mRNA_L-elsbetiae_contig2145.6558.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig2145.6558.1
Unique NamemRNA_L-elsbetiae_contig2145.6558.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: D8LDH2_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH2_ECTSI)

HSP 1 Score: 738 bits (1904), Expect = 1.630e-263
Identity = 349/457 (76.37%), Postives = 396/457 (86.65%), Query Frame = 1
Query:    1 MVRMKLGLYHSPHNVADGDVIYRDVSIEGPKGIIRTSPPSDDDVINEGTCPIDSTTGQCQRFDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKESGNVEGMDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSAN--DDEDVFRHGSATCEFPCSGDDEETCGGYWALSLYEYGSELPIDTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHEWCMDFCSEFKAKYYGLQFGRE 1365
            MVRMKLGLYHS HNV D +VIY+D+SIEGP GIIRTSP  DD      TC +DS+ GQCQ+ D  C  LSGNTIDWECVFG GSLVE EARGG L SC +GTKVEPCSRFIVP+++ERAEVL QQGVGGFQF KGETY+F YSF+AK+ MKVSGSS+R+GQMKGVS GFQL GNPLFS+TANN+GINVRFNN ES  VEGMDE+LSWED+ GEWV+VEIQTTFGKSMEV FSGAV+GKAVWPSSYKPVAWNNDAD++M KLGLYHI+NKVADAEVEYKN+SI+GP G IRTS LGV + G PEGVMY+GCV+D   DR+L++++RSSD+T EMCA YCEG+DFFG+QYG ECWCGS +  DDED+FRHGS TCE+PC+GD+E+TCGGYWA+SLYEYGS L  D P GSRYLGCY DHRFERALSLKLTTS DMTHEWCMDFCSEF AKY+ +Q+GRE
Sbjct:   89 MVRMKLGLYHSIHNVHDQEVIYQDISIEGPNGIIRTSPHVDDPT---NTCSVDSS-GQCQQTDITCTALSGNTIDWECVFGYGSLVEVEARGGTLTSCSAGTKVEPCSRFIVPEDKERAEVLVQQGVGGFQFAKGETYIFKYSFKAKDGMKVSGSSSRLGQMKGVSGGFQLLGNPLFSVTANNDGINVRFNNDESDIVEGMDEFLSWEDATGEWVNVEIQTTFGKSMEVHFSGAVEGKAVWPSSYKPVAWNNDADTMMFKLGLYHIRNKVADAEVEYKNISIQGPAGTIRTSALGVKNHGSPEGVMYLGCVKDSRDDRLLDSVYRSSDLTTEMCATYCEGDDFFGMQYGSECWCGSTDEKDDEDLFRHGSTTCEYPCAGDEEQTCGGYWAISLYEYGSALATDIPEGSRYLGCYSDHRFERALSLKLTTSNDMTHEWCMDFCSEFNAKYFAVQWGRE 541          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: D8LDH3_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH3_ECTSI)

HSP 1 Score: 611 bits (1575), Expect = 1.510e-215
Identity = 295/424 (69.58%), Postives = 344/424 (81.13%), Query Frame = 1
Query:   43 VADGDVIYRDVSIEGPKGIIRTSPPSDDDVINEGTCPIDS--TTGQCQRFDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKESGNVEGMDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSA--NDDEDVFRHGSATCEFPCSGDDEETCGGYWALSLYEYGSELPIDTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHE 1302
            V D +VIY+D+SIEGP GIIRTSP SD         PID+  T G C +    C   SG+TIDW C+FG GSLVE +ARGG LVSC SGT  EPCSRFIVPKEQERAEVLAQ+GVGGFQF KGE Y+F YSFRAK+ MKVSGSSTRIGQMKGVS GFQLKGNPLFS+TANNNGINVRFNN+ES  VEGMD+ LSWED+ GEWVHVEI+TTFGKSMEV FSGAV+GKAVWPSSYKPVAWN+DAD++M KLGLYHIKNKVAD EVEYKN+SI+GP G++RTS++G  D G P+G+M +GCV+D   DR+L+N++R  D+T E C++YCE E FFG+QYG ECWCG+    D ED+FRHGSATC   CSGD ++TCGG WA+SLY++GS  P D P G+RYLGC+KD+RF RALS K T+S DMT E
Sbjct:    7 VHDQEVIYQDISIEGPNGIIRTSPTSDP--------PIDTCLTLGSCPKSGTTCPPSSGSTIDWNCMFGAGSLVEVQARGGTLVSCSSGTDAEPCSRFIVPKEQERAEVLAQKGVGGFQFAKGEAYIFKYSFRAKDGMKVSGSSTRIGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEESDKVEGMDDTLSWEDATGEWVHVEIRTTFGKSMEVYFSGAVEGKAVWPSSYKPVAWNDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDSDHGPPQGIMSLGCVKDADHDRLLDNIYRFEDLTPEKCSKYCESEPFFGMQYGSECWCGTGAGEDVEDMFRHGSATCNMACSGDKDKTCGGSWAMSLYQHGSASPGDIPEGTRYLGCFKDNRFNRALSSKQTSSNDMTLE 422          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: A0A6H5JXY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY2_9PHAE)

HSP 1 Score: 578 bits (1489), Expect = 1.660e-199
Identity = 295/483 (61.08%), Postives = 345/483 (71.43%), Query Frame = 1
Query:    1 MVRMKLGLYHSPHNVADGDVIYRDVSIEGPKGIIRTSPPSDDDVINEGTCPIDSTTGQCQRFDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKG-----------------------------------------------ETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKESGNVEGMDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSA--NDDEDVFRHGSATCEFPCSGDDEETCGGYWALSLYEYGSELPIDTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHE 1302
            MVRMKLGLYHS HNV D +VIY+D+SIEGP GIIRTSPPSD   I+  +C   ST G C      C   SG+TIDW C+FGVGSL E EARGGKLVSCPSGT  EPCSRFIVPKE+ERAEVLAQ+GVGGFQF KG                                               ETY+F YSFRAK+ MKVSGSSTR+GQMKGVS GFQLKGNPLFS+TANNNGINVRFNN++  NVEGMDE+LSWED+ GEWVHVEIQTTFGKSMEV FSGAV GKAVWPSSYKPVAW++DAD++M KLGLYHIKNKVAD EVEYKN+SI+GP G++RTS++G  + G P+G+  +GC +D   DR+L+N++R  D+T                    ECWCG+    D ED+FRHGSATC   CSGD ++TCGG WA+SLY++GS  P+D P G+RYLGC+KD+RF RALS K T+S D+T E
Sbjct:  167 MVRMKLGLYHSIHNVHDQEVIYQDISIEGPNGIIRTSPPSD---IHIHSC---STFGSCSVSGTTCPPSSGSTIDWNCMFGVGSLAEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAEVLAQKGVGGFQFAKGRNGWPSVMGLVPKNVPSSRGRVVNGLTAKACITKRVRPPGFLPHPKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEDDDNVEGMDEFLSWEDATGEWVHVEIQTTFGKSMEVYFSGAVKGKAVWPSSYKPVAWSDDADTIMFKLGLYHIKNKVADGEVEYKNISIQGPNGLLRTSSVGDINHGPPQGITSLGCAKDARHDRLLDNIYRFEDLT-------------------PECWCGTGAGEDVEDMFRHGSATCNMACSGDKDKTCGGPWAMSLYQHGSASPVDIPEGTRYLGCFKDNRFNRALSKKQTSSNDLTLE 624          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: A0A6H5KQZ0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ0_9PHAE)

HSP 1 Score: 579 bits (1493), Expect = 4.920e-198
Identity = 301/486 (61.93%), Postives = 347/486 (71.40%), Query Frame = 1
Query:    1 MVRMKLGLYHSPHNVADGDVIYRDVSIEGPKGIIRTSPPSDDDVINEGTCPIDSTTGQCQ--RFDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKG---------------------------ETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKESGNVEGMDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSAN--DDEDVFRHGSATCEFPCSGDDEETCGGYWALSLYEYGSELPIDTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHEWCMDFCSEFKAKYYGLQFGRE 1365
            MVRMKLGLYHS HNVAD +VIY+D+SIEGP GIIRTSP  DD      TCPIDS+         D  C  LSGNTIDWECVFG GSLVE EARGG L SC +GTKVEPCSRFIVP+++ERAEVL QQGVGGFQF KG                           ETY+F YSF+ K+ MKVSGSS+R+GQMKGVS GFQL GNPLFS+TANN+GINVRFNN ES  VEGMDE+LSWED+ GEWV+VEIQTTFGKSMEV+         + PS  + + +                  KVADAEVEYKN+SI+GPTG IRTS LGV + G PEGVM++GCV+D   DR+L++++RSS++T                    ECWCGS +  DDED+FRHGSATCE+PC+GD+E+TCGGYWA+SLYEYGS L  D P GSRYLGCY DHRFERALSLKLTTS DMTHEWCMDFCSEF AKY+ +Q+GRE
Sbjct:  343 MVRMKLGLYHSIHNVADQEVIYQDISIEGPNGIIRTSPHVDDPT---NTCPIDSSDIWLNPTMVDITCAALSGNTIDWECVFGYGSLVEVEARGGTLTSCSAGTKVEPCSRFIVPEDKERAEVLVQQGVGGFQFAKGKPRFSMVPCPKKRGIHPTSQFLPHSQGETYIFKYSFKPKDGMKVSGSSSRLGQMKGVSGGFQLIGNPLFSITANNDGINVRFNNDESDIVEGMDEFLSWEDATGEWVNVEIQTTFGKSMEVL-----GDLYIHPSVTQSLPF------------------KVADAEVEYKNISIQGPTGTIRTSALGVKNHGSPEGVMHLGCVKDSRNDRLLDSVYRSSNLT-------------------TECWCGSTDEKDDEDLFRHGSATCEYPCAGDEEQTCGGYWAISLYEYGSALATDIPEGSRYLGCYSDHRFERALSLKLTTSNDMTHEWCMDFCSEFNAKYFAVQWGRE 783          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: A0A6H5JBB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB3_9PHAE)

HSP 1 Score: 511 bits (1315), Expect = 2.980e-172
Identity = 277/474 (58.44%), Postives = 321/474 (67.72%), Query Frame = 1
Query:    1 MVRMKLGLYHSPHNVADGDVIYRDVSIEGPKGIIRTSPPSDDDVINEGTCPIDSTTGQCQRFDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKESGNVEGMDEYLSWEDSAGEWVHVEIQTTFGKSME-VIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKV-------------------------------------ADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSANDD--EDVFRHGSATCEFPCSGDDEETCGGYWALSLYEYGSELPIDTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHE 1302
            MVRMKLGLYHS HNV D +VIYRD+SIEGP GIIRTSPPSD   I+   C    T G C R    C   SG+TIDW C+FGVGSLVE EARGGKLVSCPSGT  EPCSRFIVPKE+ERAE  AQ+GVGGFQF KGETY+F YSFRAK+ MKVSGSSTR+GQMKGVS GFQLKGNPLFS+TANNNGINVRFNN++  NVEGMDE+LSWED+ GEWVHVEIQTTFG+    V FSGAV+GKAVWP SYKPVAWN+DAD++M KLGLYHIKNKV                                     AD EVEYKN+SI+GP G++RTS++G  +   P+G+  +GCV+D   DR+L+N++R  D+T                    ECWCG+   +  E +FRHGSATC   CSGD ++TCGG                      YLG +KD+RF RALS K T+S DMT E
Sbjct:  275 MVRMKLGLYHSIHNVHDQEVIYRDISIEGPNGIIRTSPPSD---IHIHPC---RTFGSCPRSVTTCPPSSGSTIDWNCMFGVGSLVEVEARGGKLVSCPSGTDAEPCSRFIVPKEKERAE--AQKGVGGFQFAKGETYIFKYSFRAKDGMKVSGSSTRLGQMKGVSGGFQLKGNPLFSVTANNNGINVRFNNEDDDNVEGMDEFLSWEDATGEWVHVEIQTTFGEVHGGVYFSGAVNGKAVWPPSYKPVAWNDDADTIMFKLGLYHIKNKVGRLEIPVRALETNSASSSLDGRSSPSTTNRSIPPPKVADGEVEYKNISIQGPNGLLRTSSVGDINHRPPQGITSLGCVKDARHDRLLDNIYRFEDLT-------------------PECWCGTGAGEVVEGMFRHGSATCNMACSGDKDKTCGG---------------------PYLGWFKDNRFNRALSKKQTSSNDMTLE 700          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: A0A6H5KAW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW5_9PHAE)

HSP 1 Score: 401 bits (1030), Expect = 1.090e-132
Identity = 206/443 (46.50%), Postives = 285/443 (64.33%), Query Frame = 1
Query:  184 FDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKG-----NPLFSLTANNNGINVRFNNKESGNV--EGMDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNL-FRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSANDDEDVFRHG-SATCEFPCSGDDE-ETCGGYWALSLYEYGSELPIDTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHEWCMDFCSEFKAKYYGLQFGRECFCGSADEDYDQYGTATCDMPCAGDPSLICGGALALSTF 1482
             D  C     N IDW+CVFG GSL E   +GG +  C SG +  PCS F+V K++ER+E    +G  GF + KGE Y+  YSFRA+E M+VS   T +GQ+KG     ++KG     +P++ LTAN +G+ VRF+N+E  +   EG+ ++L+W+DS G+WVHV+I TTFG+ M V  SGAV+G+AVWPS+ KPVAW+ DAD V +KLGLYH  ++V D +VEY+++SIEGP G+IRTS    PD    EG +YVGC  D   D V +   +  + MT EMCA+ C+G  +FG Q G ECWC ++ D     +HG S +C   C G    +TCGG  +LS++++  E P D P GS+Y+GC+ D  + RAL+LK T S  M ++ C  FC    A+Y+GLQ G +CFCG  ++DYD++G A C   CAGD   +CG +LA + F
Sbjct:   19 IDITCDAEKDNHIDWDCVFGPGSLDEVNKKGGYMTKC-SGKRHYPCSLFVVKKDEERSETKVNEGPEGFDYYKGEKYIIKYSFRAEEGMRVSSKYTHLGQLKGTIGKGKVKGTMIKLDPIYCLTANKDGLMVRFSNREMPDNFHEGLSKHLNWKDSTGQWVHVKIVTTFGEFMVVRLSGAVEGRAVWPSNLKPVAWHRDADRVRMKLGLYHKIDQVYDGKVEYRDISIEGPNGIIRTSPE--PDH---EGHLYVGCFADDDDDHVFSGKKYVDAHMTNEMCADLCDGTRYFGTQDGTECWCSASKDRPR--KHGKSKSCNKACPGTSRIKTCGGRSSLSVFKFEGE-PEDVPRGSKYMGCFADDIYNRALTLKETKSSKMDYDMCESFCDAANARYFGLQSGTKCFCGKREDDYDEHGPALCSTECAGDSKSVCGDSLAQTVF 452          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: D8LDJ9_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDJ9_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 3.030e-81
Identity = 153/386 (39.64%), Postives = 208/386 (53.89%), Query Frame = 1
Query:  130 VINEGTC---PIDSTTGQCQRFDKVCGVLSGNTIDWECVFGVGSLVE-----AEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQ-LKGNPLFSLTANNNGINVRFNN--KESGNVEGMDE-YLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPE----GVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYG---------------------LECWCGSANDDEDVFRHGSATCEFPCSGDDEETCGGYWALSLY 1176
            VI++  C    + S   +  + D  C     N IDW+C+FG  S  E     ++ +  +        K  PCSRFIVPK  +RAE     G  GF F KGE Y++ YSFRA E MK+    T IGQ+KG  +G Q + G+P+ S++AN +G++VRF+N  K   +    D  Y +W+D+ GEWVHV I T FG+SMEV F+G V GK VWP    PVAWNN      +KLGLYH + +V D EVE ++VSIEGP G+IRTS    P     E    G +Y+GC  D    R+    +  + MT  +CA+ CE   +FG+QYG                      EC+CG+  +D D  +HG A C   C GD +  CGG  A +++
Sbjct:   24 VIDKNRCCNPRVSSVFNREAKIDITCKPKKDNVIDWDCIFGEDSEEEVLKYRSKDKKERATHTSCTDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWKDATGEWVHVTIDTVFGESMEVKFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTSPEESPSPSSKENDSKGHLYLGCFEDEKDKRIFGKKYVDAHMTTAICADLCEDSKYFGMQYGNEACKKICDKEXXXXXXXXXXXECFCGARKEDYD--KHGPAICHMKCPGDSDLVCGGGRAQNVF 407          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: D7G946_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G946_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 5.750e-66
Identity = 114/205 (55.61%), Postives = 145/205 (70.73%), Query Frame = 1
Query:  205 LSGNTIDWECVFGVGSLVEAEARGGKLVSCPSGTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKES--GNVEGMDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYH-IKNKV 810
            L    IDW+CVFG  SL E   RGG   +CP  TK  PCSRFIV K++ER+EV  Q+G  GF F  GE Y+F YSF+A E M+V+   T +GQ+KG + G+ +KG+P++SLTAN +G++VRF+N ES     +G+D  L W+ + GEWVHVEI TTFG+SMEV  SGAV GKAVWPS  KPVAW+ D++ V +KLGLYH I N V
Sbjct:  111 LKDYQIDWDCVFGPESLEEVFQRGGDFTTCPGATKAHPCSRFIVDKDEERSEVKVQEGPEGFPFLYGEEYIFKYSFQAIEDMQVATRFTHLGQLKGSAGGYMVKGDPIYSLTANKHGLHVRFSNLESIEDYHDGLDMPLDWDAATGEWVHVEIITTFGQSMEVNISGAVSGKAVWPSDLKPVAWHRDSEMVRMKLGLYHSIHNNV 315          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: A0A6H5K5S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5S3_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 5.820e-55
Identity = 121/292 (41.44%), Postives = 156/292 (53.42%), Query Frame = 1
Query:  127 DVINEGTC---PIDSTTGQCQRFDKVCGVLSGNTIDWECVFGVGSLV-----------------------EAEARGGKLVSCPSGTKVE------------PCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESMKVSGSSTRIGQMKGVSSGFQ-LKGNPLFSLTANNNGINVRFNN--KESGNVEGMDE-YLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTS 876
            DVI +  C    + S   +  R D  C     N IDW+C+F    LV                       + E    +++   S  K E            PCSRFIVPK  +RAE     G  GF F KGE Y++ YSFRA E MK+    T IGQ+KG  +G Q + G+P+ S++AN +G++VRF+N  K   +    D  Y +WED+ GEWVHV I T FG+ MEV F+G V GK VWP    PVAWNN      +KLGLYH + +V D EVE ++VSIEGP G+IRTS
Sbjct:   30 DVIVKNRCCNPRVSSMFNREARIDITCEPKKDNVIDWDCIFVSVKLVAVPLINVLRTNTRSSSPPRFDLLKGEDSEEEVLKYRSKDKKERATHTSCTDKDRPCSRFIVPKNVQRAETKVAYGPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGDPIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWEDATGEWVHVTIDTVFGEFMEVEFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVGDGEVEIRDVSIEGPNGIIRTS 321          
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Match: D7FK18_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK18_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 3.330e-40
Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 1
Query:  646 HVEIQTTFGKSM--EVIFSGAVDGKAVWPSSYKPVAWNNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQGGPEGVMYVGCVRDRSTDRVLNNL-FRSSDMTIEMCAEYCEGEDFFGLQYGLECWCGSANDDEDVFRHG-SATCEFPCSGDDE-ETCGGYWALSL 1173
            H++    FG     EV  SGAV+G+AVWPS+ KPVAW+ DAD V +KLGLYH  ++V D +VEY+++SIEGP G+IRTS    PD    EG +YVGC  D   D V +   +  + MT EMCA+ C+G  +FG Q G ECWC ++ D     +HG S +C   C G    ETCGG  +LS+
Sbjct:   30 HIDWDGVFGPGSLDEVRLSGAVEGRAVWPSNLKPVAWHRDADRVRMKLGLYHKTDQVYDGKVEYRDISIEGPNGIIRTSPE--PDH---EGHLYVGCFADDDDDHVFSGKKYVDAHMTNEMCADLCDGTRYFGTQGGTECWCSASKDRPR--KHGKSKSCNKACPGTSRTETCGGRSSLSV 203          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2145.6558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDH2_ECTSI1.630e-26376.37WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LDH3_ECTSI1.510e-21569.58WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXY2_9PHAE1.660e-19961.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQZ0_9PHAE4.920e-19861.93WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JBB3_9PHAE2.980e-17258.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KAW5_9PHAE1.090e-13246.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDJ9_ECTSI3.030e-8139.64Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
D7G946_ECTSI5.750e-6655.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5S3_9PHAE5.820e-5541.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK18_ECTSI3.330e-4047.51WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2145contigL-elsbetiae_contig2145:7554..13846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score740.7
Seed ortholog evalue4.4e-211
Seed eggNOG ortholog2880.D8LDH2
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionWSC-domain containing protein
Ec32 orthologEc-15_000630.1
Exons11
Model size1494
Cds size1494
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2145.6558.1prot_L-elsbetiae_contig2145.6558.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig2145 7554..13846 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815876.3957403-CDS-L-elsbetiae_contig2145:7553..75951622815876.3957403-CDS-L-elsbetiae_contig2145:7553..7595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 7554..7595 +
1691683161.9904315-CDS-L-elsbetiae_contig2145:7553..75951691683161.9904315-CDS-L-elsbetiae_contig2145:7553..7595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 7554..7595 +
1622815876.4091115-CDS-L-elsbetiae_contig2145:8428..85541622815876.4091115-CDS-L-elsbetiae_contig2145:8428..8554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 8429..8554 +
1691683162.0012674-CDS-L-elsbetiae_contig2145:8428..85541691683162.0012674-CDS-L-elsbetiae_contig2145:8428..8554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 8429..8554 +
1622815876.4185152-CDS-L-elsbetiae_contig2145:9076..92341622815876.4185152-CDS-L-elsbetiae_contig2145:9076..9234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 9077..9234 +
1691683162.0096674-CDS-L-elsbetiae_contig2145:9076..92341691683162.0096674-CDS-L-elsbetiae_contig2145:9076..9234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 9077..9234 +
1622815876.4292264-CDS-L-elsbetiae_contig2145:9538..98961622815876.4292264-CDS-L-elsbetiae_contig2145:9538..9896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 9539..9896 +
1691683162.0180345-CDS-L-elsbetiae_contig2145:9538..98961691683162.0180345-CDS-L-elsbetiae_contig2145:9538..9896Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 9539..9896 +
1622815876.4396522-CDS-L-elsbetiae_contig2145:10449..105721622815876.4396522-CDS-L-elsbetiae_contig2145:10449..10572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 10450..10572 +
1691683162.026251-CDS-L-elsbetiae_contig2145:10449..105721691683162.026251-CDS-L-elsbetiae_contig2145:10449..10572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 10450..10572 +
1622815876.451967-CDS-L-elsbetiae_contig2145:10693..107951622815876.451967-CDS-L-elsbetiae_contig2145:10693..10795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 10694..10795 +
1691683162.0343275-CDS-L-elsbetiae_contig2145:10693..107951691683162.0343275-CDS-L-elsbetiae_contig2145:10693..10795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 10694..10795 +
1622815876.464215-CDS-L-elsbetiae_contig2145:11326..114131622815876.464215-CDS-L-elsbetiae_contig2145:11326..11413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 11327..11413 +
1691683162.0419958-CDS-L-elsbetiae_contig2145:11326..114131691683162.0419958-CDS-L-elsbetiae_contig2145:11326..11413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 11327..11413 +
1622815876.4810147-CDS-L-elsbetiae_contig2145:11852..120101622815876.4810147-CDS-L-elsbetiae_contig2145:11852..12010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 11853..12010 +
1691683162.0501308-CDS-L-elsbetiae_contig2145:11852..120101691683162.0501308-CDS-L-elsbetiae_contig2145:11852..12010Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 11853..12010 +
1622815876.497579-CDS-L-elsbetiae_contig2145:12358..125061622815876.497579-CDS-L-elsbetiae_contig2145:12358..12506Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 12359..12506 +
1691683162.066398-CDS-L-elsbetiae_contig2145:12358..125061691683162.066398-CDS-L-elsbetiae_contig2145:12358..12506Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 12359..12506 +
1622815876.5117872-CDS-L-elsbetiae_contig2145:13048..131101622815876.5117872-CDS-L-elsbetiae_contig2145:13048..13110Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 13049..13110 +
1691683162.077702-CDS-L-elsbetiae_contig2145:13048..131101691683162.077702-CDS-L-elsbetiae_contig2145:13048..13110Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 13049..13110 +
1622815876.5211954-CDS-L-elsbetiae_contig2145:13716..138461622815876.5211954-CDS-L-elsbetiae_contig2145:13716..13846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 13717..13846 +
1691683162.088687-CDS-L-elsbetiae_contig2145:13716..138461691683162.088687-CDS-L-elsbetiae_contig2145:13716..13846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig2145 13717..13846 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig2145.6558.1

>prot_L-elsbetiae_contig2145.6558.1 ID=prot_L-elsbetiae_contig2145.6558.1|Name=mRNA_L-elsbetiae_contig2145.6558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=498bp
MVRMKLGLYHSPHNVADGDVIYRDVSIEGPKGIIRTSPPSDDDVINEGTC
PIDSTTGQCQRFDKVCGVLSGNTIDWECVFGVGSLVEAEARGGKLVSCPS
GTKVEPCSRFIVPKEQERAEVLAQQGVGGFQFKKGETYVFHYSFRAKESM
KVSGSSTRIGQMKGVSSGFQLKGNPLFSLTANNNGINVRFNNKESGNVEG
MDEYLSWEDSAGEWVHVEIQTTFGKSMEVIFSGAVDGKAVWPSSYKPVAW
NNDADSVMLKLGLYHIKNKVADAEVEYKNVSIEGPTGVIRTSTLGVPDQG
GPEGVMYVGCVRDRSTDRVLNNLFRSSDMTIEMCAEYCEGEDFFGLQYGL
ECWCGSANDDEDVFRHGSATCEFPCSGDDEETCGGYWALSLYEYGSELPI
DTPVGSRYLGCYKDHRFERALSLKLTTSGDMTHEWCMDFCSEFKAKYYGL
QFGRECFCGSADEDYDQYGTATCDMPCAGDPSLICGGALALSTFMTY*
back to top

mRNA from alignment at L-elsbetiae_contig2145:7554..13846+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig2145.6558.1 ID=mRNA_L-elsbetiae_contig2145.6558.1|Name=mRNA_L-elsbetiae_contig2145.6558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6293bp|location=Sequence derived from alignment at L-elsbetiae_contig2145:7554..13846+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCCGCATGAAGCTTGGACTGTACCACTCACCCCACAACGTGAGCCT GTTTTACAAAAGATGGGTGCCCCTACTCATTCCACGACTGCACGCTTGCC GGCCAACAGCCAAACTATCGGGCGAGCGGGTGCCTTACTGTGCCTGCACG TAGCGGTGATGGCGAGGTTTGTTCGAAGCAGAGAAGAGAACAAAAACAGT TTTATTGAAACCGTAGAATTTGTCCGTAGAATCACCCAAGGGGGTGTAGA AGGATTCCAGCAGGGAACCCCTTGAAGGAAAGATCGCACATCGATCACTT TACCGGAAGCCAGTCGTCCACTCATAGAGTGGGGCGCCAAAGAGATAGCG CAGAACCAGATGGTAGTTGACACGCAAAGGCTGAACGTAATTAGGCCAGC TGAAGCAGAGCCAAGGAGTCGAGCGCTCGAGTCTGGAGTCTTTTTCCCGC CCACCCACCTGTTGTTTCTTTCGAAGGTGGAGGAGGGGAAGAGGCGAAGG AAATGGTAGAGTACCATTTGGGGACTTGGTCATCAGAGACTACTTCGTGC AGTAAGAGTAGTTTTCCCTTTGCACCGGGGGAACCCCGGCGGTGTTTTAG GGAAGAGAGAGTGGATTTTAGGAAGTTGACGAGACAGGGCTTTTGCCCGT CTCGTCTCTCTCTTCCCTTCGGGGTCCTGGAAAGTATAATAAACGGCAAA AGAAAAAACAATAAAGGGCAGATTTATTGCGTAAAGTCAGCCTCCTGTTC ACATCGTGCTTGTATTCAACAGCCAAAGATGAACATTTCTAGGTACATAC TTCTCACCATCGGTTCTTTTTTTTACGCCCTTCGTGTCTTTCTCCACTCT TGCCCTCATCTCCCTTAATTTTTAGGTGGCCGATGGTGACGTCATTTATC GTGACGTATCGATCGAGGGCCCGAAGGGTATAATCCGGACGAGCCCTCCG TCGGACGATGACGTGATCAATGAAGGCACATGTCCAATCGATTCAACCAC GGTGGGTAGCATGGATCGGTGCTTTTAAGGTTGCGAGATTGGGATCTAGT ATGGAGAAAAGCGGCAGAATTTGCGCGTTTGGCATGTATTATCGATATTC AGCCACACCTCGATGCATGTAGGTCCTTGCCAAGAAAGGCTTGAGGATCG ATAATGCCAATAAATAGCTCAAGGTCTGATTTTCCTCTGGTGTGCAATAT GTTCGACACACTGCAGCTTCCTGCCGAAATCACCGGGAGAAGATTCACAG TTAACTTCGACCTCCGCAATTTTTGTCTCTGGACCCCTCACGTCCAAATT GCACACCCGAGAGCGAGCGTATCAATTGTTTTAGAAGAAGTGCACTCGAT CGGACAGCTCTATTCTCCGACGTATTCCGTAAATTTTTCATCCCTTCTGC AAGACCGCGCCGATCCCTCTTTCATTTCGTTTACTCACGCCCATTCGCTT TGCCCGTCTCTTACAAAAGTATCCTTGTCGTCCCCGACTAACGTTTCTGC CACAATATACAATGTGAACAAAGGGACAATGCCAAAGGTTTGACAAGGTT TGCGGAGTCTTGAGTGGCAACACGATCGACTGGGAGTGCGTTTTCGGCGT CGGTTCACTTGTTGAGGCTGAAGCACGCGGAGGAAAACTGGTATCGTGTC CTTCCGGCACTAAAGTGGAGCCGTGCTCCAGGTATGGATCGGTCCACGAG ACGAAAACGATGAGACTCGGGAGTTTAGGGGCATGGAATTCGTCCGTGAT ACTCAGCCCTACTCCCTAACGTATGCAGGCATAACGCTCGTCGCACCCAT GGACTTTCCACGCATGTACGGGCCCGTTAACGCGACCTTCGCGTTCTGTA CGCCGCTTGAAATAAGATGTATTGTGCACCCATTACAGCGATTTGAGAGA GGGAGAAAACATGATGCGATCGTTTCGGCAAATCTCTGTGAAATACGATT CCGCCGCCGCCCGCTTCCGGTCGACTTTACACCAGGTTTATCGTCCCTAA AGAGCAAGAGCGCGCGGAAGTCTTGGCGCAACAGGGCGTCGGGGGCTTCC AGTTTAAAAAAGGAGAGACTTATGTGTTTCACTATAGCTTCCGAGCGAAG GAGAGCATGAAAGTGTCTGGTTCTTCCACGAGGATTGGACAGATGAAAGG CGTTTCTAGCGGCTTTCAGCTCAAGGGAAACCCTCTGTTCTCACTCACCG CGAACAACAACGGAATTAACGTGCGCTTCAACAACAAGGAATCAGGCAAC GTCGAAGGAATGGATGAATATTTGAGCTGGGAGGACAGTGCTGGAGAATG GGTTCACGTGGAAATCCAGACAACCTTCGGCAAGTCCATGGAGGTGAGTG TGGTATGTGCAAAGAAAGGTGGAAAGTGAAATGTACGTACCAATCTGCAC GTCGAACAAAGTTATCGCGTCAATGTAGGGAATAAATCACCACAGAGAAG TGCTTCTCAACCTCCACAAACCAAGGGACGTTTGTAGAATCACAGCAGCA GGTGTTTTCGACGGTGTCATGAACATCTTCTGACCAACTAGACAGATACA GCAGCAGTACAAATATTCCGTACACATCTGGGCATATCAATGTGAATCAC TATTTACTCAAAGCTCGGGATGACCTGCAGCGTCGCGTACATAAAAAAAT ATTTTCTTTGTACCAGGTTATGTATGCATGTGTTTCCTGCTTGGCAGATT TATACGGAGTATCTATCTGTGTAAGTACGTACGTGCGTCCAGTTATGCCA AGGTTTGGAACTTCGCTTCACCCAAGTGGACGCACCCGCTTAACCCTAAT CCAAAGGGTAGGCTCGCTTACGGAACAACTGTAATATCGATTACACGCAT TCATGGCTTACTCAACTCGCGTTGAACCTGGCTGTACATTTTGAAGGTGA TTTTTTCTGGCGCCGTGGACGGTAAGGCAGTGTGGCCCTCCAGCTACAAG CCCGTGGCCTGGAACAACGATGCTGATTCGGTCATGCTCAAACTCGGGCT CTACCACATCAAGAATAAGGTGGGAACATGATCTGATTGCCATAGTATGT ACTACAGCGCTATTACAGTCTAGGTAAGCACTTACATTGCCGAACATGCA ACAGGGTTAACCTAACTTGGAGACATCTTGGCATTTTAAGGTGGCGGATG CCGAAGTGGAGTACAAGAACGTCAGCATCGAAGGACCTACCGGAGTTATC AGGACTAGCACCCTCGGCGTCCCTGACCAGGGCGGCCCCGAGGTATCCCA GCTTGCCTGCGTGCAGTTTACAGTAGGTCTGATATTTACCTACCAAGGTA TATACCTGTCTAGACTACGTAGCATGTCTAGACTAGATATCAGCCCACAG ATATACGAACAGATGTGCGATCGAGACCGCGCTCGCAGCCTTGTCTTGAT CTGCCTTAACATAGTCTGAACTGCGTATCTGCTTGAACTACTAGCGGTGC TCCATGTTGCTACGCTATTCAGTATGTGTGATTGTGTGAACCCTGCTTCG GCCCCATTTGGCGCTAATAAAAAATTGGAATTACAAATTGCGCGCGGTGT GGCGGATTTCAATTTTCGTCTGAAAAATGCAGTTTCGGTTCGGCAGCCGT CATGTCCGATTCCGCCGCATATACGGTTCAGCGGCCTGGTTTGCCCGTTC GCCCGTCCTCGACCCTGTTCCCTCTTCCCTGTCGCTCCTGCGATTGTAAC TGCCGGCTGTGCATAAAATTTCCTTGTCGCGTGCGCTACTGTCGATTTCA TTGGCTCATGTGACCATCCCCAGGGAGTAATGTACGTTGGTTGTGTACGC GACAGGAGCACCGATCGCGTCCTCAACAATCTGTTCCGCAGCAGCGACAT GACGATCGAGGTGAATGGGCGTGCATCACGAATCTGTTTGACCACACCCC GGCGCAAACACTGGTAACAGTATATAAATGGTCTGTTCCAGAAATGTTCA CCGCACCCCCCTTGGTGTAAAGAACGGCCCCCAGCTGGGTGGGTTTGGGA ACCGCGAAGATCTTAGTCCTAGATATCCTAGATACATATATACGTGTTGT GTACATAGTCTATACTACATACGCTGTAATCGTATGTTATGACCAAGGTA TGTACATGTAGTATGCACTCGGGCATCGTTCGAGCAAGAAACGCCTAATA TAATGGTTTTCAGGCCATGAGCTAAAATTCTACCGCCGTGCCGTTGTCTC GAAGTAGCTGTGGCACTTATCTAGATCCTTGGTTCTCAAAATATCTGGAC TTATCTAACATTTTGTTTTCCTTATCGTGCTTGTCCCACTACTGCAAAGA TGTGTGCCGAATACTGCGAGGGAGAGGACTTCTTCGGCTTACAATACGGC TTGGAATGCTGGTGCGGCTCGGCCAACGATGACGAAGATGTTTTCCGCCA CGGCTCGGCAACGTGCGAGTTCCCATGCTCGGGAGATGACGAGGAGACAT GCGGGGGGTACGTGGTCAAGACACGCTGCGTGCGTTTTGGTGTTTCTCTA GCAATACCGTGCGGTTAATAGCGTCTCTTCTTTATACATGCATACCAACG CATGTTTCGACTTCGCGATGTAAGTGCAATGGGGACCCGATCGAGTTTCA TCTCTACACAGCAACCTTTCATGTGTTACATATAGTCTAGACTACATAGT CTAATGGCCAATTTTTGTGCGCGACTCTCCGGTTGAGGTTAGTTTGGTCG TGAAAAGGGCGAGCCTGCGAAAAAGATAAAATCGTGGTATTTCCACACGG TGTCGAAGAGATCAGAACATTGACCTTCGCGATCAATTGCTATTTTCAAC ACCAGGTACTGGGCGCTGAGCTTGTACGAGTATGGTAGTGAGCTACCTAT CGACACTCCAGTCGGTTCCAGGTACCTCGGCTGCTACAAGGATCACCGTT TCGAGCGTGCCTTATCCTTGAAGTTGACGACGAGCGGCGACATGACCCAC GAGGTAAGGGACGAAGTGTGCGTTCTGTGATACGTAAAACACGAGCAGCT GAGCAGAGTAAGTATTGGACAGATTCTTAGCTGATGGCGGCGGAAATATT TTAACTGCGGGTTCGTTATCAATGTCCGATTTAGTTTATGTTGATCGTTG AGGCCCCCCTTTCTGTGTTTGTTTGTTTTTGCAATTTCTCTTGCCCATTG CATTTAGGGAAATTGCACACTGTCGTGGAACATCATATTAGCGTTTGGTT GTCGAACACAACAACCGTGAGTCGTTCGTATCTCGAGTCGGCGAAAACGC CGGTAGGCCCTCTCTCAACTCCAAAATTCAAGGCCTAGACTAGGTATGTA GAAGAAAATATACATATCTACCGATGGAATTCAGGCTGGTTTCACTCTGT ACCATGCACCTACATAGCCTTGCTATTTCTGCACGTAGAGGGCAATCATG TTTTCCACAATTAATCAATGTGTTTGTATAGCTGCAAATGCTGAAACGCA CGTACCGCTGGCCTCTTCGCTGATCGATGTGTCTGTACACTTCAGTGGTG CATGGACTTCTGCTCCGAGTTCAAGGCGAAGTACTACGGCCTTCAGTTTG GAAGAGAGTGAGTCCCAAATATTCCGATGCAGAAAATCTCCAATGGTATT TACGAAGTCCTAACACGTCCTTCCTTAATTTGAGGTGACTTGTACTTGAG AATTTCTTGGAACCAAGACAGAATATGGGGTGTCACGAGCGTTCTTGTCC CGGGTTATGCTTCGCTCCTCGTTCCTGCTCGATCCAACGACTTCCAATAC TTTAATGGTTTTCTTAAACGTTTGATGCTCGTAGTGTTGCCCTCTCACCG CGTACACCCGCCAAGTTGCCGGTATATTTATATATCTAGCGGGATACAGG TAGCCACAAACATGTTGCCATCACGACAAAGGTCTCTCGATGTGTTCATT TCCATGTTAAGAGTGTGGTACAAACCTTACCAGTGTAGTTGTGCCTAATG CAGAGATTCCTCTTGCAAAGTGTGAAATCATCCACTCTTCTTCGCACTTC CCCAAACCCTCTTGGGTGGAAGTTACTACTCGAAGCACTGGCCAGGACCA GAACTAGGCATGTTCCCAGCAAACCCAGTGTTGGGGAAAACGATGAGAAA CGCACTTCCGTCCACGCATGTCTGAGAATGCCGCAAATGTTATCCGTGTG ACGATTTTTACAGATGTTTCTGTGGAAGCGCCGACGAGGACTACGACCAG TATGGCACAGCAACTTGTGACATGCCTTGCGCAGGAGACCCGAGCCTCAT CTGCGGTGGCGCGCTGGCCTTGAGCACCTTCATGACATACTAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig2145:7554..13846+

>mRNA_L-elsbetiae_contig2145.6558.1 ID=mRNA_L-elsbetiae_contig2145.6558.1|Name=mRNA_L-elsbetiae_contig2145.6558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2988bp|location=Sequence derived from alignment at L-elsbetiae_contig2145:7554..13846+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCCGCATGAAGCTTGGACTGTACCACTCACCCCACAACATGGTCCG
CATGAAGCTTGGACTGTACCACTCACCCCACAACGTGGCCGATGGTGACG
TCATTTATCGTGACGTATCGATCGAGGGCCCGAAGGGTATAATCCGGACG
AGCCCTCCGTCGGACGATGACGTGATCAATGAAGGCACATGTCCAATCGA
TTCAACCACGGTGGCCGATGGTGACGTCATTTATCGTGACGTATCGATCG
AGGGCCCGAAGGGTATAATCCGGACGAGCCCTCCGTCGGACGATGACGTG
ATCAATGAAGGCACATGTCCAATCGATTCAACCACGGGACAATGCCAAAG
GTTTGACAAGGTTTGCGGAGTCTTGAGTGGCAACACGATCGACTGGGAGT
GCGTTTTCGGCGTCGGTTCACTTGTTGAGGCTGAAGCACGCGGAGGAAAA
CTGGTATCGTGTCCTTCCGGCACTAAAGTGGAGCCGTGCTCCAGGGACAA
TGCCAAAGGTTTGACAAGGTTTGCGGAGTCTTGAGTGGCAACACGATCGA
CTGGGAGTGCGTTTTCGGCGTCGGTTCACTTGTTGAGGCTGAAGCACGCG
GAGGAAAACTGGTATCGTGTCCTTCCGGCACTAAAGTGGAGCCGTGCTCC
AGGTTTATCGTCCCTAAAGAGCAAGAGCGCGCGGAAGTCTTGGCGCAACA
GGGCGTCGGGGGCTTCCAGTTTAAAAAAGGAGAGACTTATGTGTTTCACT
ATAGCTTCCGAGCGAAGGAGAGCATGAAAGTGTCTGGTTCTTCCACGAGG
ATTGGACAGATGAAAGGCGTTTCTAGCGGCTTTCAGCTCAAGGGAAACCC
TCTGTTCTCACTCACCGCGAACAACAACGGAATTAACGTGCGCTTCAACA
ACAAGGAATCAGGCAACGTCGAAGGAATGGATGAATATTTGAGCTGGGAG
GACAGTGCTGGAGAATGGGTTCACGTGGAAATCCAGACAACCTTCGGCAA
GTCCATGGAGGTTTATCGTCCCTAAAGAGCAAGAGCGCGCGGAAGTCTTG
GCGCAACAGGGCGTCGGGGGCTTCCAGTTTAAAAAAGGAGAGACTTATGT
GTTTCACTATAGCTTCCGAGCGAAGGAGAGCATGAAAGTGTCTGGTTCTT
CCACGAGGATTGGACAGATGAAAGGCGTTTCTAGCGGCTTTCAGCTCAAG
GGAAACCCTCTGTTCTCACTCACCGCGAACAACAACGGAATTAACGTGCG
CTTCAACAACAAGGAATCAGGCAACGTCGAAGGAATGGATGAATATTTGA
GCTGGGAGGACAGTGCTGGAGAATGGGTTCACGTGGAAATCCAGACAACC
TTCGGCAAGTCCATGGAGGTGATTTTTTCTGGCGCCGTGGACGGTAAGGC
AGTGTGGCCCTCCAGCTACAAGCCCGTGGCCTGGAACAACGATGCTGATT
CGGTCATGCTCAAACTCGGGCTCTACCACATCAAGAATAAGGTGATTTTT
TCTGGCGCCGTGGACGGTAAGGCAGTGTGGCCCTCCAGCTACAAGCCCGT
GGCCTGGAACAACGATGCTGATTCGGTCATGCTCAAACTCGGGCTCTACC
ACATCAAGAATAAGGTGGCGGATGCCGAAGTGGAGTACAAGAACGTCAGC
ATCGAAGGACCTACCGGAGTTATCAGGACTAGCACCCTCGGCGTCCCTGA
CCAGGGCGGCCCCGAGGTGGCGGATGCCGAAGTGGAGTACAAGAACGTCA
GCATCGAAGGACCTACCGGAGTTATCAGGACTAGCACCCTCGGCGTCCCT
GACCAGGGCGGCCCCGAGGGAGTAATGTACGTTGGTTGTGTACGCGACAG
GAGCACCGATCGCGTCCTCAACAATCTGTTCCGCAGCAGCGACATGACGA
TCGAGGGAGTAATGTACGTTGGTTGTGTACGCGACAGGAGCACCGATCGC
GTCCTCAACAATCTGTTCCGCAGCAGCGACATGACGATCGAGATGTGTGC
CGAATACTGCGAGGGAGAGGACTTCTTCGGCTTACAATACGGCTTGGAAT
GCTGGTGCGGCTCGGCCAACGATGACGAAGATGTTTTCCGCCACGGCTCG
GCAACGTGCGAGTTCCCATGCTCGGGAGATGACGAGGAGACATGCGGGGG
ATGTGTGCCGAATACTGCGAGGGAGAGGACTTCTTCGGCTTACAATACGG
CTTGGAATGCTGGTGCGGCTCGGCCAACGATGACGAAGATGTTTTCCGCC
ACGGCTCGGCAACGTGCGAGTTCCCATGCTCGGGAGATGACGAGGAGACA
TGCGGGGGGTACTGGGCGCTGAGCTTGTACGAGTATGGTAGTGAGCTACC
TATCGACACTCCAGTCGGTTCCAGGTACCTCGGCTGCTACAAGGATCACC
GTTTCGAGCGTGCCTTATCCTTGAAGTTGACGACGAGCGGCGACATGACC
CACGAGGTACTGGGCGCTGAGCTTGTACGAGTATGGTAGTGAGCTACCTA
TCGACACTCCAGTCGGTTCCAGGTACCTCGGCTGCTACAAGGATCACCGT
TTCGAGCGTGCCTTATCCTTGAAGTTGACGACGAGCGGCGACATGACCCA
CGAGTGGTGCATGGACTTCTGCTCCGAGTTCAAGGCGAAGTACTACGGCC
TTCAGTTTGGAAGAGATGGTGCATGGACTTCTGCTCCGAGTTCAAGGCGA
AGTACTACGGCCTTCAGTTTGGAAGAGAATGTTTCTGTGGAAGCGCCGAC
GAGGACTACGACCAGTATGGCACAGCAACTTGTGACATGCCTTGCGCAGG
AGACCCGAGCCTCATCTGCGGTGGCGCGCTGGCCTTGAGCACCTTCATGA
CATACTAGATGTTTCTGTGGAAGCGCCGACGAGGACTACGACCAGTATGG
CACAGCAACTTGTGACATGCCTTGCGCAGGAGACCCGAGCCTCATCTGCG
GTGGCGCGCTGGCCTTGAGCACCTTCATGACATACTAG
back to top