mRNA_L-elsbetiae_contig21124.6435.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: D8LGV3_ECTSI (2OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV3_ECTSI) HSP 1 Score: 202 bits (514), Expect = 8.110e-62 Identity = 102/152 (67.11%), Postives = 115/152 (75.66%), Query Frame = 1 Query: 1 LQGGTGQLRFWPSLLTAAAHKRLFEELTLSPHLLPA-PMAGHGGGGSGGSWAEA-----KVGGAGEGRWMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 LQ GTG+LRFWPSLLT AA +RLFEELT+ P L P P AG + + GA GRWMQRPIKLFG+E+ QPRLTCFYGR G+SYRYSGKTLEATPW+ VPAI+E+L AA AAAG+ GYFNCVLLNWYRDGAD+MGWHS Sbjct: 53 LQSGTGKLRFWPSLLTDAAQRRLFEELTVDPDLRPLDPKAGSSXXXXXXXXXXSGNPGLREDGAARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAAAGAAAGVDPGYFNCVLLNWYRDGADYMGWHS 204
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A6EGN8_9SPHI (Alkylated DNA repair protein n=1 Tax=Pedobacter sp. BAL39 TaxID=391596 RepID=A6EGN8_9SPHI) HSP 1 Score: 97.8 bits (242), Expect = 1.110e-22 Identity = 46/83 (55.42%), Postives = 54/83 (65.06%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWH 435 W Q PIK+FGK VLQPR T FYG EG+SY YSG T+ A PW P + E+ A + A FN LLN+YRDG+D MGWH Sbjct: 40 WKQEPIKIFGKTVLQPRFTAFYGEEGVSYSYSGITMNALPW--TPELAEIRSAIQQKT---AHQFNACLLNFYRDGSDSMGWH 117
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A2M9AS22_9BACT (Alkylated DNA repair dioxygenase AlkB n=2 Tax=Hymenobacter chitinivorans TaxID=89969 RepID=A0A2M9AS22_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.970e-22 Identity = 57/121 (47.11%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 ELTLSPHLLPAPMAGHGGGGSGGSWAEAKVGGAGEGRWMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 E+ L LPAP+A E G A W Q PIKLFGK+VLQPRLT +YG G Y YSG T + PW PA++ + G EAA FN VLLN YRDG D MGWH+ Sbjct: 8 EVLLDTEFLPAPLAEQ-------LLTELTTGIA----WRQEPIKLFGKQVLQPRLTAWYGAAGAQYSYSGLTWQPLPW--TPALQRLRGQVEAACHTS---FNSVLLNLYRDGQDSMGWHA 112
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: UPI000DA67CBB (alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter sediminis TaxID=2218621 RepID=UPI000DA67CBB) HSP 1 Score: 96.7 bits (239), Expect = 3.120e-22 Identity = 47/84 (55.95%), Postives = 56/84 (66.67%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 W PIKLFG+EV+QPRLT ++G G SYRYSG L+ PW PA+ ++ G EAAAG FN VLLN YR G D MGWH+ Sbjct: 38 WKHEPIKLFGREVMQPRLTAWHGDAGASYRYSGLQLQPQPW--TPALLQLRGQVEAAAGAA---FNSVLLNLYRSGQDSMGWHA 116
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A7W9WD89_9BACT (Alkylated DNA repair dioxygenase AlkB n=1 Tax=Hymenobacter luteus TaxID=1411122 RepID=A0A7W9WD89_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.470e-21 Identity = 56/121 (46.28%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 76 ELTLSPHLLPAPMAGHGGGGSGGSWAEAKVGGAGEGRWMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 EL PH LP P A AE + G W PI+LFG+EV+QPRLT ++G G SYRYSG L+ PW PA+ + EAAAG FN VLLN YR G D MGWH+ Sbjct: 5 ELLFDPHFLPLPAAQT-------LLAELR----GSIAWKHEPIRLFGREVMQPRLTAWHGDAGASYRYSGLQLQPQPW--TPALLRLRQQVEAAAGA---RFNSVLLNLYRSGQDSMGWHA 109
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A238YUV9_9BACT (Alkylated DNA repair dioxygenase AlkB n=2 Tax=Hymenobacter TaxID=89966 RepID=A0A238YUV9_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.820e-21 Identity = 47/84 (55.95%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 W Q PIKLFGKEVLQPRLT ++G YRYSG LE +PW PA+ ++ EAA+G FN VLLN YR G D MGWH+ Sbjct: 38 WKQEPIKLFGKEVLQPRLTAWHGDAQARYRYSGLALEPSPW--TPALEQLRNRVEAASGT---QFNSVLLNLYRTGQDSMGWHA 116
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A431U9K3_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=Hymenobacter gummosus TaxID=1776032 RepID=A0A431U9K3_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 2.560e-21 Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 W PIKLFGKEVLQPRLT +YG G +YRYSG T++ PW PA++++ E A A FN VLLN YR G D MGWH+ Sbjct: 38 WRHEPIKLFGKEVLQPRLTAWYGDAGAAYRYSGLTMQPEPW--TPALQQLRRRVETAC---AAAFNSVLLNLYRHGQDSMGWHA 116
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A7G7W6W7_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=3 Tax=Bacteria TaxID=2 RepID=A0A7G7W6W7_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 2.620e-21 Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 W Q PIKLFGKEV+QPRLT +YG Y+YSG LE PW PA+ + EAA G +FN VLLN YR G D MGWH+ Sbjct: 38 WRQEPIKLFGKEVMQPRLTAWYGDPSARYQYSGLALEPYPW--TPALERLRSQVEAATGT---HFNSVLLNLYRSGQDSMGWHA 116
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A0K0XWM5_9GAMM (DNA methylase n=1 Tax=Wenzhouxiangella marina TaxID=1579979 RepID=A0A0K0XWM5_9GAMM) HSP 1 Score: 94.0 bits (232), Expect = 4.320e-21 Identity = 47/84 (55.95%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 W QRPIKLFG+EVLQPRLT F+G GISY YSGK L AT W +LG G FN VL N YR+G D MGWH+ Sbjct: 51 WQQRPIKLFGREVLQPRLTAFHGEPGISYAYSGKRLSATGWPE-----PLLGLVRRLNERLGGGFNSVLCNLYRNGQDSMGWHA 129
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Match: A0A7L4ZZ11_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter busanensis TaxID=2607656 RepID=A0A7L4ZZ11_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 4.970e-21 Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 187 WMQRPIKLFGKEVLQPRLTCFYGREGISYRYSGKTLEATPWERVPAIREVLGAAEAAAGLGAGYFNCVLLNWYRDGADHMGWHS 438 W Q PI+LFGKEVLQPRLT ++G EG +Y+YSG L PW PA++ + E AAG FN VLLN YR G D MGWH+ Sbjct: 38 WRQEPIRLFGKEVLQPRLTAWHGDEGAAYQYSGLRLSPAPW--TPALQALRQRVEQAAGTS---FNSVLLNLYRSGQDSMGWHA 116 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21124.6435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig21124.6435.1 >prot_L-elsbetiae_contig21124.6435.1 ID=prot_L-elsbetiae_contig21124.6435.1|Name=mRNA_L-elsbetiae_contig21124.6435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp LQGGTGQLRFWPSLLTAAAHKRLFEELTLSPHLLPAPMAGHGGGGSGGSWback to top mRNA from alignment at L-elsbetiae_contig21124:531..2091+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig21124.6435.1 ID=mRNA_L-elsbetiae_contig21124.6435.1|Name=mRNA_L-elsbetiae_contig21124.6435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1561bp|location=Sequence derived from alignment at L-elsbetiae_contig21124:531..2091+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig21124:531..2091+ >mRNA_L-elsbetiae_contig21124.6435.1 ID=mRNA_L-elsbetiae_contig21124.6435.1|Name=mRNA_L-elsbetiae_contig21124.6435.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig21124:531..2091+ (Laminarionema elsbetiae ELsaHSoW15)back to top |