mRNA_L-elsbetiae_contig212.6461.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig212.6461.1 vs. uniprot
Match: D7FHW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW6_ECTSI) HSP 1 Score: 333 bits (853), Expect = 1.310e-102 Identity = 246/502 (49.00%), Postives = 295/502 (58.76%), Query Frame = 1 Query: 361 MEDRIKLEVQSNVSRSSPVNQRVSLSERAAEAVRQRVDGLAEEVASLGEIVRKSNAST---ATALEQLLAGEQRNRSAVILLETWRGDCEGWCARTGDSLASLTEDSRALARRAHTQQKVLDEAVIAQEDLAVSVKSARKIGEVASASAMAPIREHFLKEIESIRRRLLELESTAHKATTEAGPDATPEKFRWIAREEASAKAEEVWRKMETSMREHGSAEAKERADAAVVAIDRLEIHLAEVVQRVGSHGFAIDALQRADIKALREAPSARDAMKALEKKLVDGLARIDNELSESRRAXXXXXXXXAANT--------QVAKSCSEAPAVGKEDLKPLLTRLEELERSRDRPSG-DLAPAAAVAPPLVSVEKVEGIAATVQELASGAGGWNRRQATLENNLEEVSETLNGHTLKLRCLEGLWRQQAPHNTTGENVAGGADSGEHSGTDASGEKLDVSPRAEGEGCPPAPAAPALRAGFSGLLKRLGSNPLSMSSSQKEVRT 1830 MEDRIKLEVQ+ V R V+QRVSL+ERAAEAVRQRVDGLAEEVASLGEIVR+S+A+T ATALEQL A +QR RS V LLETWR D EGWCART +SL SLTEDSRAL+RRAHTQQK L E +AQEDLAV VKS R++GE ASASAMAPIREHFL+EIE+IRRRL LE+ A T A P + IA EEASAKAEEV R RV ++G A++ ++A+ R A RD M+AL+K+L + LARID+EL + R A QV +S S+ G++DLKPL RL+ELER +R + DL PA AP +VEKVEGIA TVQE+A GA +R++A EN+ R + L +QQ +++ GA + V A A APA R G SGLLKRLGSN S+SS QKEV T Sbjct: 1 MEDRIKLEVQTVVRRD--VDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHATALEQLQASQQRTRSTVTLLETWRADREGWCARTSESLHSLTEDSRALSRRAHTQQKALGEVEVAQEDLAVLVKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALENEAQTTATAAVSGVDPTMVKSIAVEEASAKAEEVER-------------------------------------RVSAYGPALETHKKAEGDISRGALGVRDTMEALQKRLAENLARIDDELCDLRSRHDRNAAKTAETAALSAIEQQQVTQSVSDG-LDGRQDLKPLAKRLDELERLWERKTPTDLTPATVTAPSSAAVEKVEGIAKTVQEMALGAEAASRQRAIFENSG--------------RKHQNLEQQQQKQ----QHLHAGA--------------MPVEGHAVA-----AQTAPAFRTGLSGLLKRLGSN--SLSSGQKEVGT 423 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig212.6461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig212.6461.1 >prot_L-elsbetiae_contig212.6461.1 ID=prot_L-elsbetiae_contig212.6461.1|Name=mRNA_L-elsbetiae_contig212.6461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=614bp MCTAVVPGVGSGWEANIARLIDQANETLCSSAYLRHANGDRTPSPHISHRback to top mRNA from alignment at L-elsbetiae_contig212:288..7187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig212.6461.1 ID=mRNA_L-elsbetiae_contig212.6461.1|Name=mRNA_L-elsbetiae_contig212.6461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6900bp|location=Sequence derived from alignment at L-elsbetiae_contig212:288..7187- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig212:288..7187- >mRNA_L-elsbetiae_contig212.6461.1 ID=mRNA_L-elsbetiae_contig212.6461.1|Name=mRNA_L-elsbetiae_contig212.6461.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3684bp|location=Sequence derived from alignment at L-elsbetiae_contig212:288..7187- (Laminarionema elsbetiae ELsaHSoW15)back to top |