPEGVTVTQVSAGSFHSLAVTSDGRVLAWGSNVYGQLGDGTTTNRTTTVEVAL---PEGVTVTQVSAGSFHSLAVT-SDGRVLAWGYNGRGE------LGDGTT-TDRTTPVEVALPEGVTVTQVSAGVNEFSLAVTSEGR--------VLAWGHNGYGPLGDGTTTDRATPVETA-LPEGV-----TVTQVSAGFDHSIAVTSDGRVLAWGGNHYGQLGDGTTTDRTTPVEVALPEGVTVTQVSAGVHRFSLTATSDGGVLAWGWNVD--GQLGDGTTTDRTTPVEVALAEGVIVTQISAGGLHSLAL 389          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A4Z0HIA0_9ACTN (DUF11 domain-containing protein n=2 Tax=Streptomyces palmae TaxID=1701085 RepID=A0A4Z0HIA0_9ACTN)

HSP 1 Score: 148 bits (374), Expect = 1.310e-33
Identity = 138/417 (33.09%), Postives = 188/417 (45.08%), Query Frame = 1
Query:   61 FTWGTGEGGQLGYGVDTPISQDVPRPAFPIGAVQGQHVVDAAAGGRH--SLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAET-ISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAG-GTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESVMATGLQGVRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAI 1293
             TWG    GQLG G  TP +Q  P    PI A   + V   A  G +  S+ L  +G+VLA G  D GQLG          G+  +              T PV V +PA   V  ++ G      +T  GEV +WG  ++G LG G   +    S +P+       T  T IS G  H L LT  T EV AWG N+ GQ      LG G T  +   PV V      T   +  G +HS+AL               AWG   +G+LG+    + + P+ V      L      +T L+AG G  S A+L +G+V AWG   YGQLGDG    R  P  V+      V ++++G  H+ A     A  ++  WG+NR+G+LG G  + R QP  V   EG TV  +  G  H++A+
Sbjct:  158 LTWGRNTYGQLGNGTTTPSTQ--PGSTVPIRADLPEGVTATAVSGGYGFSVALTSTGQVLAWGQNDVGQLGD---------GTFTD-------------STTPVEVDLPAGTTVTAIATGDDHVLALTSSGEVLAWGYNEWGQLGNG---TIGVDSNVPVSVHLPAGTTVTAISCGAGHSLALT-STGEVLAWGDNDLGQ------LGDGTT-VNRDEPVEVSLPAGTTATAIAGGDDHSLALTSTGE--------VLAWGYNAYGQLGNGTTTSSSLPVTV------LLPAGADVTSLAAGHGFQSFALLSTGQVLAWGDNTYGQLGDGTTTRRTAPVQVLLPAGTQVTALASGDDHTIAAT---ASGRLLSWGYNRYGQLGDGTTTNRAQPEEVELPEGTTVTAVGTGNYHSLAV 522          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A699YU27_HAELA (UV-resistance 8 protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YU27_HAELA)

HSP 1 Score: 140 bits (354), Expect = 1.140e-32
Identity = 125/393 (31.81%), Postives = 183/393 (46.56%), Query Frame = 1
Query:  169 HVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTK----QETP------LQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQG--VRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKAL 1311
            ++V  AAG  HSL L + G V + G  +DGQLG+     V SP +   ++     +V  G+E                       S  V+   EVWSWG G FG LG G+   ++ P  I  F+       + ++ G  H L +T    E++ +GRN  GQ      LG G T   + SP  V   +    Q  P        V  GAEHSIA   + +      +  + WGR  +G LG+ + +    P      T A+      I+ ++ G  HS+AV   G + A+G G YGQLG G   D+P +     LQG  V  V  G RH+  LA D +G+ +WGWG+N++G+LG G    R  P  V  L+G  +  + +G RH++A+T   A+
Sbjct:    5 YIVCIAAGASHSLALTDCGIVASWGKGEDGQLGHGSSAEVSSPQAVSSLLGKDICIVRCGAEY----------------------SLAVSKAHEVWSWGWGDFGRLGHGNTTDQFLPKPITFFSGM---IIKEVTCGDTHTLVVTDMG-ELFTFGRNQNGQ------LGLGHT-EDQLSPQRVEALQVRSMQNWPGHGHCVASVAGGAEHSIAATSQGK------VFGWGWGR--YGNLGTGQLEDKLVP------TPAIALDAVHISKVNCGWRHSVAVSNHGVLYAFGWGKYGQLGHGDNTDQPTATPVAALQGKVVVEVVGGWRHT--LATDSSGS-LWGWGWNKFGQLGLGDTVDRNTPCLVASLDGSGISLLASGWRHSLAVTQAGAV 347          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A499QMX1_HAELA (UV-resistance 8 protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A499QMX1_HAELA)

HSP 1 Score: 142 bits (359), Expect = 1.450e-32
Identity = 123/383 (32.11%), Postives = 180/383 (47.00%), Query Frame = 1
Query:  169 HVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDRPESVMATGLQG--VRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKAL 1311
            H+V  AAG  HSL L + G V + G  +DGQLG+     V SP +   ++     +V  G+E                       S  V+   EV+SWG G FG LG G+   ++ P  I  F+       + ++ G  H L +T    E++ +GRN  GQ      LG G T   + SP  V   +      V  GAEHSIA   + +      +  + WGR  +G LG+ + +    P      T A+      I+ ++ G  HS+AV   G +  +G G YGQLG G   D+P +     LQG  V  V  G RH+  LA D +G+ ++GWG+N++G+LG G    R  P  V  L+G  V  + +G RHT+A+T   A+
Sbjct:    5 HIVCIAAGASHSLALTDCGIVASWGRGEDGQLGHGSSAEVSSPQAVSSLLGKDICIVRCGAEY----------------------SLAVSKAHEVYSWGWGDFGRLGHGNTTDQFLPKPITFFSGM---IIKEVTCGDTHTLVVTDMG-ELFTFGRNQNGQ------LGLGHT-EDQLSPQRVEALQGHCVASVAGGAEHSIAATSQGK------VFGWGWGR--YGNLGTGQLEDKLVP------TPAIALDAVHISKVNCGWRHSVAVSNHGVLYTFGWGKYGQLGHGDNTDQPTATPVAALQGKVVVEVVGGWRHT--LATDSSGS-LYGWGWNKFGQLGLGDTVDRNTPCLVASLDGSGVSLLASGWRHTLAVTQAGAV 337          
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Match: A0A542XK27_9ACTN (Alpha-tubulin suppressor-like RCC1 family protein n=1 Tax=Salinispora arenicola TaxID=168697 RepID=A0A542XK27_9ACTN)

HSP 1 Score: 143 bits (360), Expect = 1.680e-32
Identity = 140/419 (33.41%), Postives = 185/419 (44.15%), Query Frame = 1
Query:   61 FTWGTGEGGQLGYGV----DTPISQDVPRPAFPIGAVQGQHVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPGSAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGEVWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCLTHKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQETPLQVCAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVEDLTQALRKLKRTITGLSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWDR--PESV-MATGLQGVRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGGDSVRLQPNRVGGLEGCTVQQMVAGERHTIAIT 1296
              WG  + G+LG G     DTP+  D+P          G  V D AA G HSL L  +G VLA G    GQLG          G+  +                PV V +PA   V  ++AG   S  +T  G V +WG    G LG G    R  P  + L A ++      I+ G  H L +T     V AWG+N+ G+      LG G T     +PV V          V A  +HS+AL               AWGR   G+LG        +P++V DL          +T ++AG +HSLA+  +G V AWG    GQLGDG   DR  P  V + TG+  V +++ G  HS  LAV  AG  V  WG N  G+LG G  + R  P  V    G TV  + AG+ H++A+T
Sbjct:   60 LAWGQNDDGELGDGTTTDRDTPVDVDLPA---------GTEVTDVAAVGDHSLALTSAGTVLAWGDNSSGQLGD---------GTTTD-------------RDTPVDVDLPAGTEVTAIAAGDDHSLALTSAGTVLAWGGNFSGQLGDGTTTDRDTPVDVDLPAGTE---VTAIAGGDDHSLAVT-SAGTVLAWGQNDDGE------LGDGTT-TDRDTPVDVDLPAGTEVTAVAAHGDHSLALTSAG--------TVLAWGRNSSGQLGDGTTTDRDTPVDV-DLPAGTE-----VTAIAAGDSHSLALTSAGTVLAWGNNSSGQLGDGTTTDRDTPADVDLPTGVT-VTAITGGNDHS--LAVTSAGA-VLAWGNNPSGQLGDGTTTDRDTPADVDLPTGVTVTAIAAGDDHSLALT 418          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2151.6585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6L9_ECTSI0.000e+087.76BNR repeat domain protein n=2 Tax=Ectocarpus TaxID... [more]
A0A7S1TNR9_9STRA2.520e-8131.06Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3JYD7_9STRA1.130e-7532.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A836CAC7_9STRA1.700e-7434.10Regulator of chromosome condensation 1/beta-lactam... [more]
A0A812V1E0_SYMMI1.950e-5130.79PRAF1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
UPI00178AA6D06.460e-3834.46Ig-like domain repeat protein n=1 Tax=Actinopolymo... [more]
A0A4Z0HIA0_9ACTN1.310e-3333.09DUF11 domain-containing protein n=2 Tax=Streptomyc... [more]
A0A699YU27_HAELA1.140e-3231.81UV-resistance 8 protein (Fragment) n=1 Tax=Haemato... [more]
A0A499QMX1_HAELA1.450e-3232.11UV-resistance 8 protein n=1 Tax=Haematococcus lacu... [more]
A0A542XK27_9ACTN1.680e-3233.41Alpha-tubulin suppressor-like RCC1 family protein ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2151contigL-elsbetiae_contig2151:16230..19517 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1238.0
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G6L9
KEGG koko:K10614
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
EggNOG free text desc.guanyl-nucleotide exchange factor activity
EggNOG OGsCOG5184@1,KOG1426@2759
EC2.3.2.26
COG Functional cat.DZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Ec32 ortholog descriptionRegulator of chromosome condensation, RCC1
Ec32 orthologEc-00_009930.1
Exons4
Model size2040
Cds size2040
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2151.6585.1prot_L-elsbetiae_contig2151.6585.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2151 16230..19517 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815878.8844798-CDS-L-elsbetiae_contig2151:16229..166791622815878.8844798-CDS-L-elsbetiae_contig2151:16229..16679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 16230..16679 +
1691683163.7138977-CDS-L-elsbetiae_contig2151:16229..166791691683163.7138977-CDS-L-elsbetiae_contig2151:16229..16679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 16230..16679 +
1622815878.894856-CDS-L-elsbetiae_contig2151:17178..173971622815878.894856-CDS-L-elsbetiae_contig2151:17178..17397Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 17179..17397 +
1691683163.7258565-CDS-L-elsbetiae_contig2151:17178..173971691683163.7258565-CDS-L-elsbetiae_contig2151:17178..17397Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 17179..17397 +
1622815878.9051561-CDS-L-elsbetiae_contig2151:17637..188521622815878.9051561-CDS-L-elsbetiae_contig2151:17637..18852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 17638..18852 +
1691683163.7352672-CDS-L-elsbetiae_contig2151:17637..188521691683163.7352672-CDS-L-elsbetiae_contig2151:17637..18852Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 17638..18852 +
1622815878.915939-CDS-L-elsbetiae_contig2151:19361..195171622815878.915939-CDS-L-elsbetiae_contig2151:19361..19517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 19362..19517 +
1691683163.7474036-CDS-L-elsbetiae_contig2151:19361..195171691683163.7474036-CDS-L-elsbetiae_contig2151:19361..19517Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2151 19362..19517 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2151.6585.1

>prot_L-elsbetiae_contig2151.6585.1 ID=prot_L-elsbetiae_contig2151.6585.1|Name=mRNA_L-elsbetiae_contig2151.6585.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=680bp
MRRKKKKNKEPEQDGRVVNAFTWGTGEGGQLGYGVDTPISQDVPRPAFPI
GAVQGQHVVDAAAGGRHSLFLLESGEVLACGVWDDGQLGYKDRPLVLSPG
SAEEMVPVPKSLVPRGSETFPVPVQVPAKLVVKELSAGFASSFLVTDFGE
VWSWGSGKFGCLGLGDEESRWFPSRIPLFAESQPATAETISAGKWHVLCL
THKTHEVYAWGRNNWGQASESFRLGTGETGASERSPVTVRWTKQETPLQV
CAGAEHSIALVDRLRPNHRRDIVAYAWGRPDHGRLGSERQQTHASPMEVE
DLTQALRKLKRTITGLSAGGTHSLAVLGSGEVAAWGGGGYGQLGDGHMWD
RPESVMATGLQGVRSVSAGARHSTALAVDLAGTQVWGWGFNRWGELGGGG
DSVRLQPNRVGGLEGCTVQQMVAGERHTIAITNGKALRVKDLREYRGFIN
AYKKGGIMVYDALKKTMEKQKLNPDWLDTPLEYFPGQPGMTEAECRLGTA
EPHMDWCMDTAPPGKDVFDSLRGGHEIVYVCRPCHRDRVCLACARKCHSK
HCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMRERWRTITAAGATPGNPA
LGEDGCLHPSELRELLQVVRGGAAFVTSDDVDDGLAQLTHGGEKERIDYL
PFERWYEEHFSKIDAELDDGVASSQAAAK*
back to top

mRNA from alignment at L-elsbetiae_contig2151:16230..19517+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2151.6585.1 ID=mRNA_L-elsbetiae_contig2151.6585.1|Name=mRNA_L-elsbetiae_contig2151.6585.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3288bp|location=Sequence derived from alignment at L-elsbetiae_contig2151:16230..19517+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGCGAAAAAAGAAGAAAAACAAGGAGCCCGAACAGGATGGGCGGGT AGTCAACGCCTTCACGTGGGGAACGGGCGAAGGCGGCCAGTTAGGATATG GTGTGGACACTCCAATTTCGCAGGACGTCCCTCGGCCGGCATTCCCGATC GGGGCGGTGCAGGGCCAGCACGTCGTCGATGCTGCCGCAGGAGGGAGGCA CTCGCTGTTCCTCCTCGAATCCGGCGAGGTTTTGGCCTGCGGCGTGTGGG ATGATGGGCAGCTTGGGTACAAGGACCGCCCCTTGGTGCTTTCCCCAGGA TCTGCAGAGGAGATGGTGCCGGTACCCAAGTCTCTCGTGCCGCGAGGGAG CGAGACGTTTCCCGTCCCAGTCCAGGTACCGGCAAAGCTGGTTGTGAAAG AGCTTTCGGCGGGGTTTGCGTCTAGCTTTCTGGTGACAGACTTTGGCGAG GTGAGTTCCAGCTGAAGTGTATCTATAGTCTAGTCTTTTAGACTATGTGT GCAGCTGATGCAATCAAAAGAACGGGCTATAGACTTACATACATGCGTCC GAGTAGTACGTGCAACGAACAGTTGGCTGGCTGTTTGGTACCAACCAGGT TTACAGCATACTGGCCACGCCACCCCGGAGAAAAGACAGGTGCCTAAGCG CTTTGTCGAATTTAGCGCCTGAGCTGCTGGTTGCTCCAACATACCTTTCC GACGTTCCCCTGGTTTACTCCCCGCACCGGTAAGAAGCGAGACCGCTCTT GGCAACGTAAACACGACAGCAACGACCTAACAACGTTCTACATCCCTATG TGTCATTGATCCTCAAACATGACCCCGGCGGGCCGTATGCTGTGCTTGTA CTAGGCACGGCCTCACTTCATATACAAAACGCCAATCGAACCGAAGACCA GCCCTCTTTGTACATTTTGGATGATGCACCACCACCTTTCGCGTCTCAGG TTTGGTCATGGGGGAGTGGCAAGTTCGGTTGCCTTGGCTTGGGCGACGAA GAGAGCCGATGGTTTCCCAGCCGCATCCCGCTATTCGCAGAAAGTCAGCC AGCCACGGCAGAGACAATCAGCGCCGGCAAGTGGCACGTGCTGTGCCTTA CCCACAAGACCCACGAAGTGTACGCATGGGGGCGCAACAACTGGGGGCAG GCAAGCGAGTCGTTTCGGGTCTGCGGTGCTTTGCCTCCGCTAAGAGCGTG ACTTTTGTTGGCACACTGCTGCTGTATTACTGAAGGAGGCATTCCATACT TCTTTATGTATGGAGAAAACCAACGTCCATTTGCATCGTTTTTTCTTCCG CGCAGCAGCCTCTATCTTCAGCTTTCCGGCACCAAATCTTGCGCGATTCG CACGTACGCTGTCGGACTCTTATTTATTTCTGCTCACTGACCTTCCAACA TGCCACAGCTCGGAACAGGAGAAACCGGTGCAAGCGAGCGGAGTCCCGTG ACGGTACGATGGACCAAACAGGAAACCCCGCTGCAGGTCTGCGCAGGAGC TGAGCACAGCATCGCCCTAGTGGACCGGTTGCGGCCGAACCACCGACGAG ACATCGTCGCCTACGCCTGGGGAAGACCCGACCACGGACGATTGGGCTCT GAGCGTCAACAAACGCACGCCTCGCCCATGGAGGTCGAGGACCTCACTCA AGCCCTCCGGAAGCTCAAGCGGACAATTACGGGCCTCTCGGCCGGCGGGA CTCATTCGCTGGCTGTGCTGGGCTCCGGGGAGGTAGCTGCGTGGGGTGGG GGCGGCTACGGGCAACTGGGGGACGGCCATATGTGGGACAGGCCAGAGTC GGTGATGGCGACCGGGTTGCAGGGAGTACGGTCAGTCAGCGCCGGCGCAA GGCACTCGACGGCTCTCGCCGTAGACCTTGCGGGCACGCAGGTGTGGGGC TGGGGCTTCAACCGGTGGGGGGAGCTGGGTGGCGGGGGCGACAGCGTTCG GCTGCAGCCGAACAGGGTCGGGGGGCTGGAAGGGTGCACGGTCCAGCAGA TGGTGGCCGGGGAGAGGCACACAATCGCCATCACGAACGGGAAGGCGCTC CGAGTGAAGGACTTGCGCGAATATCGAGGGTTTATCAACGCATACAAGAA GGGCGGGATCATGGTCTACGACGCCCTTAAGAAGACCATGGAGAAGCAGA AGCTCAATCCCGATTGGTTAGACACCCCCCTCGAGTATTTTCCCGGGCAA CCAGGCATGACCGAGGCCGAGTGTCGGCTGGGCACCGCAGAGCCACACAT GGACTGGTGCATGGACACGGCGCCACCGGGCAAGGATGTATTCGACAGCC TCCGAGGAGGACATGAGATAGTGTATGTCTGCCGTCCCTGCCACCGAGAT CGCGTGTGCCTCGCCTGCGCCAGAAAGTGCCATTCGAAGCACTGCATCGA GCCCGCCTTCCGTCTCAGAGACGGATCCAAGCCCTGCGACTGCAGCACCA CCCCCGGCATGTGCGCCTGCAAGTGGAGCCCCATGAGAGAACGCTGGCGA ACGATCACCGCCGCAGGAGCAACCCCGGGAAACCCGGCGTTGGGAGAGGA CGGGTGTCTGCATCCCTCAGAGCTGAGGGAGCTACTGCAGGTGGTTCGAG GAGGCGCGGCATTCGTTACCTCGGTACGTGATGGGTTGGGGCTGGGTTAA GCGCGACCGCAGAGGGAGATGATTTGGGCAAGAAATGCCGAAAAGTTCCA GAATACTGTAGCCTGACGGGCGTGCAAAATACGAAATACGCGATCGAGTG AAGCAGGCCTGTCGTGCTTTTATTGGAGATATGTTGCCCGCCTCGATCTT AAATCGGAAAACACGACACTTGTCCAGCGCTTTTGAAAGCTCTAAAACGG AAATAATGATTCCTGACAAATCAGCGTATATGTACATATATATTTAGCAC ATGCGCAAGATATGTACATAAGGAGTACAACACTGCCCACGCCCGATTCG ACCGGGGTCCCTAAAGGTGACGCCCCAATCGTTGTTTCCCCAGAGCCCTC TGCCTTTCCTGCTTACACTCGGGAACAACCAAAGGATCCTCCACCTGCAA ATAAGTGGAACTTGTACGCAATGGGGTAATCAAGATGCACCTCAAGCTCA TACCGAGAACGAATTCCCTCTCTTCGAACTAGGATGACGTGGATGACGGG CTGGCACAGCTCACCCATGGCGGAGAGAAGGAACGGATAGACTATCTGCC GTTCGAGCGCTGGTATGAAGAGCACTTTAGCAAGATCGACGCTGAGCTGG ATGACGGAGTGGCGAGCTCACAAGCCGCAGCAAAGTAA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2151:16230..19517+

>mRNA_L-elsbetiae_contig2151.6585.1 ID=mRNA_L-elsbetiae_contig2151.6585.1|Name=mRNA_L-elsbetiae_contig2151.6585.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4080bp|location=Sequence derived from alignment at L-elsbetiae_contig2151:16230..19517+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGCGAAAAAAGAAGAAAAACAAGGAGCCCGAACAGGATGGGCGGGT
AGTCAACGCCTTCACGTGGGGAACGGGCGAAGGCGGCCAGTTAGGATATG
GTGTGGACACTCCAATTTCGCAGGACGTCCCTCGGCCGGCATTCCCGATC
GGGGCGGTGCAGGGCCAGCACGTCGTCGATGCTGCCGCAGGAGGGAGGCA
CTCGCTGTTCCTCCTCGAATCCGGCGAGGTTTTGGCCTGCGGCGTGTGGG
ATGATGGGCAGCTTGGGTACAAGGACCGCCCCTTGGTGCTTTCCCCAGGA
TCTGCAGAGGAGATGGTGCCGGTACCCAAGTCTCTCGTGCCGCGAGGGAG
CGAGACGTTTCCCGTCCCAGTCCAGGTACCGGCAAAGCTGGTTGTGAAAG
AGCTTTCGGCGGGGTTTGCGTCTAGCTTTCTGGTGACAGACTTTGGCGAG
ATGAGGCGAAAAAAGAAGAAAAACAAGGAGCCCGAACAGGATGGGCGGGT
AGTCAACGCCTTCACGTGGGGAACGGGCGAAGGCGGCCAGTTAGGATATG
GTGTGGACACTCCAATTTCGCAGGACGTCCCTCGGCCGGCATTCCCGATC
GGGGCGGTGCAGGGCCAGCACGTCGTCGATGCTGCCGCAGGAGGGAGGCA
CTCGCTGTTCCTCCTCGAATCCGGCGAGGTTTTGGCCTGCGGCGTGTGGG
ATGATGGGCAGCTTGGGTACAAGGACCGCCCCTTGGTGCTTTCCCCAGGA
TCTGCAGAGGAGATGGTGCCGGTACCCAAGTCTCTCGTGCCGCGAGGGAG
CGAGACGTTTCCCGTCCCAGTCCAGGTACCGGCAAAGCTGGTTGTGAAAG
AGCTTTCGGCGGGGTTTGCGTCTAGCTTTCTGGTGACAGACTTTGGCGAG
GTTTGGTCATGGGGGAGTGGCAAGTTCGGTTGCCTTGGCTTGGGCGACGA
AGAGAGCCGATGGTTTCCCAGCCGCATCCCGCTATTCGCAGAAAGTCAGC
CAGCCACGGCAGAGACAATCAGCGCCGGCAAGTGGCACGTGCTGTGCCTT
ACCCACAAGACCCACGAAGTGTACGCATGGGGGCGCAACAACTGGGGGCA
GGCAAGCGAGTCGTTTCGGGTTTGGTCATGGGGGAGTGGCAAGTTCGGTT
GCCTTGGCTTGGGCGACGAAGAGAGCCGATGGTTTCCCAGCCGCATCCCG
CTATTCGCAGAAAGTCAGCCAGCCACGGCAGAGACAATCAGCGCCGGCAA
GTGGCACGTGCTGTGCCTTACCCACAAGACCCACGAAGTGTACGCATGGG
GGCGCAACAACTGGGGGCAGGCAAGCGAGTCGTTTCGGCTCGGAACAGGA
GAAACCGGTGCAAGCGAGCGGAGTCCCGTGACGGTACGATGGACCAAACA
GGAAACCCCGCTGCAGGTCTGCGCAGGAGCTGAGCACAGCATCGCCCTAG
TGGACCGGTTGCGGCCGAACCACCGACGAGACATCGTCGCCTACGCCTGG
GGAAGACCCGACCACGGACGATTGGGCTCTGAGCGTCAACAAACGCACGC
CTCGCCCATGGAGGTCGAGGACCTCACTCAAGCCCTCCGGAAGCTCAAGC
GGACAATTACGGGCCTCTCGGCCGGCGGGACTCATTCGCTGGCTGTGCTG
GGCTCCGGGGAGGTAGCTGCGTGGGGTGGGGGCGGCTACGGGCAACTGGG
GGACGGCCATATGTGGGACAGGCCAGAGTCGGTGATGGCGACCGGGTTGC
AGGGAGTACGGTCAGTCAGCGCCGGCGCAAGGCACTCGACGGCTCTCGCC
GTAGACCTTGCGGGCACGCAGGTGTGGGGCTGGGGCTTCAACCGGTGGGG
GGAGCTGGGTGGCGGGGGCGACAGCGTTCGGCTGCAGCCGAACAGGGTCG
GGGGGCTGGAAGGGTGCACGGTCCAGCAGATGGTGGCCGGGGAGAGGCAC
ACAATCGCCATCACGAACGGGAAGGCGCTCCGAGTGAAGGACTTGCGCGA
ATATCGAGGGTTTATCAACGCATACAAGAAGGGCGGGATCATGGTCTACG
ACGCCCTTAAGAAGACCATGGAGAAGCAGAAGCTCAATCCCGATTGGTTA
GACACCCCCCTCGAGTATTTTCCCGGGCAACCAGGCATGACCGAGGCCGA
GTGTCGGCTGGGCACCGCAGAGCCACACATGGACTGGTGCATGGACACGG
CGCCACCGGGCAAGGATGTATTCGACAGCCTCCGAGGAGGACATGAGATA
GTGTATGTCTGCCGTCCCTGCCACCGAGATCGCGTGTGCCTCGCCTGCGC
CAGAAAGTGCCATTCGAAGCACTGCATCGAGCCCGCCTTCCGTCTCAGAG
ACGGATCCAAGCCCTGCGACTGCAGCACCACCCCCGGCATGTGCGCCTGC
AAGTGGAGCCCCATGAGAGAACGCTGGCGAACGATCACCGCCGCAGGAGC
AACCCCGGGAAACCCGGCGTTGGGAGAGGACGGGTGTCTGCATCCCTCAG
AGCTGAGGGAGCTACTGCAGGTGGTTCGAGGAGGCGCGGCATTCGTTACC
TCGCTCGGAACAGGAGAAACCGGTGCAAGCGAGCGGAGTCCCGTGACGGT
ACGATGGACCAAACAGGAAACCCCGCTGCAGGTCTGCGCAGGAGCTGAGC
ACAGCATCGCCCTAGTGGACCGGTTGCGGCCGAACCACCGACGAGACATC
GTCGCCTACGCCTGGGGAAGACCCGACCACGGACGATTGGGCTCTGAGCG
TCAACAAACGCACGCCTCGCCCATGGAGGTCGAGGACCTCACTCAAGCCC
TCCGGAAGCTCAAGCGGACAATTACGGGCCTCTCGGCCGGCGGGACTCAT
TCGCTGGCTGTGCTGGGCTCCGGGGAGGTAGCTGCGTGGGGTGGGGGCGG
CTACGGGCAACTGGGGGACGGCCATATGTGGGACAGGCCAGAGTCGGTGA
TGGCGACCGGGTTGCAGGGAGTACGGTCAGTCAGCGCCGGCGCAAGGCAC
TCGACGGCTCTCGCCGTAGACCTTGCGGGCACGCAGGTGTGGGGCTGGGG
CTTCAACCGGTGGGGGGAGCTGGGTGGCGGGGGCGACAGCGTTCGGCTGC
AGCCGAACAGGGTCGGGGGGCTGGAAGGGTGCACGGTCCAGCAGATGGTG
GCCGGGGAGAGGCACACAATCGCCATCACGAACGGGAAGGCGCTCCGAGT
GAAGGACTTGCGCGAATATCGAGGGTTTATCAACGCATACAAGAAGGGCG
GGATCATGGTCTACGACGCCCTTAAGAAGACCATGGAGAAGCAGAAGCTC
AATCCCGATTGGTTAGACACCCCCCTCGAGTATTTTCCCGGGCAACCAGG
CATGACCGAGGCCGAGTGTCGGCTGGGCACCGCAGAGCCACACATGGACT
GGTGCATGGACACGGCGCCACCGGGCAAGGATGTATTCGACAGCCTCCGA
GGAGGACATGAGATAGTGTATGTCTGCCGTCCCTGCCACCGAGATCGCGT
GTGCCTCGCCTGCGCCAGAAAGTGCCATTCGAAGCACTGCATCGAGCCCG
CCTTCCGTCTCAGAGACGGATCCAAGCCCTGCGACTGCAGCACCACCCCC
GGCATGTGCGCCTGCAAGTGGAGCCCCATGAGAGAACGCTGGCGAACGAT
CACCGCCGCAGGAGCAACCCCGGGAAACCCGGCGTTGGGAGAGGACGGGT
GTCTGCATCCCTCAGAGCTGAGGGAGCTACTGCAGGTGGTTCGAGGAGGC
GCGGCATTCGTTACCTCGGATGACGTGGATGACGGGCTGGCACAGCTCAC
CCATGGCGGAGAGAAGGAACGGATAGACTATCTGCCGTTCGAGCGCTGGT
ATGAAGAGCACTTTAGCAAGATCGACGCTGAGCTGGATGACGGAGTGGCG
AGCTCACAAGCCGCAGCAAAGTAAGATGACGTGGATGACGGGCTGGCACA
GCTCACCCATGGCGGAGAGAAGGAACGGATAGACTATCTGCCGTTCGAGC
GCTGGTATGAAGAGCACTTTAGCAAGATCGACGCTGAGCTGGATGACGGA
GTGGCGAGCTCACAAGCCGCAGCAAAGTAA
back to top