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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1007 |
| Cds size | 897 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815876.8434193-UTR-L-elsbetiae_contig2147:2096..2201 | 1622815876.8434193-UTR-L-elsbetiae_contig2147:2096..2201 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2147 2097..2201 + |
| 1691683162.2890687-UTR-L-elsbetiae_contig2147:2096..2201 | 1691683162.2890687-UTR-L-elsbetiae_contig2147:2096..2201 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2147 2097..2201 + |
| 1622815876.8543773-UTR-L-elsbetiae_contig2147:2773..2778 | 1622815876.8543773-UTR-L-elsbetiae_contig2147:2773..2778 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2147 2774..2778 + |
| 1691683162.2986424-UTR-L-elsbetiae_contig2147:2773..2778 | 1691683162.2986424-UTR-L-elsbetiae_contig2147:2773..2778 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig2147 2774..2778 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815876.8644893-CDS-L-elsbetiae_contig2147:2778..2878 | 1622815876.8644893-CDS-L-elsbetiae_contig2147:2778..2878 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2147 2779..2878 + |
| 1691683162.3081703-CDS-L-elsbetiae_contig2147:2778..2878 | 1691683162.3081703-CDS-L-elsbetiae_contig2147:2778..2878 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2147 2779..2878 + |
| 1622815876.8770242-CDS-L-elsbetiae_contig2147:2998..3795 | 1622815876.8770242-CDS-L-elsbetiae_contig2147:2998..3795 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2147 2999..3795 + |
| 1691683162.3183584-CDS-L-elsbetiae_contig2147:2998..3795 | 1691683162.3183584-CDS-L-elsbetiae_contig2147:2998..3795 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig2147 2999..3795 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig2147.6562.1 >prot_L-elsbetiae_contig2147.6562.1 ID=prot_L-elsbetiae_contig2147.6562.1|Name=mRNA_L-elsbetiae_contig2147.6562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp
MSQAELGVGGMAKERSIDYGGSGSSSGGGDNGDGTALCTAFRTTLLQGMV
KSTMQLHLASLGLYATCRESPGVSVTVCIVKETPEVLWKTRTRQPAGRLP
RISVSCIRFGSYFNQPIVGMEWPQKLQQIEFGGKFNQPIVGVVWPQKLQK
IRFRDDFNQPIVGVVWPPALQQIEFGRFFNQPIDSVVWPSALQKIAFDGA
FNHPHELVDLPSALQQIDLGWYFNQPIVGVKWPPALQPIDFGWDFNQPIV
GVEWPAALQQIRFGDDFIQPIVGVKWPPALKKIDFGWDFNQPIVGVVWP back to topmRNA from alignment at L-elsbetiae_contig2147:2097..3795+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig2147.6562.1 ID=mRNA_L-elsbetiae_contig2147.6562.1|Name=mRNA_L-elsbetiae_contig2147.6562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1699bp|location=Sequence derived from alignment at L-elsbetiae_contig2147:2097..3795+ (Laminarionema elsbetiae ELsaHSoW15)
ATCTGGTAGCGCACACAGCCTGTCTTCCCACGGCGTAATCCCAACCAACC
AACAAGACCGGTGAAGGCACCCGCACGCAGCAGCCACCAGCAGCCTCAAG
AGCAGGTACGTTGCGAGTTCGTGCACAGGTCTCCTGTCGTGCGTCGTTTA
TTTTGTTTAGGTGACTGCCGCGCCGGTGGCTCATGCAAGTTTGAATTTGC
CCACCTCGTTTGTCGGAGCCGCGTGATGCCATGGCGTACCGACGGCGTCA
AATGCCTTAGATATGGCGGGTACAACAATGTGTACGACGGGGGCAACTTC
TGTGAGCTTAAACAAAAGCTCTGTGGTTCGCATGTCTGACACACGTTCAT
GGTACACACTGAAGATAACACCCCCCCCAAATTGGAGGAGACCATAGATT
TCGCAAGTCATTGATTATATCGCAGCTAGCTCTAGCTACTGCTGTAAAAG
TACCAGCATGTACGTGCCTCTCATACACACGTTGATTATATCGCAGCTAG
CTACTGTTGTAAAAGTATGTACATGTGCGTGCACAATTCTCTTTTTTTGC
AACCTGTAGGCTCACTCACTGCTTGCACTGATGCATGCGACGTTAATCGT
ATAATCCCTCGCCGAAATCCCCACCGCTCGTTTTTTAACACAACTCCCTC
TTCCCCCGACCAACCGTGACGAAACAGCGAAGATGTCTCAGGCTGAACTC
GGTGTGGGAGGGATGGCCAAGGAACGGTCAATTGATTACGGTGGCTCTGG
CTCCAGCTCTGGTGGTGGAGACAATGGCGACGGTGAGGTTTGGTTATCAT
ACCTGCGTTTGTTGCGTGTTTTGTGTGAGTTGTAACGCGTGCGTACGTCA
TTTTGAAATTTCAACTGACCAATTGATCGCTCTGTTTTTTTTGTTTTTTC
AGGTACAGCCCTCTGCACAGCCTTCCGCACCACGCTGCTGCAGGGGATGG
TTAAGTCTACGATGCAGCTGCACCTGGCGTCTCTGGGCTTGTACGCCACG
TGCCGCGAGTCTCCAGGGGTTTCTGTTACTGTGTGTATCGTCAAGGAAAC
ACCCGAAGTGTTGTGGAAAACCCGGACTAGACAGCCAGCGGGACGACTGC
CTCGCATCAGCGTCTCTTGTATCAGGTTCGGTTCGTATTTCAACCAGCCC
ATCGTCGGCATGGAGTGGCCACAGAAGCTGCAGCAGATCGAGTTCGGTGG
TAAATTCAACCAGCCCATCGTCGGCGTGGTGTGGCCACAGAAGCTGCAGA
AGATCCGGTTCAGAGATGATTTCAACCAGCCCATCGTCGGCGTGGTGTGG
CCACCGGCGCTGCAGCAGATCGAGTTCGGTCGCTTTTTCAACCAGCCCAT
CGACAGCGTGGTGTGGCCGTCGGCGCTGCAGAAGATCGCGTTTGATGGGG
CTTTCAACCACCCCCATGAACTTGTCGATCTGCCATCGGCGCTGCAGCAG
ATCGACCTCGGTTGGTATTTCAACCAGCCCATCGTCGGCGTGAAGTGGCC
ACCGGCGCTGCAGCCGATCGACTTCGGTTGGGATTTCAACCAGCCCATCG
TCGGCGTGGAGTGGCCAGCGGCGCTGCAGCAGATCCGGTTCGGTGATGAT
TTCATCCAGCCCATCGTCGGCGTGAAGTGGCCACCGGCGCTGAAGAAGAT
CGACTTCGGTTGGGATTTCAACCAGCCCATCGTCGGCGTGGTGTGGCCA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig2147:2097..3795+ >mRNA_L-elsbetiae_contig2147.6562.1 ID=mRNA_L-elsbetiae_contig2147.6562.1|Name=mRNA_L-elsbetiae_contig2147.6562.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1794bp|location=Sequence derived from alignment at L-elsbetiae_contig2147:2097..3795+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTCAGGCTGAACTCGGTGTGGGAGGGATGGCCAAGGAACGGTCAAT
TGATTACGGTGGCTCTGGCTCCAGCTCTGGTGGTGGAGACAATGGCGACG
ATGTCTCAGGCTGAACTCGGTGTGGGAGGGATGGCCAAGGAACGGTCAAT
TGATTACGGTGGCTCTGGCTCCAGCTCTGGTGGTGGAGACAATGGCGACG
GTACAGCCCTCTGCACAGCCTTCCGCACCACGCTGCTGCAGGGGATGGTT
AAGTCTACGATGCAGCTGCACCTGGCGTCTCTGGGCTTGTACGCCACGTG
CCGCGAGTCTCCAGGGGTTTCTGTTACTGTGTGTATCGTCAAGGAAACAC
CCGAAGTGTTGTGGAAAACCCGGACTAGACAGCCAGCGGGACGACTGCCT
CGCATCAGCGTCTCTTGTATCAGGTTCGGTTCGTATTTCAACCAGCCCAT
CGTCGGCATGGAGTGGCCACAGAAGCTGCAGCAGATCGAGTTCGGTGGTA
AATTCAACCAGCCCATCGTCGGCGTGGTGTGGCCACAGAAGCTGCAGAAG
ATCCGGTTCAGAGATGATTTCAACCAGCCCATCGTCGGCGTGGTGTGGCC
ACCGGCGCTGCAGCAGATCGAGTTCGGTCGCTTTTTCAACCAGCCCATCG
ACAGCGTGGTGTGGCCGTCGGCGCTGCAGAAGATCGCGTTTGATGGGGCT
TTCAACCACCCCCATGAACTTGTCGATCTGCCATCGGCGCTGCAGCAGAT
CGACCTCGGTTGGTATTTCAACCAGCCCATCGTCGGCGTGAAGTGGCCAC
CGGCGCTGCAGCCGATCGACTTCGGTTGGGATTTCAACCAGCCCATCGTC
GGCGTGGAGTGGCCAGCGGCGCTGCAGCAGATCCGGTTCGGTGATGATTT
CATCCAGCCCATCGTCGGCGTGAAGTGGCCACCGGCGCTGAAGAAGATCG
ACTTCGGTTGGGATTTCAACCAGCCCATCGTCGGCGTGGTGTGGCCAGTA
CAGCCCTCTGCACAGCCTTCCGCACCACGCTGCTGCAGGGGATGGTTAAG
TCTACGATGCAGCTGCACCTGGCGTCTCTGGGCTTGTACGCCACGTGCCG
CGAGTCTCCAGGGGTTTCTGTTACTGTGTGTATCGTCAAGGAAACACCCG
AAGTGTTGTGGAAAACCCGGACTAGACAGCCAGCGGGACGACTGCCTCGC
ATCAGCGTCTCTTGTATCAGGTTCGGTTCGTATTTCAACCAGCCCATCGT
CGGCATGGAGTGGCCACAGAAGCTGCAGCAGATCGAGTTCGGTGGTAAAT
TCAACCAGCCCATCGTCGGCGTGGTGTGGCCACAGAAGCTGCAGAAGATC
CGGTTCAGAGATGATTTCAACCAGCCCATCGTCGGCGTGGTGTGGCCACC
GGCGCTGCAGCAGATCGAGTTCGGTCGCTTTTTCAACCAGCCCATCGACA
GCGTGGTGTGGCCGTCGGCGCTGCAGAAGATCGCGTTTGATGGGGCTTTC
AACCACCCCCATGAACTTGTCGATCTGCCATCGGCGCTGCAGCAGATCGA
CCTCGGTTGGTATTTCAACCAGCCCATCGTCGGCGTGAAGTGGCCACCGG
CGCTGCAGCCGATCGACTTCGGTTGGGATTTCAACCAGCCCATCGTCGGC
GTGGAGTGGCCAGCGGCGCTGCAGCAGATCCGGTTCGGTGATGATTTCAT
CCAGCCCATCGTCGGCGTGAAGTGGCCACCGGCGCTGAAGAAGATCGACT
TCGGTTGGGATTTCAACCAGCCCATCGTCGGCGTGGTGTGGCCA back to top
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