mRNA_L-elsbetiae_contig21501.6582.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 221 bits (562), Expect = 2.100e-64 Identity = 115/238 (48.32%), Postives = 152/238 (63.87%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSV-----------CISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+ E+ LY +++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + + KRRRSN KN+SVE+RLPKI RF ++ R Q V +ST P +L+ QVPLPF NGL++TW G++RV +SQP AGL+KRQCTMQ+ FGPG+ R +IFRG G RIS VEKAA+HK VDV FQ AWAD +C WA +YR+G+ Sbjct: 244 FPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGL 481
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE) HSP 1 Score: 219 bits (559), Expect = 6.400e-64 Identity = 115/238 (48.32%), Postives = 151/238 (63.45%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSV-----------CISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+ E+ LY ++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + + KRRRSN KN+SVE+RLPKI RF ++ R Q V +ST P +L+ QVPLPF NGL++TW G++RV +SQP AGL+KRQCTMQ+ FGPG+ R +IFRG G RIS VEKAA+HK VDV FQ AWAD +C WA +YR+G+ Sbjct: 176 FPEEEKKLYNTFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGL 413
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 221 bits (562), Expect = 4.750e-63 Identity = 115/238 (48.32%), Postives = 152/238 (63.87%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSV-----------CISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+ E+ LY +++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + + KRRRSN KN+SVE+RLPKI RF ++ R Q V +ST P +L+ QVPLPF NGL++TW G++RV +SQP AGL+KRQCTMQ+ FGPG+ R +IFRG G RIS VEKAA+HK VDV FQ AWAD +C WA +YR+G+ Sbjct: 358 FPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGL 595
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5KZ92_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ92_9PHAE) HSP 1 Score: 211 bits (538), Expect = 1.090e-61 Identity = 112/238 (47.06%), Postives = 149/238 (62.61%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSV-----------CISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+ E+ L +++A+RR+ LKV TLWL + V++++P+D R F S+RWA KWA + + KRRRSN KN+SVE+RLPKI RF ++ R Q V +ST P +L+ QVPLPF NGL++TW G++RV +SQP AGL+KRQCTMQ+ FGPG+ R +I RG G RIS VEKAA+HK VDV FQ AWAD +C WA +YR+G+ Sbjct: 204 FPEEEKKLCNIFLARRRRKLKVPTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRILVILRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGL 441
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE) HSP 1 Score: 205 bits (521), Expect = 2.050e-57 Identity = 109/238 (45.80%), Postives = 149/238 (62.61%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSV-----------CISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+ E+ LY +++A+RR+ LKVSTLWL + V++++P+D R F S+RWA KWA + + KR RSN K++SV++RLPKI RF ++ R Q V +ST P +L+ QVPLPF NGL++TW G++RV +SQP AGL+KR+CTMQ+ FGPG+ R +IFRG G RIS VEKAA+HK VDV FQ A A +C WA +YR+G+ Sbjct: 645 FPEEEKKLYNMFLARRRRKLKVSTLWLTVTFRKLVQENHPEDQRAAAFSASFRWARKWAKRHKLSKRCRSNLKSKSVKERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRKCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENALAHQKFCMEWAKRSYREGL 882
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5KH13_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH13_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.840e-52 Identity = 99/205 (48.29%), Postives = 127/205 (61.95%), Query Frame = 1 Query: 100 EVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSV-----------CISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 E ++++P+D R F S+RWA KWA + + KRRRSN KN+SVE+RLPKI RF ++ R Q V +ST P +L+ QVPLPF NGL++TW G++RV VSQP AGL KR+CTMQ+ FGPG+ R +IFRG G RIS VEKAA+HK VDV FQ AWAD +C WA +YR+G+ Sbjct: 47 EDRQNHPEDQRAAAFSASFRWARKWAKRHKLSKRRRSNLKNKSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAVSQPFAGLGKRKCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGL 251
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 191 bits (485), Expect = 2.720e-52 Identity = 106/241 (43.98%), Postives = 140/241 (58.09%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACT------------------QNSVCISTAHTKNITPPLVPHDRLFFLQVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+AEQALY +Y +R+K ++VST WL + + + YP+DPR F+ S+RWA KWA++ S+ RR+SN KN+S E+RLPKI +LK+ R Q + AH K +P +RL QVP F NG V +W G+ RV + QP GL+KRQCT+Q FGPG + + IIFRG GT IS VEKAA+ K VDV FQ AWAD N+C W +R + Sbjct: 1412 FPEAEQALYTMYRERRKKKVRVSTRWLTVTFRKLLAEKYPEDPRAKTFRASYRWAQKWAHRHSLSMRRKSNGKNKSSEERLPKINAWLKRYRELLREPRRCGGELVPWPQQVPQEASGDLQAHHK--WGRFLPDERLNTDQVPTGFVNGQVDSWEQTGARRVHIMQPFPGLEKRQCTVQPTFGPGGKVMKCAIIFRGKGTGISKVEKAAYDKRVDVFFQPKAWADDNFCMQWLERCFRPSL 1650
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5KWT7_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT7_9PHAE) HSP 1 Score: 184 bits (468), Expect = 2.550e-50 Identity = 101/223 (45.29%), Postives = 138/223 (61.88%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSVCISTAHTKNITPPLVPHDRLFFLQVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 FP+AE+ LY +++ +R + LKVSTLWL T+M ++++ KWA + ++ KRRR+N KN+SVE+RLPKI RF + LR Q V +++ +R + VPL F NGL+ TW ++G+ RV +SQP GL KRQCTMQ+ FGP + R + FRGTG RIS VEKAA+HK VDV FQ AWAD +C WA S+YR+G+ Sbjct: 421 FPEAEKRLYKMFVERRMRKLKVSTLWL-TIMFRKLE------------------GTKWAKRHNLSKRRRTNLKNKSVEERLPKIQRFHRLLRKLLQEPVRYRAPDQSDVSAITTVAERESRVPVPLAFVNGLLDTWEERGAKRVAISQPFPGLVKRQCTMQVIFGPSEKTSRISVNFRGTGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKSSYREGL 624
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5JHV4_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV4_9PHAE) HSP 1 Score: 182 bits (463), Expect = 3.820e-50 Identity = 103/216 (47.69%), Postives = 135/216 (62.50%), Query Frame = 1 Query: 1 FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSVC--------ISTAHTKNITPPLVPHDRLFFL-------QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQ 603 FP+AE+ LY + +R++ LKVSTLWL + V++ YP D R F+ S+RWA KWA + ++ KRRR+N KN+SVE+RLPKI RF + R Q V +ST T VP F L QV L F NGL+ TW +G++RV +S P AGL+KRQCTMQ+ FGPG+ R +IFRGTG RIS VEKAA+H+ VDVS++ Sbjct: 151 FPEAEKRLYKGIVEQRKRKLKVSTLWLTITFRKLVREMYPGDQRAASFRASFRWARKWAKRHNLSKRRRTNLKNKSVEERLPKIHRFHRLFRKLLQEPVRYRAPDESDVSTVTTVAERESRVPRYGQFQLWERWNVDQVSLAFVNGLLETWDKRGALRVAISHPFAGLEKRQCTMQVIFGPGEKTIRISVIFRGTGKRISPVEKAAYHEDVDVSYR 366
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Match: A0A6H5L6F1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F1_9PHAE) HSP 1 Score: 179 bits (454), Expect = 3.580e-49 Identity = 94/209 (44.98%), Postives = 124/209 (59.33%), Query Frame = 1 Query: 55 GLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPSWRWAGKWANKRSIVKRRRSNSKNESVEQRLPKIGRFLKKLRACTQNSVCISTAHTKNITPPLVPHDRLFFL----QVPLPFANGLVTTWADKGSMRVRVSQPSAGLDKRQCTMQLCFGPGDVLFRPGIIFRGTGTRISAVEKAAWHKGVDVSFQACAWADSNYCASWAASTYRDGV 669 LKVST WL + V++ YP D R F+ S+RWA +WA + ++ KRRR+N KN+ VE RLP + I+T + P +L+ QVPL F NGL+ TW ++G+ RV +SQP +GL+KR CTMQ+ FGPG+ R +IFRGTG RIS VEKAA+HK VDV FQ AW D +C WA +YR G+ Sbjct: 295 SLKVSTPWLTITFRKLVREMYPGDQRAAAFRASFRWAREWAKRHNLSKRRRTNLKNKFVEDRLPNVS--------------AITTVAERESNVPKYGQFQLWERWNVDQVPLAFVNGLLVTWEERGAKRVAISQPFSGLEKRPCTMQVIFGPGETTLRISVIFRGTGKRISPVEKAAYHKDVDVFFQENAWGDQKFCMEWAKRSYRQGL 489 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21501.6582.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21501.6582.1 >prot_L-elsbetiae_contig21501.6582.1 ID=prot_L-elsbetiae_contig21501.6582.1|Name=mRNA_L-elsbetiae_contig21501.6582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=223bp FPKAEQALYGLYMAKRRKGLKVSTLWLCTMMAQEVKKHYPDDPRRLIFKPback to top mRNA from alignment at L-elsbetiae_contig21501:969..2230- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21501.6582.1 ID=mRNA_L-elsbetiae_contig21501.6582.1|Name=mRNA_L-elsbetiae_contig21501.6582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1262bp|location=Sequence derived from alignment at L-elsbetiae_contig21501:969..2230- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21501:969..2230- >mRNA_L-elsbetiae_contig21501.6582.1 ID=mRNA_L-elsbetiae_contig21501.6582.1|Name=mRNA_L-elsbetiae_contig21501.6582.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1338bp|location=Sequence derived from alignment at L-elsbetiae_contig21501:969..2230- (Laminarionema elsbetiae ELsaHSoW15)back to top |