mRNA_L-elsbetiae_contig2150.6579.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2150.6579.1
Unique NamemRNA_L-elsbetiae_contig2150.6579.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: D8LAU6_ECTSI (rRNA-processing protein EFG1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU6_ECTSI)

HSP 1 Score: 299 bits (765), Expect = 4.330e-88
Identity = 231/356 (64.89%), Postives = 253/356 (71.07%), Query Frame = 2 
Query:   86 MPHTNRARRADHYRSIETSNTSSXXXXXXXXXXXXXXXXXX------HDDGALNHKLDGQNGDSERYGGRGAGXXXXXXXXXXXXXXXXXXXXGGXXAEQTRAAAPXXXXXGGKG-----------------KSKTPSVKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFLKEALARGEAAGWAEFQDNLDRFVTSSXXXXXXXQGGRLTAPPASDSGSAAGQDANGRGGLKKRKVGLDALLPVVAQEKLWDEGEEDGS 1084
            MPHTNRARRADHYRSI+ + +S XXXXXXXXXXXXXXXXXX       D GAL++  D     SERYGGR  G XXXXXXXXXXX XXX      XX         XXXXX                     K K PS KNRIRSLTRLMNKPGIEEEQR HL+RQV+ELEGK SER+K ERER LAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAR ELE+KR +EE DLKYVLYFPKDKKYL L KGKEGPPRAQRSH RFLKEAL RGEAAGW EFQ+NLD+FVT         +GGR   P  +   +AA ++     G  KR  G+ AL PVVAQ+KLWD+GE++ S
Sbjct:    1 MPHTNRARRADHYRSIDGAGSSGXXXXXXXXXXXXXXXXXXXXSHQEQDGGALDYNHDTNVKASERYGGRSPGAXXXXXXXXXXXRXXXGARSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKNPSAKNRIRSLTRLMNKPGIEEEQRLHLQRQVEELEGKVSEREKQERERTLAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAARAELERKRDTEEADLKYVLYFPKDKKYLPLGKGKEGPPRAQRSHVRFLKEALVRGEAAGWTEFQENLDKFVTGGG------EGGR---PKVAVDAAAAAEE-----GDVKRNKGIGAL-PVVAQQKLWDDGEDNSS 341
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: A0A7S1CB15_9STRA (rRNA-processing protein EFG1 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB15_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.180e-15
Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 2 
Query:  401 GGKGKSKTPSVKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFLKEALARGEAAGWAEFQDNLDRFVTSSXXXXXXXQGGRLTAPPASDSGSAAGQDANGRGG 997
            GG    KTPS+KNR+RS+ RL+N P +  + R   +R +  LE K +E  + ERER +A +YHK KFF+R+K +RR+A+    L       ARE    + +  E DL+Y+ ++P+ +KY+ L   +    +A     R ++EA      AG  EF  +      ++       +  +     A   G+AAG      GG
Sbjct:    2 GGSKPHKTPSLKNRMRSVRRLLNNPKLTGQARKDKERLLRRLEAKLAEGAQGERERKIARRYHKVKFFERKKVVRRIARAQAALAAADSAEAREAASTELKRHEADLEYITWYPRHEKYVALFPKQRDDAKAAAKRAR-MREAAHANAVAG--EFLGSATAVTPATATKASQLRAHKARRIVAERKGAAAGXXXXXAGG 197
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: Q015G9_OSTTA (rRNA-processing protein EFG1 n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q015G9_OSTTA)

HSP 1 Score: 80.1 bits (196), Expect = 9.750e-13
Identity = 54/148 (36.49%), Postives = 90/148 (60.81%), Query Frame = 2 
Query:  416 SKTPSVKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIE-EAAREELEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERF--LKEALARGEAA 850
            ++ PSVKN+IRS+TRL+ +P + ++ R   +R++++LE +  +  + ERE+ L+ +YHK KFF+R K  RR+AQ+ R+ +G    + A  EL + R+    DL+YV +FP+ +KY+ +         A +  ER   L +A    EAA
Sbjct:   21 ARRPSVKNQIRSITRLLARPNVPQKLREEKQRELEKLERQGRDNKRVEREKKLSTRYHKVKFFERVKLTRRIAQLEREKEGGAGGDDAEAELSRLRE----DLEYVTHFPRGEKYVSVLVSDGDTEHATKERERLRRLVKANLAAEAA 164
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: A0A7S2RJF1_9STRA (rRNA-processing protein EFG1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJF1_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.850e-12
Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 2 
Query:  413 KSKTPSVKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFL------KEALARGEA 847
            K KTPS KN+IRSL RL++K  ++ E R  ++ ++ EL  +  ++ + + ER  A +YHK KFF+RRK +RRL  + ++L    + +    L+ +    + D+ YV YFP DKKY+ L         A+R  ERF       K A+ RGEA
Sbjct:    9 KKKTPSRKNQIRSLRRLLSKEDLDAELRKSIESKLGELGEQVVDKQQEDLERKRAQRYHKVKFFERRKLMRRLEAVKKQLSKAADTSEVTTLKDELVRLDEDMTYVRYFPNDKKYISLFATDVDEATARR-RERFRDLARQNKAAVLRGEA 158
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: A0A7R9UYT8_DIALT (rRNA-processing protein EFG1 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UYT8_DIALT)

HSP 1 Score: 76.3 bits (186), Expect = 3.850e-12
Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = 2 
Query:  407 KGKSKTPSV---KNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFLKEALARGEAAG 853
            +G+ K PSV   K ++RS+ R +N+P +  E +A  +  + +L     +  +   E   A KYHK KFF+RRK  RR+ Q  RKL    + A R ELE++  +   DL+Y+ YFP + KYL L   + G     +  +R L+E +A+  A G
Sbjct:    8 RGQEKRPSVTHVKKQMRSVQRTLNRPELPAEAKAKHEAALAKLNDDLRKAKRSRLESHRATKYHKVKFFERRKCERRIGQTERKLAAASDPAERAELERQLDAHRLDLQYIRYFPPEHKYLSLYPTEGGENDFVQKRKRKLRELVAKRIAEG 159
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: R7SXP4_DICSQ (rRNA-processing protein EFG1 n=1 Tax=Dichomitus squalens (strain LYAD-421) TaxID=732165 RepID=R7SXP4_DICSQ)

HSP 1 Score: 76.3 bits (186), Expect = 2.240e-11
Identity = 50/147 (34.01%), Postives = 82/147 (55.78%), Query Frame = 2 
Query:  431 VKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSE--------ETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFLKEALARGEA 847
            +K  +R   RL+ K  +  + R   +R++  LE   ++ ++   ER+LA +YHK KFF+R+K LR++AQ+ R+LKGD E+   E L +K + +          DL YVL++PK KKY+ L      PP  ++  E   +    +G+A
Sbjct:   47 IKAALRQTRRLLAKDSLAADVRVKTERRLKSLEADLAKAERARVERSLAARYHKVKFFERQKLLRKIAQVKRQLKGDGEDGEGETLGKKERKKLEKRLGELRVDLNYVLHYPKTKKYISLF-----PPEVRKGEEAEAETVDEKGKA 188
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: EFG1P_COPC7 (rRNA-processing protein EFG1 n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=EFG1P_COPC7)

HSP 1 Score: 75.5 bits (184), Expect = 2.680e-11
Identity = 41/112 (36.61%), Postives = 73/112 (65.18%), Query Frame = 2 
Query:  431 VKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQL 766
            +K+ +R + RL+ K  +  ++R   +R++  LE +  + ++  +ERALAI+YHK KFF+R+K  R+L Q+ R+L    + + +E+LE +   E  +L Y+L++PK KKY+ L
Sbjct:   43 IKSSLRQVRRLLAKENLAADKRVEAERRLKALEAELQQVEQAHKERALAIRYHKVKFFERQKVTRKLNQVKRRL-DSADGSEKEQLEAQLLEERVNLNYILHYPKTKKYISL 153
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: A0A4Q9PE18_9APHY (rRNA-processing protein EFG1 n=3 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9PE18_9APHY)

HSP 1 Score: 75.1 bits (183), Expect = 1.190e-10
Identity = 50/147 (34.01%), Postives = 81/147 (55.10%), Query Frame = 2 
Query:  431 VKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSE--------ETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFLKEALARGEA 847
            +K  +R   RL+ K  +    R   +R++  LE   ++ ++   ER+LA +YHK KFF+R+K LR++AQ+ R+LKGD E+   E L +K + +          DL YVL++PK KKY+ L      PP  ++  E   +    +G+A
Sbjct:  123 IKAALRQTRRLLAKDSLAANVRVKTERRLKSLEADLAKAEQARVERSLAARYHKVKFFERQKLLRKIAQVKRQLKGDGEDGEGETLGKKERKKLEKRLGELRVDLNYVLHYPKTKKYISLF-----PPEVRKGEEAEAETVDEKGKA 264
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BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: A0A8H5FZW0_9AGAR (rRNA-processing protein EFG1 n=1 Tax=Leucoagaricus leucothites TaxID=201217 RepID=A0A8H5FZW0_9AGAR)

HSP 1 Score: 73.6 bits (179), Expect = 1.250e-10
Identity = 50/152 (32.89%), Postives = 85/152 (55.92%), Query Frame = 2 
Query:  416 SKTPSV---KNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQL--AKGKEGPPRAQRSHERFLKEALARGEAAGW 856
            S TP V   K+ +R   RL+ K  +  + R   +R++  LE + ++ +   +ER +A +YHK KFF+R+K  R++AQ  ++L  +  E++R++L +       DL Y+L++PK KKY+ L   + ++   R+  S E   K A AR E   W
Sbjct:   40 SATPGVSKIKSSLRQTRRLLAKDKLAADVRVETERRLKALETELAQAELANKERTIAARYHKVKFFERQKVTRKIAQTKKQLSSESSESSRKKLTKALNDLRVDLNYILHYPKLKKYISLFPPEVRQDGARSAPSSEDAAKTAHAREEVRSW 191
[Close]
BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Match: A0A8H3CYQ9_9AGAM (rRNA-processing protein EFG1 n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3CYQ9_9AGAM)

HSP 1 Score: 73.6 bits (179), Expect = 1.270e-10
Identity = 46/143 (32.17%), Postives = 83/143 (58.04%), Query Frame = 2 
Query:  431 VKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGKASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKG-DIEEAAREELEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEG----PPRAQRSHERFLKEALARGE 844
            VK+ IR   RL+ K  +  + R   +R++  LE   ++ +  ++ER +A++YHK KFFD+RK  R++ Q+ R L+G ++++  R++L+++  S   DL Y+L +PK  KY+ L    E       + +      ++EA+ RGE
Sbjct:   39 VKSAIRQTRRLLAKDNLAADIRIQSERRLKSLETDLAKAEIRKKERTMAVRYHKIKFFDKRKVTRKIGQVKRALEGSELDKKERKKLQKELLSHRVDLNYILNYPKLDKYIALYPSSESNDDQTDKLREERRLLVREAMERGE 181
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2150.6579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAU6_ECTSI4.330e-8864.89rRNA-processing protein EFG1 n=1 Tax=Ectocarpus si... [more]
A0A7S1CB15_9STRA9.180e-1532.16rRNA-processing protein EFG1 (Fragment) n=1 Tax=Bi... [more]
Q015G9_OSTTA9.750e-1336.49rRNA-processing protein EFG1 n=2 Tax=Ostreococcus ... [more]
A0A7S2RJF1_9STRA2.850e-1237.75rRNA-processing protein EFG1 n=1 Tax=Rhizochromuli... [more]
A0A7R9UYT8_DIALT3.850e-1235.53rRNA-processing protein EFG1 n=1 Tax=Diacronema lu... [more]
R7SXP4_DICSQ2.240e-1134.01rRNA-processing protein EFG1 n=1 Tax=Dichomitus sq... [more]
EFG1P_COPC72.680e-1136.61rRNA-processing protein EFG1 n=1 Tax=Coprinopsis c... [more]
A0A4Q9PE18_9APHY1.190e-1034.01rRNA-processing protein EFG1 n=3 Tax=Dichomitus sq... [more]
A0A8H5FZW0_9AGAR1.250e-1032.89rRNA-processing protein EFG1 n=1 Tax=Leucoagaricus... [more]
A0A8H3CYQ9_9AGAM1.270e-1032.17rRNA-processing protein EFG1 n=1 Tax=Rhizoctonia s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2150contigL-elsbetiae_contig2150:2899..8179 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.7
Seed ortholog evalue3.1e-78
Seed eggNOG ortholog2880.D8LAU6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.rRNA processing
EggNOG OGsKOG4484@1,KOG4484@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionrRNA-processing protein EFG1
Ec32 orthologEc-27_006340.1
Exons6
Model size2371
Cds size1812
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2150.6579.1prot_L-elsbetiae_contig2150.6579.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2150 2984..7705 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815878.2930195-UTR-L-elsbetiae_contig2150:2898..29831622815878.2930195-UTR-L-elsbetiae_contig2150:2898..2983Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2150 2899..2983 +
1691683163.3014188-UTR-L-elsbetiae_contig2150:2898..29831691683163.3014188-UTR-L-elsbetiae_contig2150:2898..2983Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2150 2899..2983 +
1622815878.3831186-UTR-L-elsbetiae_contig2150:7705..81791622815878.3831186-UTR-L-elsbetiae_contig2150:7705..8179Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2150 7706..8179 +
1691683163.378911-UTR-L-elsbetiae_contig2150:7705..81791691683163.378911-UTR-L-elsbetiae_contig2150:7705..8179Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig2150 7706..8179 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815878.3071425-CDS-L-elsbetiae_contig2150:2983..33731622815878.3071425-CDS-L-elsbetiae_contig2150:2983..3373Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 2984..3373 +
1691683163.312152-CDS-L-elsbetiae_contig2150:2983..33731691683163.312152-CDS-L-elsbetiae_contig2150:2983..3373Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 2984..3373 +
1622815878.319234-CDS-L-elsbetiae_contig2150:3960..40671622815878.319234-CDS-L-elsbetiae_contig2150:3960..4067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 3961..4067 +
1691683163.3215904-CDS-L-elsbetiae_contig2150:3960..40671691683163.3215904-CDS-L-elsbetiae_contig2150:3960..4067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 3961..4067 +
1622815878.3310885-CDS-L-elsbetiae_contig2150:4689..47651622815878.3310885-CDS-L-elsbetiae_contig2150:4689..4765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 4690..4765 +
1691683163.3317308-CDS-L-elsbetiae_contig2150:4689..47651691683163.3317308-CDS-L-elsbetiae_contig2150:4689..4765Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 4690..4765 +
1622815878.3467913-CDS-L-elsbetiae_contig2150:5507..55731622815878.3467913-CDS-L-elsbetiae_contig2150:5507..5573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 5508..5573 +
1691683163.3450513-CDS-L-elsbetiae_contig2150:5507..55731691683163.3450513-CDS-L-elsbetiae_contig2150:5507..5573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 5508..5573 +
1622815878.3579717-CDS-L-elsbetiae_contig2150:6147..70331622815878.3579717-CDS-L-elsbetiae_contig2150:6147..7033Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 6148..7033 +
1691683163.353057-CDS-L-elsbetiae_contig2150:6147..70331691683163.353057-CDS-L-elsbetiae_contig2150:6147..7033Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 6148..7033 +
1622815878.3706498-CDS-L-elsbetiae_contig2150:7418..77051622815878.3706498-CDS-L-elsbetiae_contig2150:7418..7705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 7419..7705 +
1691683163.363906-CDS-L-elsbetiae_contig2150:7418..77051691683163.363906-CDS-L-elsbetiae_contig2150:7418..7705Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2150 7419..7705 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2150.6579.1

>prot_L-elsbetiae_contig2150.6579.1 ID=prot_L-elsbetiae_contig2150.6579.1|Name=mRNA_L-elsbetiae_contig2150.6579.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=604bp
MPHTNRARRADHYRSIETSNTSSATSNGGGNQGGRRRSHHEHDDGALNHK
LDGQNGDSERYGGRGAGRGPGGRGAGRGRQGGTYGRGGGRGAEQTRAAAP
AAAPAGGKGKSKTPSVKNRIRSLTRLMNKPGIEEEQRAHLKRQVDELEGK
ASERDKHERERALAIKYHKAKFFDRRKALRRLAQIHRKLKGDIEEAAREE
LEQKRQSEETDLKYVLYFPKDKKYLQLAKGKEGPPRAQRSHERFLKEALA
RGEAAGWAEFQDNLDRFVTSSSSSSSSGQGGRLTAPPASDSGSAAGQDAN
GRGGLKKRKVGLDALLPVVAQEKLWDEGEEDGSGGDADPGDAGGEEASDL
GDGDDDDDGGGDEDDEDDDEASTESTPAPRRKKERKTAPSALSEPPPAES
GSGMSEAENSDSEHELSGDEGFGAAASDEDEAYSFAEARMRWAGGGGGGG
GGPAATGGRAAGGDSDGGSNDGHDSDESVGDIYAGVLARSTAAGSGGGAD
TVRDEGSSTATAAAAEVAGEEAGGGDTARKEEAGKGDAGGLLSAPALTGG
GGQDEVPALHLRGGAVGEGAPDGVGCRTGVVAGARGEGLPAPVEGPGDEV
VDE*
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mRNA from alignment at L-elsbetiae_contig2150:2899..8179+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2150.6579.1 ID=mRNA_L-elsbetiae_contig2150.6579.1|Name=mRNA_L-elsbetiae_contig2150.6579.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5281bp|location=Sequence derived from alignment at L-elsbetiae_contig2150:2899..8179+ (Laminarionema elsbetiae ELsaHSoW15)
GTTGTACTACGTGTACGCGTGAGCTGTGGTGTGGTTTCCTTTGCTTTGAA
CCTAATCCGAAGTAGCACAGCCTTCTTTCTACGGCATGCCGCACACGAAC
CGCGCAAGGCGCGCGGACCATTACCGCTCCATCGAAACCAGCAACACTTC
CTCTGCGACCAGCAACGGCGGCGGCAACCAAGGCGGCCGACGGCGCTCTC
ACCACGAGCACGACGATGGTGCCCTCAACCACAAGCTTGACGGTCAAAAC
GGTGACTCCGAGCGCTACGGTGGGCGTGGCGCTGGGCGCGGCCCCGGGGG
GCGCGGAGCTGGGCGTGGTAGACAAGGCGGAACCTACGGAAGGGGTGGTG
GACGGGGAGCGGAGCAGACACGGGCGGCGGCACCAGCGGCGGCCCCAGCG
GGAGGCAAGGGGAAGAGCAAGACGCCGTCCGTGAAGAACCGCATCAGGAG
CTTGACACGGCTTATGAACAAACCGGTACGAGCTTGTGTGCGACTTTATG
CCGATCCCTGATCGCGATGCTGCTATTTACTACTACGCTACATACACTGC
TTCGTACATAGAAACATAAGATAGATCCACCTCATGAACCGGTTTGCAGC
CTGTCATGTGTGCAATATATTGCCCGGTGACTAGCATACTTACAAAGTCA
TAGGGGCGAGTCTTTATACTTGACTTGCTTTCTCCCCATTCAAACCTGGC
TACGGCAACTCTCCTCTTGTATGTATGCGATGTTGCGCCCCAGCCACAGC
AGTAGCAGCAGTGCAGGGAAGTCTCGTCGCGGGGTGTGCCACGACGATAC
CACACGATATATTGACGATCGCGTTCCACGCACAGGTATACAGCAAGTGG
TTTTGGGAGCGTTGGGCGAGCGCACACCCACGAGGGAACGTGCTGCGCCA
GCGTCGAAACATCGCCGTTTAGTCTTGCCTACCATCAGGTCATATAGATA
TCTGGGGGTACATCCATGCCTACGCAGACGTACGTACGAATGGACCTCTT
TCCCACCGAGTGCTCACAGCTAGTGCCGCTCCTCCATCTGGTTGTTCCGT
CCTGCGTGCCAGGGCATCGAAGAGGAACAACGGGCGCACTTGAAGCGCCA
GGTGGATGAGCTGGAGGGGAAGGCGTCGGAGCGGGACAAGCACGAACGGG
AACGAGCCCTTGCCATCAAGTGAGAAAGAGGAAGAGAAGCGTTACCGTAC
ACGAGTACGACACAAGACAAGGGCGGCGTTGGAAAGACATTATCAAGAGC
TGCCCGAAAACGGGTCGTTTGGTATTGGACTCATCATGCTCGTTGCGGAG
TAACCTAGCTTTGAAAATCGGTCCAGGGGGTGTGTTATCTCGTGTCGTAT
ACGGTACGTTCTTTAGTTGAAGCTCCTTGAAGCATCTCGTCATCAATGCT
CATGGAGTGGAAAGTTGTGTCGTGTTTCCCTTTGATTAAAACTCATGGAA
GTGGCCAGACGCGTGTGCGCTCGATGCATGCACGTGCGCATGTTTACATC
GGTGGGCGGACCTTGTTCCTGGGGTAAAGTAAGGTGCTTGCACTTGGCGG
GGGCGTGGTGTCGGATGTGGATTTATAATACTTCGAAGTACATGAGTTGA
GTGTTTAGCGGGCTCTGAAGCGGGCTATTCTGTCTCGTTGCTTGCACTCT
GACAGCAGCTTGAAACAACGTTGCCAGTCCAACAGTCAGTTGCAGACAAT
CTACCGTGCTGGTACTTGTTTTGGCACTTCGCAGAGCTAAGCCTATTCAT
ATCCCTCCGCCCCCCCCCCCACGGCCCTCTCTGGTGTGCAGATACCACAA
GGCAAAGTTCTTTGACCGCAGAAAGGCTTTGCGTCGACTGGCACAAATTC
ACCGGAAGCTGAAAGGGGTGAGTTTCTAGCGGGGATTTGGAATACCACTG
GCTGTAACGAGGGGTACCGTAGTCTCTCTCGTGGGACAGAGGCGTCCCAA
TATTTCCTCGAGAACGACCAGCAACCTTCAGTTTCAGAGGTGTCTTTCCG
AAATGCGAGAGCCGTCAGCGTCAGTTCGAGGCGCGATGATCTGCGACGGC
GGGTTCAAAAAGGGCCATGCATGCCTTGTGGAGACTGCTGCTCATCTGCA
CATCGTCGATTGTTGAGCTTTACTTCGCAATCCCGCGCACACAGGAAATG
CTGGAGCGTGGCGTTTGTGCCGTTGTACAAAGCAGAGGGGTGCATGTGGT
GGCGCGGAGGGGGGGGGGGGATCGTGTTCTGAGCTAAAACAAATACTTCG
AAGTATATAGGAATTTTGTTTTGTACTTTCGTTTTTTTTTTTGGTCGGTG
GAACCTTGAGCCGACGGGGCAACAAACGCCTTGAGATTCAGTTGCAACCG
CCGTGCTCTTGTCCCAACCGTGCACGCCCCACTGGCGTATGCCTCACTCC
CCCGACACAAGTTGTACATACATACGAGGTACGTACTTCCGATCCGATGT
GGCTGTCAGCTTCGTCTCGCTCGCAGGCAGGTAGCGACGACTAACTTAAC
AATGACCCGTGCCAGGCTTCTATAATTTACATTATTTTCTGTTTCGTTTC
CTTGCCGCCCCTAAACCTAAATGGCGCGCACGATGTGGTGTTTTTTTTTT
TTTTTGCAGGACATCGAGGAGGCGGCGCGTGAGGAGCTAGAGCAAAAACG
TCAGAGCGAAGAAACAGACCTCAAGGTATGTATGTGCTACAAAAATCATA
GATAGCCCCATGCTTCTATAGGCAGACAATCAATGCCAGTGGACGCAAGG
GGCGCACCGTGTGACACACGGAGCGGTTGTTAGTTGTTGAGGGTGGGCCG
CGTGCGCCAGTCTTTCATGTGTGTTGAATGAATCACGAGTGCTGCTCATT
GTGCTTGCGGGACGGGCCTGGCCCGAAGCATGGCGGCAGCGGTGCAGCGG
CGAGTTCCATTGCGCCCGATGTTGGATTTCCCTGTTTTTATTCACATCAG
ACTAAATATAGCTCAGAGCAAAGCTGCTCAAAAAGGCGCTTGATTCATAT
CCAACGGATAAAAGTTTTGCTTCGCTCGGGCGAGCGAGCACACCGGCCGG
CACGGGCGGCTGTGAATTCGCTCACGGGGACATTTGTGCGACGCACGGGC
AGTGAAATTCAGCGGGGGTATTGCGATCGGGCGCGGCGCCAAGCGTGCGC
CTGCGAGCGGGCCCCAGACCGCTGTAGGTTCACCATGCCCGTACTTTCTC
ATGTACGTCCCCATTCGCCTCCCCGTTACTCTGTGCCCCTTCTCGGCAGT
ACGTGCTCTACTTCCCCAAGGACAAGAAGTACCTCCAGCTGGCGAAGGGG
AAGGAGGGCCCCCCCCGCGCTCAGCGCTCCCACGAGCGCTTCCTGAAGGA
GGCTCTGGCGCGCGGGGAGGCCGCCGGATGGGCAGAGTTCCAGGACAACC
TGGATAGGTTTGTCACCAGCAGCAGCAGCAGCAGCAGCAGCGGGCAGGGT
GGTCGGCTCACGGCGCCGCCCGCCTCGGACTCGGGGTCCGCCGCCGGGCA
GGATGCGAACGGGCGCGGCGGTCTGAAGAAGCGAAAGGTGGGGCTCGACG
CGCTGCTCCCGGTGGTGGCCCAGGAGAAGCTTTGGGACGAAGGAGAGGAG
GATGGGAGTGGCGGGGACGCGGACCCAGGAGATGCAGGAGGAGAAGAGGC
ATCGGATTTGGGGGATGGCGATGATGATGATGATGGTGGTGGTGATGAGG
ATGATGAAGATGATGATGAAGCCAGCACTGAATCCACGCCGGCGCCCCGA
AGGAAGAAGGAGAGGAAGACGGCCCCGAGCGCGTTGTCCGAGCCTCCTCC
TGCGGAATCAGGATCCGGGATGTCGGAGGCCGAAAACTCCGATTCAGAGC
ACGAACTCAGCGGGGACGAGGGCTTCGGAGCCGCGGCCAGCGACGAGGAC
GAAGCGTACAGCTTTGCGGAGGCGAGGATGAGGTGGGCGGGCGGCGGGGG
TGGTGGAGGCGGCGGCCCCGCAGCAACCGGTGGGCGGGCTGCAGGCGGCG
ACAGCGACGGCGGTAGTAACGACGGCCACGACAGCGATGAGAGCGTCGGG
GACATTTACGCCGGTGTTCTCGCGAGGTCTACGGCCGCAGGCAGCGGCGG
TGGCGCGGACACGGTGCGGGACGAGGGAAGCAGCAGTGACGAGGATAGCG
GCAGCGACAGCGGCGGGGAAGGCGACAGCGGCAGCGACGAAAGAGAAAAG
GCGGAGCTCGCCGGGAGAACCCGAGCCGAAGCGCAGCCGACGGTACTGCC
ATCCTCGGGATCAGACAGTGGCGACGACATCGACAGCGGCAGCGACGAAA
GAGAAAAGGCGGAGCTCGCCGGGAGAACCCGAGCCGAAGCGCGGCCGACG
GTACTGCCATCCTCGGGATCAGACAGTGGCGACGACATCGACCTCAACGA
CGATTTTTTCATGGAAGAAAAAGGGAGCGACGCTGAAGACCAAGCACGCT
CCCGCACCGAAGGCACCGCAACAGCCGGCAAGAACGCACGCGCCAGGCGC
GACGAGAGGAGAAATAACAGCGGCGACCGCGGCAGCGGCAGAGGTCGCGG
GGGAAGAGGCGGGCGGGGGCGACACGGCCAGGAAAGAGGAGGCGGGGAAG
GGAGACGCGGGGGGTCTTCTTTCGGCTCCAGCTCTAACGGGGGGAGGGGG
GCAGGACGAGGTTCCGGCACTGCATTTGAGGGGAGGGGCAGTGGGCGAGG
GGGCACCGGACGGGGTTGGGTGCCGCACGGGCGTGGTGGCGGGGGCCCGC
GGGGAGGGTTTGCCGGCACCGGTGGAAGGGCCGGGCGACGAGGTGGTGGA
CGAGTAGGAGGCCGAGGTAGAGGCGCCGTCGGGGGTCACAGTCACGGCGA
TGTTCGTCCGAACAAGATTACTCGCTTCGGCGATGATTAATTAATTGTGT
GTATCGTACCGTCATCGCGGCTTTGCTTTGTCTTTACGGATCGGCTGGCG
TCCCTAAAGCTGCAGCTATCCCTGCTGCCTTAGAATGTCGAGCGTGGCGA
CGAACCGCCGTGGTTCTCTAAAGAGAGAGATGTTGGGTGTTGGGGTATGA
GCGGCAGTACCAGTATATAAGGTTGAGAGTGCGAATGGCAGTGGGGTCCA
GCACCTGAAAGGTGCCCGCCGAAGAACGACCACGTCTACTGACTATCCCT
GCAGCAGTTGTTTGTAGAGGGAGCAAGCCCTTGGGCAGTCATCGGACTTC
GGAGACCGACCGTCTGTTCATCTGTGAATTTATTTTCATTTTCCTGAGTT
TTGGAACAACACAAACCGCCAACAACGCGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig2150:2899..8179+

>mRNA_L-elsbetiae_contig2150.6579.1 ID=mRNA_L-elsbetiae_contig2150.6579.1|Name=mRNA_L-elsbetiae_contig2150.6579.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3624bp|location=Sequence derived from alignment at L-elsbetiae_contig2150:2899..8179+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGCACACGAACCGCGCAAGGCGCGCGGACCATTACCGCTCCATCGA
AACCAGCAACACTTCCTCTGCGACCAGCAACGGCGGCGGCAACCAAGGCG
GCCGACGGCGCTCTCACCACGAGCACGACGATGGTGCCCTCAACCACAAG
CTTGACGGTCAAAACGGTGACTCCGAGCGCTACGGTGGGCGTGGCGCTGG
GCGCGGCCCCGGGGGGCGCGGAGCTGGGCGTGGTAGACAAGGCGGAACCT
ACGGAAGGGGTGGTGGACGGGGAGCGGAGCAGACACGGGCGGCGGCACCA
GCGGCGGCCCCAGCGGGAGGCAAGGGGAAGAGCAAGACGCCGTCCGTGAA
GAACCGCATCAGGAGCTTGACACGGCTTATGAACAAACCGATGCCGCACA
CGAACCGCGCAAGGCGCGCGGACCATTACCGCTCCATCGAAACCAGCAAC
ACTTCCTCTGCGACCAGCAACGGCGGCGGCAACCAAGGCGGCCGACGGCG
CTCTCACCACGAGCACGACGATGGTGCCCTCAACCACAAGCTTGACGGTC
AAAACGGTGACTCCGAGCGCTACGGTGGGCGTGGCGCTGGGCGCGGCCCC
GGGGGGCGCGGAGCTGGGCGTGGTAGACAAGGCGGAACCTACGGAAGGGG
TGGTGGACGGGGAGCGGAGCAGACACGGGCGGCGGCACCAGCGGCGGCCC
CAGCGGGAGGCAAGGGGAAGAGCAAGACGCCGTCCGTGAAGAACCGCATC
AGGAGCTTGACACGGCTTATGAACAAACCGGGCATCGAAGAGGAACAACG
GGCGCACTTGAAGCGCCAGGTGGATGAGCTGGAGGGGAAGGCGTCGGAGC
GGGACAAGCACGAACGGGAACGAGCCCTTGCCATCAAGGCATCGAAGAGG
AACAACGGGCGCACTTGAAGCGCCAGGTGGATGAGCTGGAGGGGAAGGCG
TCGGAGCGGGACAAGCACGAACGGGAACGAGCCCTTGCCATCAAATACCA
CAAGGCAAAGTTCTTTGACCGCAGAAAGGCTTTGCGTCGACTGGCACAAA
TTCACCGGAAGCTGAAAGGGATACCACAAGGCAAAGTTCTTTGACCGCAG
AAAGGCTTTGCGTCGACTGGCACAAATTCACCGGAAGCTGAAAGGGGACA
TCGAGGAGGCGGCGCGTGAGGAGCTAGAGCAAAAACGTCAGAGCGAAGAA
ACAGACCTCAAGGACATCGAGGAGGCGGCGCGTGAGGAGCTAGAGCAAAA
ACGTCAGAGCGAAGAAACAGACCTCAAGTACGTGCTCTACTTCCCCAAGG
ACAAGAAGTACCTCCAGCTGGCGAAGGGGAAGGAGGGCCCCCCCCGCGCT
CAGCGCTCCCACGAGCGCTTCCTGAAGGAGGCTCTGGCGCGCGGGGAGGC
CGCCGGATGGGCAGAGTTCCAGGACAACCTGGATAGGTTTGTCACCAGCA
GCAGCAGCAGCAGCAGCAGCGGGCAGGGTGGTCGGCTCACGGCGCCGCCC
GCCTCGGACTCGGGGTCCGCCGCCGGGCAGGATGCGAACGGGCGCGGCGG
TCTGAAGAAGCGAAAGGTGGGGCTCGACGCGCTGCTCCCGGTGGTGGCCC
AGGAGAAGCTTTGGGACGAAGGAGAGGAGGATGGGAGTGGCGGGGACGCG
GACCCAGGAGATGCAGGAGGAGAAGAGGCATCGGATTTGGGGGATGGCGA
TGATGATGATGATGGTGGTGGTGATGAGGATGATGAAGATGATGATGAAG
CCAGCACTGAATCCACGCCGGCGCCCCGAAGGAAGAAGGAGAGGAAGACG
GCCCCGAGCGCGTTGTCCGAGCCTCCTCCTGCGGAATCAGGATCCGGGAT
GTCGGAGGCCGAAAACTCCGATTCAGAGCACGAACTCAGCGGGGACGAGG
GCTTCGGAGCCGCGGCCAGCGACGAGGACGAAGCGTACAGCTTTGCGGAG
GCGAGGATGAGGTGGGCGGGCGGCGGGGGTGGTGGAGGCGGCGGCCCCGC
AGCAACCGGTGGGCGGGCTGCAGGCGGCGACAGCGACGGCGGTAGTAACG
ACGGCCACGACAGCGATGAGAGCGTCGGGGACATTTACGCCGGTGTTCTC
GCGAGGTCTACGGCCGCAGGCAGCGGCGGTGGCGCGGACACGGTGCGGGA
CGAGGGAAGCAGCATACGTGCTCTACTTCCCCAAGGACAAGAAGTACCTC
CAGCTGGCGAAGGGGAAGGAGGGCCCCCCCCGCGCTCAGCGCTCCCACGA
GCGCTTCCTGAAGGAGGCTCTGGCGCGCGGGGAGGCCGCCGGATGGGCAG
AGTTCCAGGACAACCTGGATAGGTTTGTCACCAGCAGCAGCAGCAGCAGC
AGCAGCGGGCAGGGTGGTCGGCTCACGGCGCCGCCCGCCTCGGACTCGGG
GTCCGCCGCCGGGCAGGATGCGAACGGGCGCGGCGGTCTGAAGAAGCGAA
AGGTGGGGCTCGACGCGCTGCTCCCGGTGGTGGCCCAGGAGAAGCTTTGG
GACGAAGGAGAGGAGGATGGGAGTGGCGGGGACGCGGACCCAGGAGATGC
AGGAGGAGAAGAGGCATCGGATTTGGGGGATGGCGATGATGATGATGATG
GTGGTGGTGATGAGGATGATGAAGATGATGATGAAGCCAGCACTGAATCC
ACGCCGGCGCCCCGAAGGAAGAAGGAGAGGAAGACGGCCCCGAGCGCGTT
GTCCGAGCCTCCTCCTGCGGAATCAGGATCCGGGATGTCGGAGGCCGAAA
ACTCCGATTCAGAGCACGAACTCAGCGGGGACGAGGGCTTCGGAGCCGCG
GCCAGCGACGAGGACGAAGCGTACAGCTTTGCGGAGGCGAGGATGAGGTG
GGCGGGCGGCGGGGGTGGTGGAGGCGGCGGCCCCGCAGCAACCGGTGGGC
GGGCTGCAGGCGGCGACAGCGACGGCGGTAGTAACGACGGCCACGACAGC
GATGAGAGCGTCGGGGACATTTACGCCGGTGTTCTCGCGAGGTCTACGGC
CGCAGGCAGCGGCGGTGGCGCGGACACGGTGCGGGACGAGGGAAGCAGCA
CGGCGACCGCGGCAGCGGCAGAGGTCGCGGGGGAAGAGGCGGGCGGGGGC
GACACGGCCAGGAAAGAGGAGGCGGGGAAGGGAGACGCGGGGGGTCTTCT
TTCGGCTCCAGCTCTAACGGGGGGAGGGGGGCAGGACGAGGTTCCGGCAC
TGCATTTGAGGGGAGGGGCAGTGGGCGAGGGGGCACCGGACGGGGTTGGG
TGCCGCACGGGCGTGGTGGCGGGGGCCCGCGGGGAGGGTTTGCCGGCACC
GGTGGAAGGGCCGGGCGACGAGGTGGTGGACGAGTAGCGGCGACCGCGGC
AGCGGCAGAGGTCGCGGGGGAAGAGGCGGGCGGGGGCGACACGGCCAGGA
AAGAGGAGGCGGGGAAGGGAGACGCGGGGGGTCTTCTTTCGGCTCCAGCT
CTAACGGGGGGAGGGGGGCAGGACGAGGTTCCGGCACTGCATTTGAGGGG
AGGGGCAGTGGGCGAGGGGGCACCGGACGGGGTTGGGTGCCGCACGGGCG
TGGTGGCGGGGGCCCGCGGGGAGGGTTTGCCGGCACCGGTGGAAGGGCCG
GGCGACGAGGTGGTGGACGAGTAG
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