mRNA_L-elsbetiae_contig214.6541.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig214.6541.1 vs. uniprot
Match: D8LBX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX5_ECTSI) HSP 1 Score: 290 bits (742), Expect = 1.840e-83 Identity = 189/330 (57.27%), Postives = 219/330 (66.36%), Query Frame = 1 Query: 430 MATHFGHAFTAELTTQDVKAFSKAIEVFQGIRQRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGVRREV---------ARNGEEXXKEKESGKWNLEKEVELMAKDPDVSECLQHATARLGQLAKVAGVYVDAYMALSLVEFGLGGLLQRLPGLLPVVQTTIEKKGFTIGISNLNLRGVVFPASEIRLSFRGTSLPPRGSIVETNTPFGRGRVVRYMKRTHSLCVELLNCPLRSGSNRFARAFVQPGNVVVVDVDSDEDVPAGRVIDGAPAASXXXXXXXXX------PPG--PPIPAGSVGGSASSRPALHSRAAAKTILAASSL 1368 MA FGHA TAE+T QDV+ SKA+ V QGI +RRK XXXXXXXXXX GE +GKWNLE+EVEL++KDP+V++ L HAT RL LA+VAGVYVD YMALS++EFG GGLLQRLP LLPVVQTTI+KKGFTI ISNLNL GVVFP S+IR SF+GTSLPP GS VET+TPFGRGRVVRYMKRTHSLCVELL+ PLRSG ++ARAFVQPG+VVV++ D D+ G + AA+ PPG P G SSRP+LH+RAAAKT+LAASSL Sbjct: 1 MAAQFGHALTAEITAQDVETVSKAVSVLQGILRRRKALKASEASTGGAVAAGAADAXXXXXXXXXXXXXXXXXXXXXXXXXXTEGGEG------TGKWNLEQEVELLSKDPEVAKSLLHATERLRGLARVAGVYVDTYMALSVLEFGFGGLLQRLPRLLPVVQTTIQKKGFTIKISNLNLGGVVFPRSDIRFSFQGTSLPPHGSTVETSTPFGRGRVVRYMKRTHSLCVELLSFPLRSG--QYARAFVQPGDVVVIEPDQDKISDRGGAAVASTAAAAGAAEGTSASESLAQPPGLLNPDSIFGEGDDESSRPSLHTRAAAKTLLAASSL 322
BLAST of mRNA_L-elsbetiae_contig214.6541.1 vs. uniprot
Match: A0A6H5JK16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK16_9PHAE) HSP 1 Score: 243 bits (621), Expect = 5.530e-67 Identity = 138/221 (62.44%), Postives = 162/221 (73.30%), Query Frame = 1 Query: 730 DPDVSECLQHATARLGQLAKVAGVYVDAYMALSLVEFGLGGLLQRLPGLLPVVQTTIEKKGFTIGISNLNLRGVVFPASEIRLSFRGTSLPPRGSIVETNTPFGRGRVVRYMKRTHSLCVELLNCPLRSGSNRFARAFVQPGNVVVVDVDSDEDVPAGRVIDGAPAASXXXXXXXXXPPGPPIPAGSV--------GGSASSRPALHSRAAAKTILAASSL 1368 DP+V + L HAT RL LA+VAGVYVD YMALS++EFG GGLLQRLP LLPVVQTTI+KKGFTI +SNLNL GVVFP S+IR SF+GTSLPP GS VETNTPFGRGRVVR+M RTHSLCVELL+ PLRSG ++ARAFVQPG+VVV++ D D++ G + AA+ P G + G S RP+LH+RAAAKT+LAASSL Sbjct: 36 DPEVLKSLLHATERLRGLARVAGVYVDKYMALSVLEFGFGGLLQRLPKLLPVVQTTIQKKGFTIKVSNLNLGGVVFPRSDIRFSFQGTSLPPHGSTVETNTPFGRGRVVRHMNRTHSLCVELLSFPLRSG--QYARAFVQPGDVVVIEPDQDKNSDGGGPAIASTAAAAGAAEGTSASESLAQPTGLLNPDSIFGEGDDESPRPSLHTRAAAKTLLAASSL 254
BLAST of mRNA_L-elsbetiae_contig214.6541.1 vs. uniprot
Match: D7FKK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK6_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 1.150e-14 Identity = 49/84 (58.33%), Postives = 64/84 (76.19%), Query Frame = 1 Query: 181 IIDSMEGRNVGDLIDQAMEQLEITGVIGSEQLMERLRERAARDLGRLRAKAGMGS-VGLSEGDLASCAANAAPGAIEEARLMAA 429 +ID +G G ++D+ + QLE+ GV GSEQL++RLR RAARD RLRAKAG+ S V L++ D+ S A +AAPGAIEEARL+AA Sbjct: 1 MIDWTDGITFGGVMDRVLHQLEMAGVTGSEQLVKRLRGRAARDYSRLRAKAGIASTVDLTDEDIFSSAVDAAPGAIEEARLVAA 84 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig214.6541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig214.6541.1 >prot_L-elsbetiae_contig214.6541.1 ID=prot_L-elsbetiae_contig214.6541.1|Name=mRNA_L-elsbetiae_contig214.6541.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=481bp DVEGEAIAVAAKVSELVRKKDMLEALRVARLVQVAPLLEELTSHTALGPKback to top mRNA from alignment at L-elsbetiae_contig214:36819..44053- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig214.6541.1 ID=mRNA_L-elsbetiae_contig214.6541.1|Name=mRNA_L-elsbetiae_contig214.6541.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7235bp|location=Sequence derived from alignment at L-elsbetiae_contig214:36819..44053- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig214:36819..44053- >mRNA_L-elsbetiae_contig214.6541.1 ID=mRNA_L-elsbetiae_contig214.6541.1|Name=mRNA_L-elsbetiae_contig214.6541.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2886bp|location=Sequence derived from alignment at L-elsbetiae_contig214:36819..44053- (Laminarionema elsbetiae ELsaHSoW15)back to top |